FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807846

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807846
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22102
Sequences flagged as poor quality0
Sequence length150
%GC38

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAAGAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG428419.382861279522213No Hit
CATAGACACATGTAGGATGGGGTGGAGGATGATCAATGCTGCTTCTATGA12905.836575875486381No Hit
CATAGAGGGTGCTCCTGTGCTGGGTAGTGGTAGTCTATGAGACCAAGTCT12795.786806623834947No Hit
CATAGAAAATAATGTGGCCGGGCATTGCTCTTGACATCTCTATGAGACCA10334.673785177811963No Hit
CATAGACTGGTCTCGAACTCCCAACCTGATGGTATATTTTCTAAAGCCTG9074.103701022531898No Hit
CATAGACTTCAGCCCTCACAAGCCTTGGTATATTTTCTAAAGCCTGGGAT7093.207854492806081No Hit
CATAGAGGGTGCTCCTGTACTGGGTAGTGGTAGTCTATGAGACCAAGTCT6222.8142249570174647No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTAGTCTATGAGACCAAGTCT6192.8006515247488912No Hit
CATAGACACATGTAGGATGGGGTGGCTGGGCATTGCTCTTGACATCTCTA5802.6241969052574428No Hit
CATAGACTTCAGCCCTCACAAGCCTTACCTCAAATGCCAGGCTCTATGAG5112.312007963080264No Hit
CATAGAAAATAATGTGGCCGGGCATGGGCATTGCTCTTGACATCTCTATG4351.9681476789430818No Hit
CATAGAAAATAATGTGGCTGGGCATTGCTCTTGACATCTCTATGAGACCA4141.8731336530630711No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC3911.7690706723373453No Hit
CATAGATCATGGGACTTCAGCATGGGCATTGCTCTTGACATCTCTATGAG3591.6242873948059No Hit
CATAGACTGGTCTCGAACTCCCAACCACACTGACGACATGGTATATTTTC3421.5473712786173197No Hit
CATAGAACCAAAAATGGCTAGGCATGTGTAGAGGTCAAGGTGGGAGGATG2871.2985250203601484No Hit
CATAGAAAGTCTGGACCAAGTGCCTCCTTACCTCAAATGCCAGGCTCTAT2531.144692787982988No Hit
CATAGACACATGTAGGATGGGGTGGGCATTGCTCTTGACATCTCTATGAG2521.1401683105601303No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACACTGACGACATG2180.9863360781829698No Hit
CATAGAAGAGTGAGACTTGAGATGGGAGGATAGGTCAAGGTGGGAGGATG1640.7420142973486562No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTACACTGACGACATGGTTATG1630.7374898199257985No Hit
CATAGAAAGTCTGGACCAAGTGCCTTACCTCAAATGCCAGGCTCTATGAG1420.6424757940457877No Hit
CATAGACACATGTAGGATGGGGTGGAGACAGCCGCTCACCTCTATGAGAC1350.6108044520857842No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTATATTTTCTAAAGCCTGGG1330.6017554972400687No Hit
CATAGAAAAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG1270.5746086327029228No Hit
CATAGACACATGTAGGATGGGGTGGCTGTCATGATTATCACCTTCTATGA1260.5700841552800652No Hit
CATAGAGGGTGCTCCTGTACTGGGTGATGAGGGTATAAGGTCTATGTCAT1210.5474617681657769No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGTGCTGGGTAGTGGTAGTCT1190.5384128133200615No Hit
CATAGAGGGTGCTCCTGTACTGGGTGTGCTGGGTAGTGGTAGTCTATGAG1120.5067414713600579No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGAGGATGATCAATGCTGCTTCTAT1100.4976925165143426No Hit
CATAGAGGTGTCCTTTCCCCACTTTACACTGACGACATGGTTCTACACAT1070.4841190842457696No Hit
CATAGAGGGTGCTCCTGTACTGGCTGTGCTGGGTAGTGGTAGTCTATGAG1050.47507012940005433No Hit
CATAGACTGGTCTCGAACTCCCAACCACCTATCTACCCCCGGTCTATGAG1030.466021174554339No Hit
