FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807796

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807796
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences77666
Sequences flagged as poor quality0
Sequence length150
%GC35

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC45345.837818350372107No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC37214.791028249169521No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA30563.9347977235856106No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA29293.771277006669585No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA22972.9575361161898384No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA22922.9510982926892075No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA17872.3008781191254863No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT16602.137357402209461No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA16352.1051682847063065No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG14431.8579558622820798No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT13461.7330620863698403No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG12341.5888548399557076No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG9361.2051605593181058No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC8611.1085932068086422No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA8431.085417042206371No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT8261.0635284423042257No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA8041.03520201890145No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC7450.9592357015940051No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT6650.8562305255839107No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG6620.8523678314835321No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG6490.8356294903818917No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA6490.8356294903818917No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG6250.8047279375788634No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC6200.7982901140782324No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGTGGTGCTGGAACTAGTTCTATG6000.7725388200757087No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT5530.7120232791697783No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA5400.695284938068138No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG5230.6733963381659929No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA4990.6424947853629644No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT4820.6206061854608194No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT4620.5948548914582957No Hit
CATAGATGCACCAGAAGCCACCTACCGTAGAACAAGGGCATGGTCAAGTG4550.5858419385574125No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC4540.5845543738572864No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGGAATTAGAGCCAGTTCTG4420.5691035974557721No Hit
CATAGACCCACTTACACACACAGGTTTACACTGACGACAATGGGCACACT4220.5433523034532486No Hit
CATAGATTTGGCACTCACATACACGCTCTCTTCCGCCTTTATCCTTCTAT4210.5420647387531223No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT4050.5214637035511035No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTGGGGGAAGAGAAACAGAATC3930.5060129271495892No Hit
CATAGAGCATCCTCGTAATAGCAAACATTTGGGGGAAGAGAAACAGAATC3580.4609481626451729No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT3560.45837303324492057No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG3500.4506476450441635No Hit
CATAGACAGTCCTGCCGTGTACATGTACAAACCAAACAATAGCCAGTCTA3420.440347127443154No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTACCGTAGGATGACTTATGGAA3400.4377719980429016No Hit
CATAGACCCCCATGCAACCACATCTATACTCCAGTCTCGGCAACAAGTCT3360.43262173924239694No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT3220.4145958334406304No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT3150.4055828805397471No Hit
CATAGATCATGAATGACTCCCACTCTGGTGGTGCTGGAACTAGTTCTATG3140.404295315839621No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACTGGTGGTGCTGGAACTAG3100.3991450570391162No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA3000.38626941003785437No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA2930.37725645713697115No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA2820.36309324543558313No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGTGGTGCTGGAACTAGTTCTAT2740.35279272783457366No Hit
CATAGACCCCCATGCAACCACATCTATACAATGGGCACACTTAACACCTC2690.3463549043339428No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC2660.34249221023356424No Hit
CATAGAACTTGTGCTTTTGGTGTCACAACTGACGACAATGGGCACACTTA2660.34249221023356424No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT2620.3373419514330595No Hit
CATAGACCATGTAATACCATCGTGAGCAGGAAAATGTCAGTGGGCCATCT2600.33476682203280717No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA2590.33347925733268097No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT2510.3231787397316715No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG2500.32189117503154535No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTTGGGGGAAGAGAAACAGAAT2420.3115906574305359No Hit
CATAGACAGAACACCACACCCCTGTCCTTAGGAGTTCTGGCCCCTGTCTA2340.30129013982952646No Hit
CATAGATTTGGCACTCACATACACGCTGACATCCCAACCACACGTCTATG2310.29742744572914787No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCACAGCCCAGTTTTCCTTCTCT2300.29613988102902167No Hit
CATAGAATTCCCCAATGTCCTTGCACACCATGGATCTATGAGACCAAGTC2290.2948523163288955No Hit
CATAGATGCACCAGAAGCCACCTACCGTATCACTTGATCATCCATTGTCT2290.2948523163288955No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCCCCTTTACCTACCTTCTCAGCT2240.2884144928282646No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA2230.28712692812813845No Hit
CATAGACCCACTTACACACACAGGTTTGGGGGAAGAGAAACAGAATCTAT2190.2819766693276337No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA2090.2691010223263719No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA2080.2678134576262457No Hit
CATAGATCATGAATGACTCCCACTCTGCGAACAAGGGCATGGTCAAGTGT2060.26523832822599336No Hit
CATAGACCCCCATGCAACCACATCTAGCTGACATCCCAACCACACGTCTA2010.2588005047253625No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA1960.25236268122473154No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGAACAGGGAGATGTTCTAT1950.25107511652460535No Hit
