FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807847

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807847
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22102
Sequences flagged as poor quality0
Sequence length150
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG433619.618134105510812No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCTCTATGTGTAGAACCAT14236.4383313727264495No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCCATCCTACATGTGTCTATGT13586.144240340240702No Hit
CATAGAGATGTCAAGAGCAATGCCCGGCCACATTATTTTCTATGTGTAGA10774.8728621844177No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATCAGGTTGGGAGTTCGAGAC8543.8639037191204415No Hit
CATAGATCCCAGGCTTTAGAAAATATACCAAGGCTTGTGAGGGCTGAAGT6773.0630712152746358No Hit
CATAGACTACCACTACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT6342.8685186860917566No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACCCCATCCTACATGTGTCTA6132.7735046602117457No Hit
CATAGACTACCACCACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT6132.7735046602117457No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCTTGTGAGGGCTGAAGTCTATGTG4822.180798117817392No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCCGGCCACATTATTTTCTATG4592.076735137091666No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACATTATTTTCTATGTGTAGA4341.9636232015202246No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA3921.7735951497602025No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGAAGTCCCATGATCTATGTG3401.5383223237716044No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTGGTTGGGA3241.465930685005882No Hit
CATAGACCATCCTCCCACCTTGACCTCTACACATGCCTAGCCATTTTTGG2931.3256718848972944No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCCATCCTACATGTGTCTATGTG2611.180888607365849No Hit
CATAGAGCCTGGCATTTGAGGTAAGGAGGCACTTGGTCCAGACTTTCTAT2541.1492172654058457No Hit
CATAGACCATCCTCCCACCTTGACCTATCCTCCCATCTCAAGTCTCACTC1630.7374898199257985No Hit
CATAGAGATCAATCCCTGTCTACATAACCATGTCGTCAGTGTACTCCTAT1610.7284408650800832No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCACTTGGTCCAGACTTTCTATGTG1460.6605737037372184No Hit
CATAGAGGTGAGCGGCTGTCTCCACCCCATCCTACATGTGTCTATGTGTA1390.6289023617772147No Hit
CATAGAGATCAATCCCTGTCTACATAACCATGTCGTCAGTGTAGCATTTT1360.6153289295086417No Hit
CATAGAAGGTGATAATCATGACAGCCACCCCATCCTACATGTGTCTATGT1320.5972310198172112No Hit
CATAGATGACATAGACCTTATACCCTCATCACCCAGTACAGGAGCACCCT1310.5927065423943534No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCACCCAGTACAGGAGCACC1270.5746086327029228No Hit
CATAGACTACCACTACCCAGCACAGCATTTTAACACAGCATTGAAGTTCT1220.5519862455886345No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCAGTACAGGAGCACCCTCTAT1140.5157904262057732No Hit
CATAGACTACCACTACCCAGCACACCCAGTACAGGAGCACCCTCTATGTG1100.4976925165143426No Hit
CATAGACTACCACTACCCAGCACAGCCAGTACAGGAGCACCCTCTATGTG1070.4841190842457696No Hit
CATAGACCGGGGGTAGATAGGTGGTTGGGAGTTCGAGACCAGTCTATGTG1040.4705456519771966No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCCCGGCCACATTATTTTCTATGTG970.438874310017193No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCTAGCCATTTTTGGTTCTATG830.37553162609718577No Hit
CATAGACTCAAGAAACTTACAATCATGGCATTGCTCTTTGACTTATGATG670.3031399873314632No Hit
CATAGACCATCTGCGCATCCTGTCTGGCTTCCCTGCTTGTCTTTCATCTA650.2940910324857479No Hit
CATAGAGGGACGGAGGCAAGAGGATCAGAGACTTGGTCTCATAGAGGGAC540.24432178083431366No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTAGTCTTTT520.2352728259885983No Hit
CATAGAGTTTTGTTCCCTTGCTGGCATTTGAGGCACTTGGTCCAGACTTT500.226223871142883No Hit
CATAGAACATCGCACACACATGGAACCATGTCGTCAGTGTTGCTCTTTGA480.21717491629716767No Hit
CATAGAGGGACGGAGGCAAGAGGATAGTTTGAGGGTAATGCTCTATGTGT470.21265043887431No Hit
CATAGACCATCCTCCCACCTTGACCTTCCCTGCTTGTCTTTCATCTATGT460.20812596145145237No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGTTTGTCTTCCATGCTTCTA440.19907700660573702No Hit
CATAGACTACCACTACCCAGCACAGGAGCCACCCCATCCTACATGTGTCT440.19907700660573702No Hit
CATAGAGAATACAATGAACTGTGATGGCACCCCATCCTACATGTGTCTAT440.19907700660573702No Hit
CATAGAGGTGAGCGGCTGTCTCCACCCAGTACAGGAGCACCCTCTATGTG430.19455252918287938No Hit
CATAGAGGTGAGCGGCTGTCTCCATGATCTATGTGTAGAACCATGGCCAT350.1583567098000181No Hit
CATAGACCATCCTCCCACCTTGACCTCTACACATGCCCGGCCACATTATT350.1583567098000181No Hit
CATAGAGAATACAATGAACTGTGATGGCAGGCTTGTGAGGGCTGAAGTCT350.1583567098000181No Hit
CATAGAGTTTTGTTCCCTTGCTGGCTTCCCTGCTTGTCTTTCATCTATGT340.15383223237716043No Hit
CATAGAGATCAATCCCTGTCTACATAACCACCCAGTACAGGAGCACCCTC340.15383223237716043No Hit
CATAGATCCCAGGCTTTAGAAAATCTACCATCAGGTTGGGAGTTCGAGAC340.15383223237716043No Hit
CATAGACTACCACTACCCAGCACAGCCACCCCATCCTACATGTGTCTATG330.1493077549543028No Hit
CATAGAGGTGAGCGGCTGTCTCCATAACCATGTCGTCAGTGTACTCCTAT320.1447832775314451No Hit
CATAGAACATCGCACACACATGGAACTCCTATGTAATGTCTTATTTTGTT320.1447832775314451No Hit
CATAGATTGCACATAAAGTCTGATCACATCTCAAGTCTCACTCTTCTATG310.14025880010858746No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTACTCCTAT280.12668536784001447No Hit
CATAGATCCCAGGCTTTAGAAAATCTACCAAGGCTTGTGAGGGCTGAAGT280.12668536784001447No Hit
CATAGACTACCACTACCCAGCACAGGAGGCACTTGGTCCAGACTTTCTAT270.12216089041715683No Hit
CATAGATTGCACATAAAGTCTGATCCAATCTCAAGTCTCACTCTTCTATG260.11763641299429915No Hit
CATAGATTGCACATAAAGTCTGATCCCAAGGCTTGTGAGGGCTGAAGTCT250.1131119355714415No Hit
CATAGAAGGTGATAATCATGACAGCCAAGCATTTTAACACAGCATTGAAG240.10858745814858384No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCACACCCAGTACAGGAGCACCCT240.10858745814858384No Hit
CATAGATTGCACATAAAGTCTGATCCCAGTCTTTTGCAAGTTTGTCTGCT230.10406298072572619No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)