FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807808

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807808
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences88472
Sequences flagged as poor quality0
Sequence length150
%GC38

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1367815.460258612894476No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG49165.556560267655303No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA48025.427705940862646No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG39154.425128854326792No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA30793.4801971245139707No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG23732.6822045392892666No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT18732.1170539831811195No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA15561.7587485306085542No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA15371.7372728094764447No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC14961.6909304638755764No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA14331.6197214938059499No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT10841.2252464056424632No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCAACAGAGAAGTCAAGAGGAAA10661.2049009856225699No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA10431.178904060041595No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT9781.105434487747536No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA9281.0489194321367212No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACCAAAGCTAGAAACTCCCA9191.0387467221267745No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT8911.0070982909847184No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATAGAGAACAGCTAAAAATCTT7850.8872863730897912No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA7230.8172077041323809No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC7170.8104258974590831No Hit
CATAGAAGGTAGGGTACTATTGATTAGAAAAGTAGGTAGGGTAATGGAGG6930.7832986707658921No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG6860.775386562980378No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA6680.7550411429604846No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA6660.752780540736052No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT6450.72904421737951No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGGTCATTCTTCTCTGGGG6330.7154806040329144No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT5300.5990595894746361No Hit
CATAGATGCTTCTGATATGTTGCCGTATGGTGGAGGGCTTTGCTGTTTCT5290.5979292883624198No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG5240.5922777828013382No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT5050.5708020616692286No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT5030.5685414594447961No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC4910.5549778460982006No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACACTGACGACATGTGTGAGA4890.552717243873768No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT4600.5199385116194954No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACATAGAACAGCTAAAAATC4390.49620218826295326No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG4020.45438104711095034No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGACCAAAGCTAGAAACTCCCATCT4010.45325074599873405No Hit
CATAGATGCTTCTGATATGTTGCCGTATAGATGCTCAGATCTCAAAAGGC3880.43855683153992225No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG3670.41482050818338007No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG3580.40464779817343344No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG3440.3888235826024053No Hit
CATAGATGCTTCTGATATGTTGCCGTGTTGCCTTTCCTCAGTTCTTTTTC3240.3662175603580794No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTGGGGAAAGAGAGCACTCTA3180.3594357536847816No Hit
CATAGAATACAACACACTCTCTGCCCTGTACACTGACGACATGTGTGAGA3170.3583054525725653No Hit
CATAGAGAACAGCCCTGAGAGAATGCTAGAGAACAGCTAAAAATCTTGGA3130.35378424812370013No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT3020.3413509358893209No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGAACAGCTAAAAATCTTGGAGCTC2990.33796003255267204No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT2970.33569943032823946No Hit
CATAGACCAGCAGTTCTACTCCTAGATATACAATAGACCAAAGCTAGAAA2600.29387828917623654No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG2580.29161768695180396No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA2570.29048738583958766No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGCCCATACTCCCTCATTATCCCTGT2530.2859661813907225No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCTGACGACATGGTTCTACACA2510.2837055791662899No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTATAGAACAGCTAAAAAT2430.2746631702685595No Hit
CATAGAATACAACACACTCTCTGCCCTGCTGAGATTGGCCTGTGTCTATG2400.27127226693191064No Hit
CATAGACCTGTGTGTGAGGCATTGTTGTTTCTATGGTGGAGGGCTTTGCT2350.2656207613708292No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTCAGTTGTGTGTGTGGTCT2340.2644904602586129No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTCTAACTTCATAGCACATCATG2250.2543177502486662No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTGGAGAGAAATGCTGCTCTAT2210.24979654579980107No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAATTTGCAAATACAGAATCAGTGA2170.2452753413509359No Hit
CATAGAAGGTAGGGTACTATTGATTAGAAAAGTATCTCCCTCATTATCCC2160.2441450402387196No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTCTATGTGTAGGTTGCCT2120.23962383578985444No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGGGTCTCATAGATCTCCCTCATTAT2110.23849353467763815No Hit
CATAGATGTGCCACATACCTTTCCCATCTATGAGACCAAAGCTAGAAACT2020.22832082466769146No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG1990.2249299213310426No Hit
CATAGACCTGTGTGTGAGGCATTGTTACACTGACGACATGGTTCTACACA1990.2249299213310426No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG1940.21927841576996113No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA1930.21814811465774483No Hit
CATAGATGTGGTCTCAGTGCCCTATGACAGTGAAACAAGATCGTGCCTCT1860.21023600687223076No Hit
CATAGAGAACAGCCCTGAGAGAATGCCATAGAGAACAGCTAAAAATCTTG1850.20910570576001447No Hit
CATAGAATACAACACACTCTCTGCCCTGGAGACAGCCGCTCACCTCTATG1800.203454200198933No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT1750.19780269463785155No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGACACAGTGAAACAAGATCGTGC1740.19667239352563526No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA1710.19328149018898635No Hit
CATAGACCTGTGTGTGAGGCATTGTTGCCTTTCCTCAGTTCTTTTTCTAT1650.18649968351568857No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAGCAAACTAACACAGAAAC1640.18536938240347228No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGACAGTGAAACAAGATCGTGCCT1620.1831087801790397No Hit
CATAGAAGGAGCTGGACTGGATGGAGAGGAGGGGGCAGAATATCTATGAG1570.1774572746179582No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGATGTTACCATGGCGTTTGTA1530.17293607016909304No Hit
CATAGACTCTGTTTTGCTACCTGGGGACTACAAGTACCCACCACCTCTAT1510.17067546794466046No Hit
CATAGAGGCATAGTATTGAAACTGTAGATCACTCGGCTGAGAAAGGAGGA1510.17067546794466046No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTGTATTTTTGGTAGAGACAGGG1460.16502396238357897No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCCTCCTCCTCCTCGAGGCAGAGGA1430.1616330590469301No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTCTATGAGACCAAGTCTCTGC1420.1605027579347138No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA1350.15259065014919976No Hit
CATAGATGCCTCAAAGAGCTGAAGACACTCGAGAACATTAGCTTAGTTAA1180.13337553124152274No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC1140.12885432679265757No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTGGAGACAGCCG1130.12772402568044125No Hit
CATAGACCAAAGCTAGAAACTCCCATCTATGAGACCAAGTCTCTGCTACC1100.12433312234379239No Hit
CATAGAATACAACACACTCTCTGCCCTGTGCCTCTTGTAGAAGGGATGGT1060.11981191789492722No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTATCCCTGTGCCTCTTGTAGAAGG1050.11868161678271093No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGTCCAGTGAACTCAAGGG1030.11642101455827832No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCTACACATAGAGAACAGCTAAAA1010.11416041233384573No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGCAGAGGACAGGTATCTATGAG1010.11416041233384573No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTCTGCTACCGTAGCAAACTAA980.11076950899719686No Hit
CATAGAATACAACACACTCTCTGCCCTGACACTGACGACACGGACTACAA930.10511800343611538No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)