FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807792

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807792
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences120809
Sequences flagged as poor quality0
Sequence length150
%GC36

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT86267.1401965085382715No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG79096.546697679808624No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA52114.313420357754803No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA50624.190085175773328No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG48944.051022688706967No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA47553.9359650357175378No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA31762.6289432078735855No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT27912.310258341679842No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG22921.8972096449767815No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA19801.6389507404249684No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA18921.5661084852949698No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG18311.5156155584434934No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA15401.2747394647749755No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAACATTAGCTTAGTTAATTAGGGA14361.1886531632577044No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT14291.1828588929632726No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG12661.0479351703929343No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA12050.9974422435414579No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC10900.9022506601329371No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA10450.8650017796687334No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA9750.8070590767244163No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC8530.7060732230214637No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC8080.6688243425572598No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT7760.6423362497827149No Hit
CATAGATGCTTCTGATATGTTGCCGTAGAATTTGCAAATACAGAATCAGT7160.5926710758304431No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA6730.5570777011646483No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAATTTGCAAATACAGAATCAGTGA6590.5454891605757849No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA6540.5413503960797623No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT6350.5256230909948761No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCAAACTAACACAGAAACAGAAA5560.46023061195771836No Hit
CATAGACCTGTGTGTGAGGCATTGTTGGTGGAGGGCTTTGCTGTTTCTAT5460.4519530829656731No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACATAGAACAGCTAAAAATC5280.4370535307799916No Hit
CATAGAGAACAGCCCTGAGAGAATGCCTCTTGTAGAAGGGATGGTCTATG4900.40559892061021946No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT4710.38987161552533334No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCCTCATTATCCCTGTGCCT4640.38407734523090165No Hit
CATAGACCTGTGTGTGAGGCATTGTTCCTTGGAGAGAAATGCTGCTCTAT4470.3700055459444247No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG4460.36917779304522014No Hit
CATAGACAGCTGGGGTGGGAGGTTAGCACATAGAACAGCTAAAAATCTTG4040.3344121712786299No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGGTGGGGAAAGAGAGCACT4020.3327566654802208No Hit
CATAGAGAACAGCCCTGAGAGAATGCTACCGTACTCGAGGCAGAGGACAG4020.3327566654802208No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG3910.323651383588971No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGAATTTGCAAATACAGAATCAGTG3880.32116812489135743No Hit
CATAGATGCTTCTGATATGTTGCCGTAAGAACATTAGCTTAGTTAATTAG3670.3037853140080623No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT3520.29136902051999436No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG3490.2888857618223808No Hit
CATAGATGATCCATCTACCTCTGCTTCATGAGGGTGGGGAAAGAGAGCAC3480.28805800892317623No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA3430.2839192444271536No Hit
CATAGATCATGGGACTTCAGCATGGCTGAGAAAGGAGGATCACTCTATGA3390.28060823283033554No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTCGAGGCAGAGGACAGGTATCT3390.28060823283033554No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG3370.2789527270319264No Hit
