FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807850

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807850
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences42050
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2332655.47205707491082No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG10962.6064209274673007No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCAGATTTGGACCTGCGAGCGGGTTC8482.0166468489892986No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG7731.8382877526753865No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA6201.474435196195006No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA5851.3912009512485137No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA5381.2794292508917955No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG5261.2508917954815695No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC5211.239001189060642No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC3510.8347205707491081No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG2550.6064209274673008No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC1890.44946492271105826No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG1860.4423305588585018No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAAGTTTTTCCAAATATAA1640.3900118906064209No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGAGGGAAGGAAGGGCAAACTCT1370.3258026159334126No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTTCTTA1360.3234244946492271No Hit
CATAGATCTAGTACTGTAATTGTAGTGTGCATGTCAGCATGTTGAGATGA1310.31153388822829964No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTT1300.3091557669441141No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA1230.2925089179548157No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1200.2853745541022592No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1190.28299643281807374No Hit
CATAGAAGATGGTCTGCTACACTGGTACGGTAGCATGTTGAGATGAATAA1120.26634958382877527No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT1110.2639714625445898No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGCGCGGTGGCTCATGCCTGTAAT1100.2615933412604043No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1100.2615933412604043No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA1070.2544589774078478No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT1040.2473246135552913No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCTTCCCTAAGTACCAGGATTA1040.2473246135552913No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1030.24494649227110582No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1030.24494649227110582No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG930.2211652794292509No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT900.2140309155766944No Hit
CATAGATGTGGCTATGCAGACTGAGTGAGGGCAGTAAGTCTATGAGACCA900.2140309155766944No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG880.20927467300832342No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGACGCCGTGGCTCACACCTGTAAT860.20451843043995244No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG860.20451843043995244No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG850.20214030915576697No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA840.19976218787158143No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG810.19262782401902495No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCTGGTTCTACACATAATCAAT790.187871581450654No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG780.18549346016646848No Hit
CATAGAACTTTGTGCCCCCAGTGTCTGCTACCGTACCTTTCAGCATCTCT740.1759809750297265No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTTCTTATAGCCAGTGTCT700.16646848989298454No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCAGTTTTTCCAAATAT690.16409036860879905No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAAGGAGGGAAGGAAGGGCAAACTC690.16409036860879905No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCATGTCTTCTGTGTTTGGTCTATG670.15933412604042807No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTTCTTATAGCCAGTGTCTCC620.14744351961950058No Hit
CATAGACCCTTCTCCATGCCACACTCATGCAAAGCTGGTCTATGAGACCA610.1450653983353151No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAATGGCATTAAATGACTTGCCCAA610.1450653983353151No Hit
CATAGAAGGAGGGGAAACTGAGGCCACACTGACGACATGGTTCTACACAT590.1403091557669441No Hit
CATAGATCAACAATGGATGAGCAAAAGGGATTATCAGTAGTGCTCACATC560.13317479191438764No Hit
CATAGATCATGGGACTTCAGCATGGCAGTGTTTGCAGATTTGGACCTGCG550.13079667063020214No Hit
CATAGATGTGCCTCTCCAACATTCATACTTGTCTCATAGAGGAGCACCCT540.12841854934601662No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCTCTCCAGAACCCACCATCTATGA540.12841854934601662No Hit
CATAGATCATGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCGA540.12841854934601662No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGGCTAGTCCGTCACCCCTAATC490.11652794292508917No Hit
CATAGAAGGAGGGGAAACTGAGGCCACTGACGACATGGTTCTACACATAG490.11652794292508917No Hit
CATAGATCATGGGACTTCAGCATGGCATGTTGAGATGAATAATTGAGACT480.11414982164090369No Hit
CATAGACCCTTCTCCATGCCACATCAGGGATTATCAGTAGTGCTCACATC470.1117717003567182No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCAGTGAGCTGAGA460.10939357907253269No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGAATCCATCGCAGGCAGGCCCTGC460.10939357907253269No Hit
CATAGAGCTTCTGATCACTTTCGCCCTCTCTCCAGAACCCACCATCTATG460.10939357907253269No Hit
CATAGAACACAGATCTGCTTGGAGGGAAGGAAGGGCAAACTCTATGAGAC440.10463733650416171No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG430.10225921521997622No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)