FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807806

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807806
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences204950
Sequences flagged as poor quality0
Sequence length150
%GC36

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC119945.852159063186143No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA105565.150524518175165No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA94144.593315442790924No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC80533.9292510368382536No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA69673.3993656989509637No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA60312.9426689436447915No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT59662.9109538911929738No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA50462.4620639180287873No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA46392.263478897292022No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG42192.058550866064894No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT35851.7492071236887046No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG29891.4584044888997316No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA28361.3837521346669919No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC23181.1310075628202No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA22441.0949011954135155No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT22041.075384240058551No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT21441.0461088070261038No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT20871.0182971456452794No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC20220.9865820931934619No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT19400.9465723347157843No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT18280.8919248597218834No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA16490.8045864845084167No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA15500.7562820200048792No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC15370.7499390095145158No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT14870.7255428153208099No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA14480.7065137838497194No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAGCATGAGAAGAATGGCCTCT14160.6909002195657478No Hit
CATAGAGTCATTCCAAACTGTGCACTTTGGGGGAAGAGAAACAGAATCTA13700.6684557209075385No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT13390.6533300805074409No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTATCTCAACTCCCAGCTCC13390.6533300805074409No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC12590.6142961697975116No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT11420.5572090753842401No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG10710.5225664796291779No Hit
CATAGACCCACTTACACACACAGGTTTAGACCCCTTTACCTACCTTCTCA10160.4957306660161015No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG9890.4825567211515004No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC9850.48060502561600393No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGAAGGGCAAGTGTATGGTCAG9510.46401561356428395No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG9130.44547450597706756No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA9060.4420590387899488No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACAGCCCAGTTTTCCTTCTCTAT8720.42546962673822886No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA8640.42156623566723594No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG8050.3927787265186631No Hit
CATAGAATCCCTGCCCTTGACCTTGGACACTGACACCCGTAATCCCTCCC7910.3859477921444255No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG7910.3859477921444255No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA7880.3844840204928031No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA7860.3835081727250549No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT7840.38253232495730666No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT7670.3742376189314467No Hit
CATAGACCCACTTACACACACAGGTTTACACTGACGACAATGGGCACACT7640.3727738472798244No Hit
CATAGATGCACCAGAAGCCACCTACCGTACTTAGGAGTTCTGGCCCCTGT7510.3664308367894608No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT7280.35520858746035616No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA7250.35374481580873385No Hit
CATAGATGCACCAGAAGCCACCTACCGTAGTGCCCTGTGATTGTCCTGGT6940.33861917540863623No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACCTTAGGAGTTCTGGCC6900.3366674798731398No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA6860.3347157843376433No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA6860.3347157843376433No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA6800.33178824103439863No Hit
CATAGATGCACCAGAAGCCACCTACCGTAGGGCAAGTGTATGGTCAGTTC6770.33032446938277626No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA6670.3254452305440351No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA6590.3215418394730422No Hit
CATAGAATCCCTGCCCTTGACCTTGGTCTGTCATAAAACAATGGGCACAC6400.312271285679434No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGATGACTTATGGAATCTGA6380.3112954379116858No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA6200.3025128080019517No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT6120.29860941693095877No Hit
