FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807805

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807805
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences139480
Sequences flagged as poor quality0
Sequence length150
%GC41

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2481917.793948953254947No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT123588.860051620303986No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT85786.149985661026671No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG64584.630054488098652No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGAGAAGTGTATTAATTA50113.592629767708632No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACGGCAACATATCAGAAGCATCTA40892.931603097218239No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG39652.84270146257528No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA27561.975910524806424No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA26391.8920275308287926No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGGGTAGAGAGTTCTGTAGA24051.7242615428735304No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT22701.6274734728993403No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT22141.5873243475767136No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT20191.4475193576139949No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT20031.4360481789503872No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA17581.2603957556638945No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA17021.2202466303412676No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGGGTAGAGAGTTCTGTA16841.207341554344709No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA14131.0130484657298537No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA12610.9040722684255807No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA11700.8388299397763119No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT11680.8373960424433611No Hit
CATAGAAGTACCATCAGAGTGAACAGGCTACGGCAACATATCAGAAGCAT10190.7305706911385145No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG8810.6316317751648982No Hit
CATAGACGAATTGCCCATGTCAGTAAATCTACGATAGCGAGAAGAGTGGA8760.6280470318325208No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT7970.5714080871809578No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT7730.5542013191855463No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC7280.5219386291941497No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT6580.4717522225408661No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG6420.4602810438772584No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA6090.4366217378835675No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC5510.39503871522798967No Hit
CATAGAAACAGCAAAGCCCTCCACCAGATCTCAACACATCCGAAGGACAG5270.3778319472325781No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA5250.3763980498996272No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC4860.34843705190708346No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA4570.3276455405792945No Hit
CATAGATGAGTGTCCTTGTAGATGTGCATTCTCTCAGGGCTGTTCTCTAT4020.2882133639231431No Hit
CATAGATCCCATACTCCTCCATTACCCTCTAGCCAAATTCCTTACCGATC3950.28319472325781475No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG3560.255233725265271No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA3290.23587611127043304No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA3170.22727272727272727No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA3040.21795239460854604No Hit
CATAGACCACACACACAACTGAGAGGAGAATGATATTGTTGCAGATTTCT2980.21365070260969315No Hit
CATAGATATTCTGCCCCCTCCTCTCCTTCCACTACCCACCTGCCTCTATG2930.21006595927731572No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG2860.2050473186119874No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC2700.1935761399483797No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC2420.17350157728706625No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACATATCACGGCAACATATCAGAA2380.17063378262116433No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCA2320.16633209062231144No Hit
CATAGAGGTGAGCGGCTGTCTCCACCAAAACTACAAAACTTATCTGGGCA1930.1383710926297677No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA1780.1276168626326355No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGAAGTGTATTAATTATCTAT1760.12618296529968456No Hit
CATAGAAGCCTTTTGAGATCTGAGCATTCTCTCAGGGCTGTTCTCTATGT1750.12546601663320905No Hit
CATAGAAACAGCAAAGCCCTCCACCAGCACTTACTAACAAAGCGCTTCCT1720.12331517063378261No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAACTTATCTGGGCACG1620.11614568396902782No Hit
CATAGATGGGATTATAGGTGTGAGCCACAGCGCCTGGCCAAAAATTTCCA1580.1132778893031259No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGGGCACTGAGACCACATC1550.11112704330369946No Hit
CATAGATGGGATTATAGGTGTGAGCCACTACGCCTGGCCAAAAATTTCCA1530.1096931459707485No Hit
CATAGACACAGGCCAATCTCAGCAGAGACTTGGTCTCATAGACACAGGGC1520.10897619730427302No Hit
CATAGAGGTGAGCGGCTGTCTCCACCAAAAGTACCAAAACTTATCTGGGC1480.10610840263837108No Hit
CATAGATGGGATTATAGGTGTGAGCCATTGCGCCTGGCCAAAAATTTCCA1450.10395755663894464No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCACGCAGAGCCTTCAGGTCA1430.1025236593059937No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)