FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807826

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807826
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences295356
Sequences flagged as poor quality0
Sequence length150
%GC38

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC250458.479597502674737No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA153055.1818822031717655No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA140724.764419886509839No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC138374.684854886983843No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA132394.482387356275139No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA104163.526591638564986No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT87502.9625265780955865No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCTTTCCCTCACTCTCTCCA73252.4800579639485907No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT64872.1963325613835507No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACTGATACAGGAAGGCCT64472.182789582740828No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATTCTGTTATTCAAAGGTTT62732.1238776256449845No Hit
CATAGATCATGGGACTTCAGCATGGCACAAGCAATGGGGAAAGGATTCTA60772.057517030295643No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGGAGACAGCCGCTCACCTC57501.9468031798913852No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG49551.677636479367272No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA48531.6431018838283291No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGTGTGCTGGCTTGACTTTTCAT47831.6194016712035644No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG43681.4788932677853168No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT40691.3776595024309648No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACACTGACTGATACAGGAAGGC40241.3624236514579016No Hit
CATAGATGAAAGCCTGTTGAATTTATGACTGATACAGGAAGGCCTTTCTA39801.3475263749509068No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG37111.2564498435785967No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATCCCCA31231.0573680575305733No Hit
CATAGACAGGGAGGCGTATAAGTGATGGAGACAGCCGCTCACCTCTATGA30711.0397621852950338No Hit
CATAGATGTCCATCATGTGGAAGCTGCCTTCCTAACCATGGGCATATCTA30491.0323135470415363No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGATCTATCCAGGAATTTTA29040.9832202494616665No Hit
CATAGACAGGGAGGCGTATAAGTGATGACACTGACTGATACAGGAAGGCC23060.7807527187529626No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGCACAGATCATTTAAGCTCAA21870.7404623572908626No Hit
CATAGAGCTGGCTTCCTAACTTCCAACACATAGAGCTGCCTTCCTAACCA21820.7387694849605222No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGATGGAGACAGCCGCTCAC21310.7215021871910507No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT21290.7208250382589146No Hit
CATAGATGCCCTTTTTGTGTGCTTCTTTCAAAAGTCTGGTCTATGAGACC20980.7103292298108046No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGTGTATCCCCAGAAATGTTA20380.6900147618467206No Hit
CATAGATGCCCTTTTTGTGTACTTCCATAGATGCCCTTTTTGTGTGCTTC19800.6703774428147726No Hit
CATAGAGATGTTTGATAAGCAGGGTGAGTGTTGATTGTGTTATTGGTAAG19590.6632673790273433No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGAATCCTTTCCCTCACTCT18150.6145126559135416No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC17820.6033396985332954No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT17470.5914895922209131No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCGTAG16980.5748994433835778No Hit
CATAGATCATGGGACTTCAGCATGGCTATGCAATCTGTGAGTTGCTGATG15360.5200503798805509No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG14870.5034602310432157No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGTGTACAAGCAATGGGGAAA12870.4357453378296023No Hit
CATAGATGAAAGCCTGTTGAATTTATGATCATAGAATCCTTTCCCTCACT12470.42220235918687954No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG12220.41373799753517787No Hit
