FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807825

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807825
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72512
Sequences flagged as poor quality0
Sequence length150
%GC49

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3480147.99343556928508No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT37305.143976169461607No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG26193.6118159752868495No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG14902.0548323036187113No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA9971.3749448367166814No Hit
CATAGAGGCGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA9231.2728927625772286No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG6390.8812334510150044No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT5110.7047109443954105No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG4570.6302405119152692No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT4520.6233451015004413No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG3850.5309466019417476No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGAGGTTTCCTGGGC3540.48819505736981467No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA3380.4661297440423654No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA3310.4564761694616064No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCGTGCTCTTGGC3310.4564761694616064No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG3240.4468225948808473No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG2610.3599404236540159No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAAGCGGCACGGTCCCGG2410.3323587819947043No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGTGCAATCTTGGC2300.317188879082083No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAAGCTTTGAGAT2210.3047771403353927No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA2200.30339805825242716No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCAGTGACCAAAAGCACAAGG2070.28546999117387467No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA2020.2785745807590468No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG2010.2771954986760812No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTCAGGAAAGTTGGAA1920.264783759929391No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1870.25788834951456313No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1840.2537511032656664No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1810.24961385701676964No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGTCAGAGGCAAGGGTAC1760.24271844660194172No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA1750.24133936451897617No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTACCAAAAGCACAAGGG1690.2330648720211827No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1660.22892762577228598No Hit
CATAGACACAACGTTTGAGACTGCCTGCTGCTCACTCTTTGGGTTCTATG1530.21099955869373346No Hit
CATAGATGTTGTTGTTCTGTTGCCCATAGAGAAGCTTTGAGATTTGTGTC1500.20686231244483674No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT1500.20686231244483674No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1490.20548323036187113No Hit
CATAGAACCAACCCTGATTCTGCTGGAGGCTGAAACTCTAAGGGTCTATG1470.20272506619594No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT1450.19996690203000883No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAGGCAAGGGTAC1440.19858781994704322No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG1410.19445057369814653No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1370.18893424536628423No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTGCCATACCAAGAATAAGAA1350.18617608120035303No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGCCATTGTCGCCTT1340.18479699911738745No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCAGTGTGGAGACCCCATATC1330.18341791703442187No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTAGGTAAACAAACTTCT1310.18065975286849073No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGGAGAATCTATGTGTA1290.17790158870255957No Hit
CATAGAGATCTTCTCGGCTTAGCGGCCATTGTCGCCTTCTCTTCTCTATG1250.17238526037069726No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA1220.16824801412180052No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGCTGCTGCTCACT1210.16686893203883493No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA1190.1641107678729038No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGCGCCTTCAGGTCA1170.16135260370697263No Hit
CATAGAGGTGAGCGGCTGTCCCCACAAGTCCGCGCAGAGCCTTCAGGTCA1120.15445719329214475No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC1070.14756178287731686No Hit
CGTAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1070.14756178287731686No Hit
CATAGAACAATCAGGCACCCACCATGTAGTCAGTGTCAGGGTAATTCTGG1060.14618270079435128No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGCTGCTGCTCACTCTTTGGG1010.1392872903795234No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGC1000.1379082082965578No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTACTGCTGCTCACTCT990.13652912621359223No Hit
CATAGAGGTGAGCGGCTGCCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA970.13377096204766106No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACTGCT930.12825463371579876No Hit
CATAGAACCAACCCTGATTCTGCTGGTCTCATAGAACCAACCCTGATTCT880.12135922330097086No Hit
CATAGATCTAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT820.11308473080317741No Hit
TATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA820.11308473080317741No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGACATTTATCGGGAGCCACAGAT810.11170564872021183No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT780.10756840247131509No Hit
CATAGATCCAGCTTCATCCATGTCCCCAGTGTACATTTATCGGGAGCCAC770.10618932038834951No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT770.10618932038834951No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCTTTCAGGTCA760.10481023830538393No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCTGC740.10205207413945278No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTAGAAGCTTTGAGATTTGTG740.10205207413945278No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTATGTGACCAAAAGCACAAGGGA730.10067299205648719No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)