CATAGACTCTGTTTTGCTACCTGGGGGCTGGTCATTCTTCTCTGGGGGCT3370.2789527270319264No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAAGACCAAAGCTAGAAACTCC3350.27729722123351735No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT3340.27646946833431285No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT3190.2640531748462449No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTGCTGAGATTGGCCTGTGTCT3080.2549478929549951No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACAGAACATTAGC3050.2524646342573815No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTGTTCACTCTGATGGTACTTCT3050.2524646342573815No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTGGAGAGAAATGCTGCTCTAT3040.25163688135817697No Hit
CATAGACTCTGTTTTGCTACCTGGGGAGAGGAGGGGGCAGAATATCTATG2920.24170384656772262No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA2920.24170384656772262No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG2880.23839283497090447No Hit
CATAGATGCTTCTGATATGTTGCCGTAAGAACAGCTAAAAATCTTGGAGC2800.23177081177726827No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA2730.22597654148283655No Hit
CATAGAGCCTCCACTCTTCTCGCTATCTAGCCTGTTCACTCTGATGGTAC2720.225148788583632No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTACACTGACGACATGTGTGAG2710.2243210356844275No Hit
CATAGATGTGGTCTCAGTGCCCTATGACTCCCTCATTATCCCTGTGCCTC2710.2243210356844275No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATAGAGAACAGCTAAAAATCTT2610.2160435066923822No Hit
CATAGACCTGTGTGTGAGGCATTGTTCTGCTGAGATTGGCCTGTGTCTAT2610.2160435066923822No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAGGCTGAGAAAGGAGGATCACTC2570.2127324950955641No Hit
CATAGACCTGTGTGTGAGGCATTGTTCCAGATCCTTGTCAACTCTTGGTC2550.21107698929715502No Hit
CATAGAAGGTAGGGTACTATTGATTAGAAAAGTAACACTGCCTCTTGTAG2540.2102492363979505No Hit
CATAGATGCCTCAAAGAGCTGAAGACATGTGTGAGAGGGAAGGACTCTAT2510.20776597770033692No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG2400.19866069580908707No Hit
CATAGAAGGAGCTGGACTGGATGGACTCACATGTGTGAGAGGGAAGGACT2390.19783294290988254No Hit
CATAGAATACAACACACTCTCTGCCCTGATGCTCAGATCTCAAAAGGCTT2390.19783294290988254No Hit
CATAGATGTGCCACATACCTTTCCCAACACTGCCTCTTGTAGAAGGGATG2350.19452193131306442No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTACACATAGAACAGCTAAAAA2340.19369417841385989No Hit
CATAGAATACAACACACTCTCTGCCCTGCCTCTTGTAGAAGGGATGGTCT2320.19203867261545082No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATAGGGTGGGGAAAGAGAGCACTC2280.18872766101863273No Hit
CATAGACAGCTGGGGTGGGAGGTTAGAACACATGTGTGAGAGGGAAGGAC2270.1878999081194282No Hit
CATAGAGGATCCCCTGACATTTTGGTTGTGTACAGGTGCAAATTGTCAGT2240.1854166494218146No Hit
CATAGACCTGTGTGTGAGGCATTGTTCAGACATGTGTGAGAGGGAAGGAC2210.182933390724201No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTGGAGAGAAATGCTGCTCTAT2170.1796223791273829No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA2170.1796223791273829No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTAATGGAGGAGTATGGGATC2130.17631136753056478No Hit
CATAGATGCTTCTGATATGTTGCCGTACACATAGATGCTCAGATCTCAAA2120.17548361463136022No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAAACTTAGCAACCTGTACATT2090.17300035593374666No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACAACTGGCATCTGGTGA2080.17217260303454213No Hit
CATAGACCCCATGTGCAGTGTAAGCTGAGAAAGGAGGATCACTCTATGAG2070.1713448501353376No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACCAAAGCTAGAAACTCCCA2070.1713448501353376No Hit
CATAGAATACAACACACTCTCTGCCCTGGTGGAGGGCTTTGCTGTTTCTA2040.168861591437724No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTATGCAGCAACAAAAGTCACTCCT2030.1680338385385195No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTCATCACAGTGAAACAAGATC2000.1655505798409059No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCCCTCATTATCCCTGTGCCTCTAT1960.16223956824408778No Hit
CATAGATGTGCCACATACCTTTCCCAACACTGACGACAGTGAAACAAGAT1950.16141181534488325No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGCACAACTGGCATCTGGTGA1930.15975630954647418No Hit
CATAGAGCCTCCACTCTTCTCGCTATCACACGGACTACAAGTACCCACCA1910.15810080374806512No Hit
CATAGAGAACAGCCCTGAGAGAATGCAGAGAACAGCTAAAAATCTTGGAG1910.15810080374806512No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTGTAGGGTGGGGAAAGAGAGCACT1890.15644529794965606No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTATGTGACAGTGAAACAAGAT1880.15561754505045153No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATTTACTGACATGGGCAATTCG1870.15478979215124702No Hit
