FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807794

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807794
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences136021
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2585719.00956469956845No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC73645.4138699171451465No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC61344.509597782695319No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT40112.9488093750229742No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA32402.3819851346483265No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG32022.3540482719580065No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA25411.8680938972658636No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA24811.8239830614390427No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA24701.815896074870792No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT24161.7761963226266533No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA23421.7217929584402407No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC18831.3843450643650612No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA18221.3394990479411266No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA16901.2424552091221208No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA16611.2211349718058242No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT15211.1182096882099086No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT13931.0241065717793576No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG12260.9013314120613729No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCTCTA11000.808698656825049No Hit
CATAGACAGGGAGGCGTATAAGTGATGACTGATACAGGAAGGCCTTTCTA10770.7917895030914344No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCTCTA9550.7020974702435653No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGCACAGATCATTTAAGCTCAA9060.6660736209849949No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT8830.6491644672513803No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGAGACAGCCGC8060.5925555612736269No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG7910.5815278523169216No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT6120.4499305254335727No Hit
CATAGACAGGGAGGCGTATAAGTGATGGAGACAGCCGCTCACCTCTATGA4910.36097367318281737No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT4800.35288668661456685No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT4180.30730548959351867No Hit
CATAGAAACCCCAAAGGCTATGTTCATTCTATGCCTTCATTCTGCCTGCA3900.2867204328743356No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATATCCCCAGAAATGTTAGCA3840.28230934929165347No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGTGGTGTGGTG3760.2764279045147441No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG3620.2661353761551525No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTATCCCCAGAAATGTTA3500.2573132089897884No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA3420.2514317642128789No Hit
CATAGATCATGGGACTTCAGCATGGCCTTAAATGACCTTCTCTTCTGTCT3380.24849104182442416No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGTGTGGAGACAGCCGCTCAC3190.2345226104792642No Hit
CATAGAGCTGGCTTCCTAACTTCCAATAAATGGGGGCAAGGAAGTCTATG3180.23378742988215054No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGCCCTTTTTGTGTGCTTCTTTC3140.23084670749369585No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA3110.2286411657023548No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGCGTATTCTAAATATACAATCA3090.2271708045081274No Hit
CATAGATGTCCATCATGTGGAAGCTGGAGACAGCCGCTCACCTCTATGAG2950.2168782761485359No Hit
CATAGATGTCCATCATGTGGAAGCTGCTTCCTTCTGCTGGCTATTCTATG2820.20732092838605803No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTTGTATTTTTAGTGGAGA2680.19702840002646652No Hit
CATAGAGCTGGCTTCCTAACTTCCAACAATGGGCAAGCAATGACAGTCTA2630.19335249704089807No Hit
CATAGATCCCATCCAATAATAATGAGCATCCTTTCCCTCACTCTCTCCAT2610.19188213584667074No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGT2460.18085442688996553No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT2440.17938406569573817No Hit
CATAGACACCATGCCTGGCTAATTTTAAAATTAGTACCTATAATCTCAGC2420.1779137045015108No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCGTAG2410.17717852390439712No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTTTGCGTTTTTAGTAGAG2390.17570816271016976No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTATCCCCAGAAATGTTAG2330.17129707912748765No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT2300.16909153733614662No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA2280.16762117614191926No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCCATCTCTA2260.1661508149476919No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGTGTACCTGATTGGCCATTT2240.16468045375346455No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAATCCCATCTCTA2230.16394527315635085No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTTGTATTTTTAGTAGAGA2220.16321009255923716No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTGGAGACAGCCG2190.16100455076789613No Hit
CATAGAACCTCTTTTGGGGCAAAGTTCTGGAGACAGCCGCTCACCTCTAT2140.15732864778232775No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCTTGACTCCACTAAAAATA2070.15218238360253195No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCCCATCTCTACTAAAAATA2030.14924166121407725No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATAGTGAAACCCCATCTCTA1990.1463009388256225No Hit
CATAGATCATGGGACTTCAGCATGGCTATGCAATCTGTGAGTTGCTGATG1760.12939178509200785No Hit
CATAGATGTCCATCATGTGGAAGCTGCCTTCCTAACCATGGGCATATCTA1680.12351034031509839No Hit
CATAGATCCTCTCATTGTCCAGTTTGGCCTTTCCCTCACTCTCTCCATCT1670.12277515971798472No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTAATCCCAGCTACTCAGG1670.12277515971798472No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1630.11983443732952999No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGTCGTATCCCCAGAAATGTTAG1580.11615853434396159No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGTCTGTTATTCAAAGGTT1580.11615853434396159No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACTCCATCTCTA1540.11321781195550687No Hit
CATAGAGCTGGCTTCCTAACTTCCAAACAATGGGCAAGCAATGACAGTCT1520.11174745076127951No Hit
CATAGATCATGGGACTTCAGCATGGCCAATATGGTGAAACCCTGTCTCTA1500.11027708956705215No Hit
CATAGATCATGGGACTTCAGCATGGCCAATATGGTGAAACCCCATCTCTA1480.10880672837282478No Hit
CATAGACACCATGCCTGGCTAATTTTTTTGTGTTTTTGGTAGAGATGGGG1480.10880672837282478No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTGGAGACAGCCGC1460.10733636717859742No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCTGTCTCTA1440.10586600598437007No Hit
CATAGATGTCCATCATGTGGAAGCTGCTCACCTCTATGAGACCAAGTTGG1430.10513082538725638No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACTCTGTCTCTA1430.10513082538725638No Hit
CATAGATCATGGGACTTCAGCATGGCCAAGATGGTGAAACCCCGTCTCTA1420.10439564479014271No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCCATCTCTA1400.10292528359591532No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1390.10219010299880166No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTT1380.10145492240168796No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)