CATAGAGCAGTGCAGCAGAAGATAGCCTTCTCTGATACCATCCCTCTATG1930.24849998712435298No Hit
CATAGATGCACCAGAAGCCACCTACCGTGGGAGGAACAGGGAGATGTTCT1930.24849998712435298No Hit
CATAGAATCCCTGCCCTTGACCTTGGCTCTCTTCCGCCTTTATCCTTCTA1870.2407745989235959No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGAAGGGCAAGTGTATGGTCAG1850.23819946952334356No Hit
CATAGACCATGTAATACCATCGTGAGCAGATCTAGGAAAATGTCAGTGGG1830.2356243401230912No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA1790.23047408132258645No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCTGGCAAAAGGGTAAGAGTT1730.22274869312182938No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT1710.220173563721577No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA1700.2188859990214508No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGGGCAAGTGTATGGTCAGTTCT1690.21759843432132467No Hit
CATAGATCATGAATGACTCCCACTCTGTTTGGGGGAAGAGAAACAGAATC1650.2124481755208199No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGTGAAAAGTAGGGGACAGTTCT1620.20858548142044137No Hit
CATAGATCATGAATGACTCCCACTCTGGTGAAAAGTAGGGGACAGTTCTA1620.20858548142044137No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGGGCAAGTGTATGGTCAGT1600.206010352020189No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGTGTACAGCCTACATCCCT1580.20343522261993666No Hit
CCCGTAATCCCTCCCTTTTCTATGAGACCAAGTCTCTGCTACCGTAATCG1560.2008600932196843No Hit
CATAGACCCCCATGCAACCACATCTAGTCACTCAAATATAGACCTCAACC1530.19699739911930575No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT1510.19442226971905338No Hit
CATAGAGCATCCTCGTAATAGCAAACATTGGTGAAAAGTAGGGGACAGTT1490.191847140318801No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA1480.19055957561867484No Hit
CATAGATCATGAATGACTCCCACTCTGACATCCCAACCACACGTCTATGA1450.18669688151829628No Hit
CATAGATCTGCTCACCTAAATTTCGTTCAGTGTACAATGGGCACACTTAA1420.18283418741791774No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT1400.1802590580176654No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGCTGGTGGTGCTGGAACTA1380.17768392861741303No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGGATGACTTATGGAATCTG1370.17639636391728683No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA1350.1738212345170345No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGTGGAACAAGGGCATGGTCAA1340.1725336698169083No Hit
CATAGAATCCCTGCCCTTGACCTTGGCCCTTTTGCCAAGATTGTAGGAGT1330.17124610511678212No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGATACTGGGAGGAACAGGGAGA1310.16867097571652975No Hit
CATAGACCATGTAATACCATCGTGAGCAGATCCCTGGCAAAAGGGTAAGA1310.16867097571652975No Hit
CATAGAAGGGCAATTATCTCATCCTAGACAGGGCAAGTGTATGGTCAGTT1270.16352071691602504No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCAAACAGAATGGGACCCATCTAT1240.15965802281564648No Hit
CATAGATTTGGCACTCACATACACGCCTAAACAAGCACATTATTATTGGT1230.1583704581155203No Hit
CATAGATGTGTGAGAGAGGGAGAGACATGTCGTGGGAGGAACAGGGAGAT1220.15708289341539414No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACATCGGCCGCACTGAAATT1220.15708289341539414No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGACAATGGGCACACTTAACACC1200.15450776401514174No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGCTCTCTTCCGCCTTTATC1180.1519326346148894No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGGAATTAGAGCCAGTTCT1170.15064506991476323No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA1170.15064506991476323No Hit
CATAGACCCCCATGCAACCACATCTATGGGAGGAACAGGGAGATGTTCTA1160.14935750521463703No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTATTTGGGGGAAGAGAAACAG1160.14935750521463703No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTATGGGAGGAACAGGGAGATG1150.14806994051451083No Hit
CATAGAACCCTGCTTCCTAAATCAACAAGGGCATGGTCAAGTGTCTATGA1140.1467823758143847No Hit
CATAGACCCCCATGCAACCACATCTATGAGACCAAGCCCCTTTACCTACC1110.14291968171400612No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACCAAGTCTCTTAGGAGT1090.14034455231375378No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC1050.13519429351324905No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC1040.13390672881312285No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGAGGAACAGGGAGATGTTCTA1030.13261916411299668No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGGCAAGTGTATGGTCAGTT1010.13004403471274434No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAAGTATATGACACATTACACC990.12746890531249194No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGGAAAATGTCAGTGGGCCA990.12746890531249194No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACCGTACTGGTGGTGCTGGAACT990.12746890531249194No Hit
CATAGAATCCCTGCCCTTGACCTTGGCATTTAAATGTTAGCTGTCTCAGA970.12489377591223959No Hit
CATAGAGCACCCAACTATCCTTCAGCACCACAGCCCAGTTTTCCTTCTCT970.12489377591223959No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGACCCTCCCCTTTACCTACCTT950.12231864651198723No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTATGAGAC920.11845595241160868No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGAGACCAAGTCTCTGCTACCG920.11845595241160868No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGGTGAAAAGTAGGGGACAGTT910.1171683877114825No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTGTGATTGTCCTGGTCTATGA880.11330569361110394No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGTCTCTGCGAAC880.11330569361110394No Hit
CATAGATGGCATGTCACTTCCTCAGAACACTGACGACCTTTTAGCTATTA870.11201812891097779No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA850.1094429995107254No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA840.10815543481059924No Hit
CATAGAAGGGCAATTATCTCATCCTAGACAGAAGGGCAAGTGTATGGTCA840.10815543481059924No Hit
CATAGAGAAAGGCAGGCGAAGTTAGCCTTCTCTGATACCATCCCTCTATG830.10686787011047305No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGAGACCAAGTCAGGAATTAGA830.10686787011047305No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGGGAGATGTACAAGCACATTATT810.10429274071022068No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC800.1030051760100945No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGTCTCTGCTACC800.1030051760100945No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTCTCTTCCGCCTTTATCCTTCTAT790.10171761130996833No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)