CATAGACGGGCCAGAGAATAGTGCTAGCACATAGAGGGTGGGGAAAGAGA1870.15478979215124702No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG1860.1539620392520425No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTCAGAACAGCTAAAAATC1850.15313428635283793No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT1840.15230653345363343No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACTGACGACATGTGTGAGAGGG1830.1514787805544289No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCCTGTTCACTCTGATGGTACTT1820.15065102765522434No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG1820.15065102765522434No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCAGATCTCAAAAGGCTTCTATGA1780.14734001605840624No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACACATAGAACAGCTAA1760.14568451025999718No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCACAACTGGCATCTGGTGATCT1750.14485675736079265No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTGGTGGAGGGCTTTGCTGTTTC1730.1432012515623836No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCACATAGAACAGCTAAA1730.1432012515623836No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT1710.14154574576397452No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGGCACAACTGGCATCTGGT1670.13823473416715643No Hit
CATAGATGATCCATCTACCTCTGCTTCAGTGTGGAGAGGAGGGGGCAGAA1660.1374069812679519No Hit
CATAGATTTGTGTGAGAAGGAGCAAGATCGTGCCTCTTGTAGAAGGGATG1650.13657922836874736No Hit
CATAGACGGGCCAGAGAATAGTGCTAGGCACAGGGTAATGGAGGAGTATG1630.1349237225703383No Hit
CATAGACCTGTGTGTGAGGCATTGTTGCCTCTTGTAGAAGGGATGGTCTA1620.13409596967113377No Hit
CATAGATGCTTCTGATATGTTGCCGTATAGATGCTCAGATCTCAAAAGGC1620.13409596967113377No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGTGCAAATTGTCAGTGTGTC1600.1324404638727247No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGAACAGCTAAAAATCTTGGAGCTC1570.12995720517511114No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTATGGTGGAGGGCTTTGCTGTT1560.1291294522759066No Hit
CATAGACCTGTGTGTGAGGCATTGTTATAGACATGTGTGAGAGGGAAGGA1540.12747394647749755No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGACCAAAGCTAGAAACTCCC1510.12499068777988395No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACTGACGACATGTGTGAGAGGG1510.12499068777988395No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA1490.1233351819814749No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAAGGGTGGGGAAAGAGAGCAC1490.1233351819814749No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACACATAGAACAGCTAAAAA1470.12167967618306583No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTATGGGCTGAGAAAGGAGGAT1470.12167967618306583No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACACTGACGACATGTGTGAGA1450.12002417038465678No Hit
CATAGAGGATCCCCTGACATTTTGGTTGGACTTGGTCTGCTGAGATTGGC1420.11754091168704318No Hit
CATAGAACATCTACAGAACTCTCTACCCATCTATGAGACCAAAGCTAGAA1410.11671315878783864No Hit
CATAGACCTGTGTGTGAGGCATTGTTAGGACACTTTGGACTCTGCCTCTA1410.11671315878783864No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAAAGGGTAATGGAGGAGTATG1410.11671315878783864No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTCTAACTTCATAGCACATCATG1400.11588540588863414No Hit
CATAGAGAACAGCCCTGAGAGAATGCAGCAACAAAAGTCACTCCTCTATG1380.11422990009022507No Hit
CATAGAGCCTCCACTCTTCTCGCTATCACACTGACGACATGGTGGAGGGC1360.112574394291816No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCTCTATGAGACCAAGTCTCTGC1360.112574394291816No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTACATGTGTGAGAGGGAAGGAC1350.11174664139261148No Hit
CATAGAGCTTTAAGACCTGTCAGTGACGGAGATAGAGAGGTTGGTTCTAT1340.11091888849340695No Hit
CATAGACCCCATGTGCAGTGTAAGCTACCGTATACGGACTACAAGTACCC1330.11009113559420242No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAATGGCTCACACCTATAATCCCA1330.11009113559420242No Hit
CATAGATGTGCCACATACCTTTCCCACACTGACGACATGTGTGAGAGGGA1310.10843562979579335No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGTAGGGTGGGGAAAGAGAGCA1300.10760787689658882No Hit
CATAGACCCCATGTGCAGTGTAAGCTCATAGAGGCACAGGGTAATGGAGG1270.10512461819897526No Hit
CATAGACAGCTGGGGTGGGAGGTTAGCTGGTGGAGGGCTTTGCTGTTTCT1240.10264135950136166No Hit
CATAGATGCTTCTGATATGTTGCCGTACGGAGATAGAGAGGTTGGTTCTA1230.10181360660215713No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)