FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807820

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807820
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences91737
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3609239.342904171708255No Hit
CATAGAAGAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG50535.508137392764097No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTAAAGTGCTGTACTT22362.437402574751736No Hit
CATAGACTTCAGCCCTCACAAGCCTTACCTCAAATGCCAGGCTCTATGAG18722.0406161090944765No Hit
CATAGAGGGTGCTCCTGTGCTGGGTAGTGGTAGTCTATGAGACCAAGTCT16351.7822688773341182No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGCCATCACAGTTCATTG11611.2655744138134013No Hit
CATAGAGCTATCTGGCAAAAACCCATCTAAAAAAATACAAACATTAGCCA10811.1783685971854323No Hit
CATAGACACATGTAGGATGGGGTGGAGGATGATCAATGCTGCTTCTATGA10681.1641976519833872No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG10621.1576572157362897No Hit
CATAGAGGGTGCTCCTGTACTGGGTAGTGGTAGTCTATGAGACCAAGTCT10381.1314954707478988No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCACAGC10331.1260451072086508No Hit
CATAGACTTCAGCCCTCACAAGCCTTGGTATATTTTCTAAAGCCTGGGAT7590.8273651852578566No Hit
CATAGACACATGTAGGATGGGGTGGCTGGGCATTGCTCTTGACATCTCTA7320.7979332221459171No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTAGTCTATGAGACCAAGTCT6100.6649443517882643No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTCTGACTGTGTTAATTTAAAAGAA4800.5232348997678146No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAGACTGGAGGATGATCAATGCT4730.5156043908128672No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAATATACAAAAATTAG4610.5025235183186718No Hit
CATAGACACATGTAGGATGGGGTGGCCTCTCCTTCACTTTCTGCCATGAT4570.4981632274872734No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCACAGCACTTT4550.4959830820715742No Hit
CATAGACACATGTAGGATGGGGTGGGCATTGCTCTTGACATCTCTATGAG4480.4883525731166269No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACCAAAAACAATACAAAAAT4210.4589206100046873No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCCCAGCACTTT3930.42839857418489813No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAGTAATAGCACTTT3630.3956963929494097No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAAATACAAAAATTAG3580.3902460294101617No Hit
CATAGACACATGTAGGATGGGGTGGCTGTCATGATTATCACCTTCTATGA3570.38915595670231207No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTATTATCCTAGCACTTT3490.38043537503951513No Hit
CATAGATCATGGGACTTCAGCATGGGCATTGCTCTTGACATCTCTATGAG3390.369534647961019No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGTTTTTGTTTGCTTTGTTTGCTT3330.3629942117139213No Hit
CATAGAAGCATGGAAGACAAACAGCATGGCGGTGTTTGCAGATTTGGACC3130.34119275755692907No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTACCGTATGGAGGATGATCAA3100.33792253943338024No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTACCGTAGTTCCATGTGTGTG2920.31830123069208716No Hit
CATAGACACATGTAGGATGGGGTGGCTTCCCTTACACCTTCTGCCATGAT2860.3117607944449895No Hit
CATAGAGCCACCATGTACTTCTATATAGCTTGGCTGTCATGATTATCACC2840.3095806490292903No Hit
CATAGAGGTGTCCTTTCCCCACTTTACTCTCTCTCTCACCTGGCACCATG2800.3052203581978918No Hit
CATAGAGGGTGCTCCTGTACTGGGTGATGAGGGTATAAGGTCTATGTCAT2760.30086006736649334No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGCTGGAGGATGATCAATGCT2600.28341890404089953No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAACCCTAGCACTTT2570.2801486859173507No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTATATTTTCTAAAGCCTGGGATC2500.2725181769624034No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTATAATTCCAGC2420.26379759529960645No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG2410.26270752259175684No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG2350.2561670863446592No Hit
CATAGAAGAGTGAGACTTGAGATGGGAGGATAGGTCAAGGTGGGAGGATG2290.24962665009756152No Hit
CATAGAACCAAAAATGGCTAGGCATGGGCATTGCTCTTGACATCTCTATG2290.24962665009756152No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG2140.23327555947981732No Hit
CATAGAAGAGTGAGACTTGAGATGGGAGGATGAGGTCAAGGTGGGAGGAT2010.2191046142777723No Hit
CATAGAGCTATCTGGCAAAAACCCATCCTCTTGCCTCCGTCCCTCTATGA1960.21365425073852426No Hit
CATAGAAGAGTGAGACTTGAGATGGGATGGGCATTGCTCTTGACATCTCT1920.20929395990712582No Hit
CATAGAACCAAAAATGGCTAGGCATGTGGCTCACACCTGTAATCACAGCA1900.20711381449142657No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTACGTAGGTCAAGGTGGGAGG1780.1940329419972312No Hit
CATAGAGGTGTCCTTTCCCCACTTTACACTGACGACATGGTTCTACACAT1690.18422228762658469No Hit
CATAGAGCAGACAAACTTGCAAAAGACTACACTGCCATGATTGTAAGTTT1660.18095206950303586No Hit
CATAGAACCAAAAATGGCTAGGCATGGTGGCTCACACCTGTAATCACAGC1620.1765917786716374No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1590.17332156054808856No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG1580.17223148784023895No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGC1580.17223148784023895No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1520.16569105159314126No Hit
CATAGAACCAAAAATGGCTAGGCATGTTGGCTCACACCTGTAATCACAGC1490.16242083346959243No Hit
CATAGAAAATAATGTGGCCGGGCATTGCTCTTGACATCTCTATGAGACCA1440.15697046993034436No Hit
CATAGAAAATAATGTGGCTGGGCATTGCTCTTGACATCTCTATGAGACCA1430.15588039722249475No Hit
CATAGAAAATAATGTGGCCGGGCATGGTAGCTCATGCCTGTAATCCCAGT1370.14933996097539706No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCGTGTCATCCCAGCCCTTT1370.14933996097539706No Hit
CATAGACACATGTAGGATGGGGTGGCTCACGTGTGTAATCTCAGCACTTT1350.14715981555969784No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAATCCTAACACTTT1350.14715981555969784No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1280.13952930660475052No Hit
CATAGACTGGTCTCGAACTCCCAACCTCAGGGTGATCTGCCCACCTTTGC1250.1362590884812017No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAACTACAAAAAAATT1240.13516901577335208No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTGACTGTGTTAATTTAAAAGAACA1230.13407894306550247No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTATAATTCCAGC1220.13298887035765286No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTAACCACCTATCTACCCC1210.13189879764980322No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1200.13080872494195364No Hit
CATAGAAGAGTGAGACTTGAGATGGGAGGATTGGAGGATGATCAATGCTG1190.129718652234104No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG1160.12644843411055517No Hit
CATAGAAAGTCTGGACCAAGTGCCTTACCTCAAATGCCAGGCTCTATGAG1150.12535836140270554No Hit
CATAGACACATGTAGGATGGGGTGGCTTCACCTTTGACTTTTGCCATGAT1130.12317821598700635No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAATCCCAGCACTTT1130.12317821598700635No Hit
CATAGACACATGTAGGATGGGGTGGCACACTAACCACCTATCTACCCCCG1120.12208814327915672No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1090.11881792515560788No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG1070.11663777973990866No Hit
CATAGAAAAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG1060.11554770703205904No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCCCAGC1010.11009734349281097No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAAATACAAAATTAGC990.10791719807711174No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)