FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807809

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807809
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences88472
Sequences flagged as poor quality0
Sequence length150
%GC38

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1346515.219504475992403No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG49225.5633420743286015No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT47645.384754498598427No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG39184.428519757663441No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA30663.465503210055159No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG23712.679943937064834No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT18922.138529704313229No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA15371.7372728094764447No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA15271.7259697983542814No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA14831.6762365494167646No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA14371.624242698254815No Hit
CATAGAAACAGCAAAGCCCTCCACCAGCACTTACTAACAAAGCGCTTCCT10791.2195949000813817No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT10711.2105524911836514No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA10471.1834252644904601No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT9741.1009132832986708No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA9381.0602224432588843No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT9061.0240528076679627No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTGTTTACTCGGAGATTTGACTGT8941.0104891943213672No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGCATTCTCTCAGGGC7950.8985893842119541No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA7250.8194683063568134No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC7120.8047743918980017No Hit
CATAGATCCCATACTCCTCCATTACCCTACCTACTTTTCTAATCAATAGT6810.7697350574192965No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG6720.7595623474093498No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA6700.7573017451849172No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT6600.7459987340627543No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT6540.7392169273894565No Hit
CATAGAGCCCCCAGAGAAGAATGACCAGAGGAGAATGATATTGTTGCAGA6270.7086987973596166No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT5360.6058413961479339No Hit
CATAGAAACAGCAAAGCCCTCCACCATACGGCAACATATCAGAAGCATCT5260.5945383850257708No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG5230.5911474816891219No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC5020.5674111583325798No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT4960.5606293516592821No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGGAATCTTTGGGA4800.5425445338638213No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT4430.5007233927118184No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTCTGTTTACTCGGAGATT4340.4905506827018718No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC3990.45099014377430147No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCACTGAGCTGAGGGTCACTTCT3950.4464689393254363No Hit
CATAGAGGAGAATGATATTGTTGCAGATTTCTATGTGTAGAACCATGTCG3850.4351659282032734No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATACGGCAACATATCAGAAGC3820.4317750248666245No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGGTAGCAAAACAGAGTCTATG3700.41821141152002894No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGAATCTTTGGGAGGCTATTA3570.40351749706121715No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGTGTAGAACCATGTCGTCAG3560.40238719594900085No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC3410.3854326792657564No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACACGGCAACATATCAGAAGCATC3280.37073876480694457No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCTAGCCAAATTCCTTACCGATCTA3160.357175151460349No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTACAGGGCAGAGAGT3110.35152364589926755No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTAGCATTCTCTCAGGGCTGT3080.34813274256261867No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT3040.3436115381137535No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCACTGAGCTGAGGGTCACTTC3030.3424812370015372No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC3010.3402206347771046No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATTGTATATCTAGGAGTAGAAC2590.29274798806402025No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG2540.2870964825029388No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT2520.2848358802785062No Hit
CATAGAGGCACAGGGATAATGAGGGAGTATGGGCGGAAGACACAGCACAC2490.2814449769418573No Hit
CATAGAAACAGCAAAGCCCTCCACCATAGAAACAACAATGCCTCACACAC2420.27353286915634323No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATAGAAGTGTATTAATTATCT2420.27353286915634323No Hit
CATAGACACAGGCCAATCTCAGCAGGGCAGAGAGTGTGTTGTATTCTATG2370.26788136359526177No Hit
CATAGACCACACACACAACTGAGAGGAGAATGATATTGTTGCAGATTTCT2310.261099556921964No Hit
CATAGAGCAGCATTTCTCTCCAAGGAAACATTGGAAAGATGGGGATCTAT2250.2543177502486662No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCATGTCGTCA2230.2520571480242336No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAAACATTGGAAAGATGGGGA2220.25092684691201733No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTTGCTCCTTCTCACACAAA2200.24866624468758478No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCTACACATAGACTCTGTTTACT2170.2452753413509359No Hit
CATAGAGGCACAGGGATAATGAGGGAGATACTTTTCTAATCAATAGTACC2160.2441450402387196No Hit
CATAGAGGCACAGGGATAATGAGGGAGATCTATGAGACCCGGAAGACACA2060.23284202911655663No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC2010.22719052355547517No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA1930.21814811465774483No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGATGGGAAAGGTATGTGG1930.21814811465774483No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA1920.21701781354552854No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGGCATTCTCTCAGGGCT1840.20797540464779818No Hit
CATAGAGGCACGATCTTGTTTCACTGTCATAGGGCACTGAGACCACATCT1790.20232389908671672No Hit
CATAGAGGTGAGCGGCTGTCTCCAGGGCAGAGAGTGTGTTGTATTCTATG1780.20119359797450043No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACAATGCCTCACACACAGGTCTAT1760.19893299575006784No Hit
CATAGAGGCACGATCTTGTTTCACTGTGTCTCATAGGGCACTGAGACCAC1710.19328149018898635No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG1690.19102088796455377No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA1650.18649968351568857No Hit
CATAGATATTCTGCCCCCTCCTCTCCATCCAGTCCAGCTCCTTCTATGTG1640.18536938240347228No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTCTGTTTACTCGGAGAT1610.1819784790668234No Hit
CATAGAGGCACGATCTTGTTTCACTGTCTCATAGGGCACTGAGACCACAT1550.17519667239352563No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT1540.17406637128130933No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCCAGGTAGCAAAACAGAGTCTAT1510.17067546794466046No Hit
CATAGAGTGATCCTCCTTTCTCAGCCGAGTGATCTACAGTTTCAATACTA1510.17067546794466046No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA1470.16615426349579526No Hit
CATAGATACCTGTCCTCTGCCTCGAGACACTCCCACTAGTGCCATGACAG1430.1616330590469301No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGGAGGAGGAGGAGGAGCTGACT1410.1593724568224975No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA1370.15485125237363234No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTCGAGTGTCTTCAGCTC1170.13224523012930645No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT1140.12885432679265757No Hit
CATAGAGGTGAGCGGCTGTCTCCACCAAAACTACAAAACTTATCTGGGCA1130.12772402568044125No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGGATAAGGAGGAGCTGACTT1030.11642101455827832No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAGCATTCTCTC1020.11529071344606202No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGGTAGCAGAGACCTT1000.11303011122162944No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGGCAGAGAGTGTGTTGTATT990.11189981010941315No Hit
CATAGATACCTGTCCTCTGCCTCTAGCCAAATTCCTTACCGATCTATGTG980.11076950899719686No Hit
CATAGAAGGAATCTTTGGGAGGCTATTAGTCTATGTGTAGAACCATGTCG970.10963920788498056No Hit
CATAGACCCCCTTGAGTTCACTGGACTGAGGGTCACTGACAGGTCTTAAA970.10963920788498056No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCGTCAGTGTCAGGGCAGAG910.1028574012116828No Hit
CATAGATGGGATTATAGGTGTGAGCCATTGCGCCTGGCCAAAAATTTCCA890.10059679898725021No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)