CATAGATGTCCATCATGTGGAAGCTGTCACAGACAAGCAATGGGGAAAGG12120.4103522528744972No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTGTTATTCAAAGGTTTTCTGC11240.38055769986050736No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATCTGTTATTCAAAGGTTTT11160.3778491041319628No Hit
CATAGAGCTGGCTTCCTAACTTCCAACAATGGGCAAGCAATGACAGTCTA10470.3544874659732662No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAAATCCCCAGAAATGTTAGCAT9910.33552729587345437No Hit
CATAGATCATGGGACTTCAGCATGGCGACAGCATGGAGACAGCCGCTCAC9590.32469291295927627No Hit
CATAGAAAACAGAGTCCCAGTCCCCAGTATCCTTTCCCTCACTCTCTCCA9510.32198431723073173No Hit
CATAGAACTTCACAAGGGCTTTAGGGTACGGTAGCAGAATTACCTCTGGA9200.31148850878262163No Hit
CATAGATCATGGGACTTCAGCATGGGACTTCAGCAGAATTACCTCTGGAT9070.30708704072373677No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCACAGATCATTTAAGCTCAATCT9030.3057327428594645No Hit
CATAGAGCTGGCTTCCTAACTTCCAAGCTGCCTTCCTAACCATGGGCATA8700.2945597854792183No Hit
CATAGATCATGGGACTTCAGCATGGCTATGCAATCTATGAGACCAAGTCT8130.2752610409133385No Hit
CATAGATGTCCATCATGTGGAAGCTGGCTATTCTATGAGACCTGCTTCCT7750.26239521120275194No Hit
CATAGAGCTGGCTTCCTAACTTCCAATAACAATGGGCAAGCAATGACAGT7680.26002518994027546No Hit
CATAGATCCTCTCATTGTCCAGTTTGGCTACACATGGCTATGCAATCTAT7670.2596866154742074No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATACTGACGACATGGTTCTACA7660.25934804100813935No Hit
CATAGACAGGGAGGCGTATAAGTGATGGGATGGAGACAGCCGCTCACCTC7000.23700212624764688No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCACCT6610.2237977220709923No Hit
CATAGAGAGATTTTGGGCTGAGACGAAGTCTCTGCTACCGTATGGAGACA6280.21262476469074607No Hit
CATAGATCATGGGACTTCAGCATGGCAAGCAATGGGCAAGCAATGACAGT6000.2031446796408402No Hit
CATAGAAAACAGAGTCCCAGTCCCCAGTGTGTGCTGGCTTGACTTTTCAT5490.1858773818713688No Hit
CATAGACAGGGAGGCGTATAAGTGATGACACTGACGACATGGTTCTACAC5440.18418450954102844No Hit
CATAGATCATGGGACTTCAGCATGGCTACACTGACGACATGGTTCTACAC5410.18316878614282425No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTATACGTGAATGTGGATCAGAA5260.17809016915180323No Hit
CATAGAAAACAGAGTCCCAGTCCCCAGTACACTGACTGATACAGGAAGGC5110.17301155216078223No Hit
CATAGATGTCCATCATGTGGAAGCTGGCTATTCTATGAGACCAAGTCTCT4930.16691721177155705No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACACTGACGACATGGTTCCTCA4640.15709855225558308No Hit
CATAGACAGGGAGGCGTATAAGTGATGTGGAGACAGCCGCTCACCTCTAT4530.15337423312883436No Hit
CATAGATCATGGGACTTCAGCATGGCTTCCTAACCATGGGCATATCTATG4350.14727989273960915No Hit
CATAGAAAACAGAGTCCCAGTCCCCAGTAATGTTAGCATGTCTATCCCCA4000.1354297864272268No Hit
CATAGATCATGGGACTTCAGCATGGCTATGGGCTACACATGGCTATGCAA3850.13035116943620578No Hit
CATAGACAGGGAGGCGTATACGTGAATGTGGATCAGAACTTCTATGAGAC3810.1289968715719335No Hit
CATAGATGTCCATCATGTGGAAGCTGTCACAAGCAATGGGGAAAGGATTC3730.126288275843389No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGATTTGGAGACAGCCGCTC3620.12256395671664025No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATGGAGACAGCCGCTCACCTCT3590.12154823331843605No Hit
CATAGAAACCCCAAAGGCTATGTTCAGTGTATCCCCAGAAATGTTAGCAT3500.11850106312382344No Hit
CATAGAGCTGCCTTCCTAACCATGGGCATATCTATGAGACCAAGTCTCTG3460.1171467652595512No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTACCATGTTTTCATCCTG3250.11003670147212179No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGTGTGGAGACAGCCGCTCAC3170.10732810574357725No Hit
CATAGAGCTGGCTTCCTAACTTCCAAACAATGGGCAAGCAATGACAGTCT3140.10631238234537303No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTACCTGATTGG3140.10631238234537303No Hit
CATAGAGGATCCCATCTGAGTTGGTCCCATCTGTGCTGGCTTGACTTTTC3100.10495808448110076No Hit
CATAGAGATGTTTGATCAGCAGGGTGAGTGTTGATTGTGTTATTGGTAAG3040.10292663768469237No Hit
CATAGACCTTTGGGTTCATATCATCTGGCTACACATGGCTATGCAATCTA3010.10191091428648816No Hit
CATAGATTGGAACTTTGCCAGCCTTTCCCTCACTCTCTCCATCTATGAGA2980.10089519088828397No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)