FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807801

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807801
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences81624
Sequences flagged as poor quality0
Sequence length150
%GC38

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG65047.968244633931197No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT58467.162109183573459No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT54256.646329510928159No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG39854.882142507105753No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT26833.2870234244829954No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT25953.1792119964716257No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT22992.8165735567970205No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT16952.0765951190826226No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT15171.858522003332353No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG12071.4787317455650297No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT11331.3880721356463785No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT11181.369695187689895No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT11081.3574438890522396No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG9971.2214544741742626No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT9801.200627266490248No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT9611.1773497990787023No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT8621.056061942565912No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC8401.0291090855630698No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC8211.0058316181515239No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG7840.9605018131921984No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG7670.9396746055081839No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT7270.8906694109575616No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG6950.8514652553170635No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT6440.7889836322650201No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG6350.77795746349113No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA6150.7534548662158189No Hit
CATAGACAATTTCAGTGCGGCCGATGGGTCCCAAAGTAGGCAATTCTATG6150.7534548662158189No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTAGGTGGCTTCTGGTGCAT5930.7265020092129766No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG5570.6823973341174164No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT5560.6811722042536509No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC5330.6529942173870431No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTGCTATCTTCTGCTG4860.5954131137900618No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT4800.5880623346074685No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC4620.5660099970596884No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCACACTGCTCACGATGGTATTACA4550.5574340880133294No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG4480.5488581789669705No Hit
CATAGAAAAGGGAGGGATTACGGGTGTACGGTTGCAGGATGAATGGGGAC4240.519455062236597No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA4080.4998529844163481No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC4020.49250220523375476No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT3570.43737136136430466No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT3540.4336959717730079No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT3430.4202195432715868No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC3420.41899441340782123No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC3330.4079682446339312No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG3290.40306772517886896No Hit
CATAGAACTGTCCCCTACTTTTCACCATAGAACTTTCCCACCGCCCTTTT3070.37611486817602663No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT3030.3712143487209644No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGTTAGGCTACTTGGGGGTCTCT3010.3687640889934333No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT2800.3430363618543566No Hit
CATAGAGGGATGGTATCAGAGAAGGCTTACGGTTGCAGGATGAATGGGGA2640.3234342840341076No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA2610.3197588944428109No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT2590.3173086347152798No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT2580.31608350485151426No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT2540.311182985396452No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT2520.3087327256689209No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA2490.3050573360776242No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC2330.2854552582573753No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2320.2842301283936097No Hit
CATAGAGTTCCAGCAAAATGAAGGGGGTCTCTATGTGTAGAGGAGTTGAC2240.27442908948348527No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG2180.2670783103008919No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC2030.2487013623444085No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA1960.2401254532980496No Hit
CATAGATGAAAACATTCCGAAGCTAGATCATACGGTAGCAGAGTGGGAGT1950.23890032343428405No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTACACTGTCCTCTTCACCTCC1950.23890032343428405No Hit
CATAGAGGCCCAGGAGAGTTGCTTAATGTTTGCTATTACGAGGATGCTCT1850.22664902479662846No Hit
CATAGATGAAAACATTCCGAAGCTAGATCAGTGTACATGTACACGGCAGG1830.22419876506909733No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGGGCAGTTAGGCTACTTGG1800.22052337547780065No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC1760.2156228560227384No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGACACTTGAAAGCTCCCT1590.19479564833872393No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGCCAGGCTAGGCCTCCAAGGCT1550.18989512888366167No Hit
CATAGACACTTGACCATGCCCTTGTTCTACGGTTGCAGGATGAATGGGGA1540.18866999901989612No Hit
CATAGATGAGGGATGTAGGCTGTACACATGTACACGGCAGGACTGTCTAT1530.18744486915613057No Hit
CATAGAGAAGGAAAACTGGGCTGTGGGTCCCAAAGTAGGCAATTCTATGT1520.186219739292365No Hit
CATAGATGGGTCCCATTCTGTTTGCAGTCTCATAGATGGGTCCCAAAGTA1510.18499460942859944No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTATGTGAGTGCCAAATCTATG1500.18376947956483386No Hit
CATAGAAGGGGTGATGCTCTGATGGATACGGTAGCAGAGCCGTTTCCCCC1470.18009408997353718No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC1430.17519357051847495No Hit
CATAGAAGAGAACCAAAAATGGACCCACCTAAACTCCTGAGATCCTCTAT1410.17274331079094382No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTAGATGTGGTTGCATGGGGGTCT1400.1715181809271783No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG1380.16906792119964717No Hit
CATAGAACCAACATCTTAATAGCTAAAAGGTCTGCTTTTACAAACTCAAG1380.16906792119964717No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG1340.16416740174458494No Hit
CATAGAGAAGGAAAACTGGGCTGTGGTACGGTAGGTGGCTTCTGGTGCAT1310.16049201215328823No Hit
CATAGACACTTGACCATGCCCTTGTTGACACTTGAAAGCTCCCTGGATCT1270.155591492698226No Hit
CATAGAACTCTTACCCTTTTGCCAGGTCTCATAGAACTTTCCCACCGCCC1230.15069097324316377No Hit
CATAGAACATCTCCCTGTTCCTCCCAGTTAGGCTACTTGGGGGTCTCTAT1230.15069097324316377No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT1210.14824071351563264No Hit
CATAGAACTGACCATACACTTGCCCTGCTGTCTCTCCCTCTCTCACACAT1210.14824071351563264No Hit
CATAGACCAGGACAATCACAGGGCACTACGGTTGCAGGATGAATGGGGAC1140.13966480446927373No Hit
CATAGAGTTCCAGCAAAATGAAGGGGACCTGAACGAAATTTAGGTGAGCA1080.13231402528668038No Hit
CATAGAACATCTCCCTGTTCCTCCCATACGGTTGCAGGATGAATGGGGAC1080.13231402528668038No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGAATCTAAAAGCAGCAAACAATT1060.12986376555914925No Hit
CATAGAACCAACCAATAATAATGTGCTTGTACACTGAACGAAATTTAGGT1040.12741350583161815No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGCCGGAAAACCTGTGTGTGTA1040.12741350583161815No Hit
CATAGACACTTGACCATGCCCTTGTTCCTCATAGACACTTGAAAGCTCCC1020.12496324610408703No Hit
CATAGATGGGTCCCATTCTGTTTGCATTCTTTCTCCAGACCTTCATCTAT980.1200627266490248No Hit
CATAGAACCTCAAGCCGGAAAACCTGTGTGTGTAAGTGGGTCTATGTGTA960.11761246692149367No Hit
CATAGACAGGGGCCAGAACTCCTAAGGACAGGGGTGTGGTGTTCTGTCTA950.11638733705772812No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGGTCTCATAGAACTTTCCCACCG940.11516220719396256No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC930.113937077330197No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT930.113937077330197No Hit
CATAGATGAGGGATGTAGGCTGTACACACATGTACACGGCAGGACTGTCT910.11148681760266588No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGACTAAAGCAGCAAACAA910.11148681760266588No Hit
CATAGATCCATGGTGTGCAAGGACAATACGGTAGCAGACACTTGAAAGCT900.11026168773890033No Hit
CATAGAGAAGCCAGGGAACAAAGTGGTACGGTTGCAGGATGAATGGGGAC860.10536116828383807No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)