CATAGAAAATAATGTGGCCGGGCATGGAGACAGCCGCTCACCTCTATGAG980.4433987874400506No Hit
CATAGAACCAAAAATGGCTAGGCATGGGCATTGCTCTTGACATCTCTATG860.38910505836575876No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAATGCCATGATTGTAAGTTTCT660.2986155099086056No Hit
CATAGATGAAAGACAAGCAGGGAAGCCAGACAGGATGCGCAGATGGTCTA650.2940910324857479No Hit
CATAGAAAGTCTGGACCAAGTGCCTCCGTCCCTCTATGAGACCAAGTCTC590.26694416794860193No Hit
CATAGAGCAGACAAACTTGCAAAAGACTACACTGACGACATGGTATATTT510.23074834856574067No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAACACTGACGACATGGTTCCAT510.23074834856574067No Hit
CATAGAAAGTCTGGACCAAGTGCCTCAAATGCCAGCAAGGGAACAAAACT480.21717491629716767No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACATAGAGCATTACCCTCAA470.21265043887431No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGAGACAGCCGCTCACCTCTATGAG450.20360148402859468No Hit
CATAGATGAAAGACAAGCAGGGAAGGTCAAGGTGGGAGGATGGTCTATGA440.19907700660573702No Hit
CATAGACACATGTAGGATGGGGTGGCTCCTGTGCTGGGTAGTGGTAGTCT430.19455252918287938No Hit
CATAGAGAGTGCTCCTGTGCTGGGTAGTGGTAGTCTATGAGACCAAGTCT410.18550357433716405No Hit
CATAGACACATGTAGGATGGGGTGCCATCACAGTTCATTGTATTCTCTAT400.1809790969143064No Hit
CATAGATCATGGGACTTCAGCATGGCCATGGTTCTACACATAGATCATGG380.17193014206859106No Hit
CATAGAAGCATGGAAGACAAACAGCATGGGCATTGCTCTTGACATCTCTA380.17193014206859106No Hit
CATAGACTTCAGCCCTCACAAGCCTGCCATCACAGTTCATTGTATTCTCT360.16288118722287576No Hit
CATAGATGAAAGACAAGCAGGGAAGCCAGCAAGGGAACAAAACTCTATGA360.16288118722287576No Hit
CATAGAACATAATGTGGCCGGGCATTGCTCTTGACATCTCTATGAGACCA360.16288118722287576No Hit
CATAGAAAATAATGTGGCCGGGCATGTGTAGAGGTCAAGGTGGGAGGATG350.1583567098000181No Hit
CATAGAGGGTGCTCCTGTACTGGGTGACACTGACGACATGGTTCTACACA320.1447832775314451No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTTATGTAGACAGGGATTGATCTC320.1447832775314451No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTTCCATGTGTGTGCG310.14025880010858746No Hit
CATAGACACATGTAGGATGGGGTGGCTGTGCTGGGTAGTGGTAGTCTATG310.14025880010858746No Hit
CATAGACACATGTAGGATGGGGTGGAGGATGATCAATGTTGCTTCTATGA310.14025880010858746No Hit
CATAGAACCAAAAATGGCTAGGCATGTACACTGACGACATGGTTCTACAC290.13120984526287213No Hit
CATAGAAAATAATGTGGCCGGGCATTGCTCTTGACATCCCTATGAGACCA290.13120984526287213No Hit
CATAGACCCATGTAGGATGGGGTGGAGGATGATCAATGCTGCTTCTATGA280.12668536784001447No Hit
CATAGAAAGTCTGGACCAAGTGCCTCCTGTGCTGGGTAGTGGTAGTCTAT270.12216089041715683No Hit
CATAGAGGGTGCTCCTGTACTGGGTGTGCTGGGCATTGCTCTTGACATCT250.1131119355714415No Hit
CATAGACTTCAGCCCTCACAAGCCTTGGGATCAGACTTTATGTGCAATCT250.1131119355714415No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTTGGCTGTCATGATTATCACC250.1131119355714415No Hit
CATAGATCATGGGACTTCAGCATGGCTGTCATGATTATCACCTTCTATGA240.10858745814858384No Hit
CATAGACTGGTCTCGAACTCCCAACCTGATGGTATATTCTCTAAAGCCTG240.10858745814858384No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTATATTTTCTAAAGCCTGGGATC230.10406298072572619No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)