CATAGAATTCCCCAATGTCCTGTGCAGATCTACTCCAGTCTCGGCAACAA5920.2888509392534765No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA5920.2888509392534765No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGAATTAGAGCCAGTTCTGA5590.27274945108563065No Hit
CATAGACCCCCATGCAACCACATCTATGTCATCGGCCGCACTGAAATTGT5430.26494266894364477No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGGAACAAGGGCATGGTCAAG5410.2639668211758966No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCCATCAGAGCATCACCCCTTCTAT5380.2625030495242742No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACCGTATCCATCAGAGCATCACC5270.25713588680165894No Hit
CATAGATTTGGCACTCACATACACGCTCTCTTCCGCCTTTATCCTTCTAT5250.2561600390339107No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC5200.25372041961454017No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA5080.24786533300805075No Hit
CATAGAATTGCCTACTTTGGGACCCATCGGCCGCACTGAAATTGTCTATG4910.23957062698219078No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACTGGTGGTGCTGGAACTAG4890.23859477921444253No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG4840.23615515979507196No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA4770.23273969260795313No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCCAAGTATATGACACATTACACCA4770.23273969260795313No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTAGAACAAGGGCATGGTCAAGTG4740.23127592095633082No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT4570.22298121493047085No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCAGCATCGGCCGCACTGAAATTGT4480.2185898999756038No Hit
CATAGAGCATCCTCGTAATAGCAAACATTTGCCAAGATTGTAGGAGTAGA4440.21663820444010737No Hit
CATAGATGCACCAGAAGCCACCTACCGTACTGGTGGTGCTGGAACTAGTT4410.215174432788485No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGGTGAAAAGTAGGGGACAGTT4410.215174432788485No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGGAAGGTTTTCCGGCTTGAGGTT4330.2112710417174921No Hit
CATAGATGCACCAGAAGCCACCTACCAGCATGAGAAGAATGGCCTCTATG4130.20151256404000975No Hit
CATAGAACTTTCAGTAATAGGGGACAAGAACAAGGGCATGGTCAAGTGTC4000.19516955354964624No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTGGTGGTGCTGGAACTAGTTCTA3910.19077823859477921No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT3900.1902903147109051No Hit
CATAGATGCACCAGAAGCCACCTACCGTAAGCCTTCTCTGATACCATCCC3850.18785069529153453No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACTTAGGAGTTCTGGCCCCT3760.18345938033666748No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT3750.18297145645279336No Hit
CATAGAGACCCCCAAGTAGCCTAACTGTGCCCTGTGATTGTCCTGGTCTA3660.17858014149792634No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACCTGGCAAAAGGGTAAGAG3610.17614052207855577No Hit
CATAGAATCCCTGCCCTTGACCTTGGCTGCCCTTGTCCTTGCACACCATG3520.17174920712368869No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTATGGGAGGAACAGGGAGATG3520.17174920712368869No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG3450.1683337399365699No Hit
CATAGACAGTCCTGCCGTGTACATGTGTACAGCCTACATCCCTCATCTAT3280.16003903391070992No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGCAAAAGGGTAAGAGTTCTATG3250.15857526225908758No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATCTGGGAGGAACAGGGAGATGT3170.15467187118809467No Hit
CATAGAATTCCCCAATGTCCTTGCACACCATGGATCTATGAGACCAAGTC3100.15125640400097584No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCAACAAGGGCATGGTCAAGTGTCT3080.1502805562332276No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGAACAGGGAGATGTTCTAT3060.14930470846547939No Hit
CATAGATGCACCAGAAGCCACCTACCCCTTTACCTACCTTCTCAGCTCTA3040.14832886069773116No Hit
CATAGAGAAAGGCAGGCGAAGTTAGCTGAGGTTCTTCAACACAGCTATTC2950.1439375457428641No Hit
CATAGAATCCCTGCCCTTGACCTTGGGTCCATTTTTGGTTCTCTTCTATG2920.14247377409124176No Hit
CATAGATCATGAATGACTCCCACTCTGTACTCCTACAATCCTGGCAAAAG2870.1400341546718712No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA2850.13905830690412294No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCATGGGAGGAACAGGGAGATGTTC2720.13271529641375945No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGAACAAGGGCAT2710.13222737252988534No Hit
CATAGAAGGGCAATTATCTCATCCTAGACCTACACATAGAAGGGCAAGTG2610.12734813369114417No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGGAAAATGTCAGTGGGCCA2590.12637228592339594No Hit
CATAGAATTGCCTACTTTGGGACCCAAGTATATGACACATTACACCAGTC2590.12637228592339594No Hit
CATAGAGCAGTGCAGCAGAAGATAGCCTTCTCTGATACCATCCCTCTATG2580.12588436203952183No Hit
CATAGATTTGGCACTCACATACACGCTGACATCCCAACCACACGTCTATG2520.12295681873627715No Hit
CATAGACCCCCATGCAACCACATCTATACAATGGGCACACTTAACACCTC2450.11954135154915832No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCAAACAGAATGGGACCCATCTAT2440.11905342766528422No Hit
CATAGACCATGTAATACCATCGTGAGCAGCACCCCTTCATTTTGCTGGAA2320.11319834105879482No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCCTTTACCTACCTTCTCAGCTC2290.11173456940717248No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC2280.11124664552329835No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACCGTACCAAGTATATGACACAT2270.11075872163942425No Hit
CATAGAGACCCCCAAGTAGCCTAACTGACATCCCAACCACACGTCTATGA2180.10636740668455721No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGAAGGGCAAGTGTATGGTCAG2170.10587948280068309No Hit
CATAGATCTGGGAGGTGAAGAGGACATAGATCTGGGAGGAACAGGGAGAT2150.10490363503293486No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACCAAGTCTTAGGAGTTC2130.10392778726518663No Hit
CATAGAAGGGCAATTATCTCATCCTAGACCTTTTAGCTATTAAGATGTTG2110.10295193949743839No Hit
CATAGATGTCCCCATTCATCCTGCAACAGGGCAAGTGTATGGTCAGTTCT2070.10100024396194193No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)