FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807854

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807854
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences123936
Sequences flagged as poor quality0
Sequence length150
%GC40

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1881015.177188226181254No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA56974.596727343144849No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA38623.1161244513297186No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT31972.579557190808159No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG27712.235831396849987No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT27702.2350245287890527No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC27332.2051704105344694No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA27052.1825781048282984No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG19351.561289697908598No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA18611.501581461399432No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT17941.4475213013168087No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA16321.3168086754453912No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG13881.1199328685773302No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA13861.1183191324554609No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC13811.1142847921507875No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA13231.0674864446165764No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG11230.906112832429641No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGGTGGGGAAAGAGAGCACT9970.8044474567518719No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA9330.7528079008520526No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA8820.7116576297443842No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGAGAGGAGGGGGCAGAATATCT7770.6269364833462432No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT7270.5865930802995094No Hit
CATAGATGTGCCACATACCTTTCCCATCTATGAGACCAAAGCTAGAAACT5850.47201781564678547No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTGGAGAGAAATGCTGCTCTAT5700.45991479473276525No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGTCCAGTGAACTCAAGGGGG5660.4566873224890266No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA5420.4373224890265944No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA5400.43570875290472505No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGACACTTTGGACTCTGCCT5130.41392331525948883No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT5090.4106958430157501No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAGCAAACTAACACAGAAAC4770.38487606506584043No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC4740.3824554608830364No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA4660.376000516395559No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAAGGGTGGGGAAAGAGAGCAC4590.37035243996901623No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGCTGAGAAAGGAGGATCAC4430.35744255099406147No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGGTGGGGAAAGAGAGCACTCTA4210.33969145365349857No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTGGGGAAAGAGAGCACTCTA4160.3356571133488252No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTGGAGAGAAATGCTGCTCTAT4140.3340433772269559No Hit
CATAGACCCCATGTGCAGTGTAAGCTGAGAAAGGAGGATCACTCTATGAG4050.32678156467854375No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA4040.3259746966176091No Hit
CATAGACTCTGTTTTGCTACCTGGGGGCTCTATGAGACCAAGTCTCTGCT4020.3243609604957397No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG4000.3227472243738704No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG3970.3203266201910664No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG3960.3195197521301317No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT3880.31306480764265426No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACAGTGAAACAAGATCGTGC3790.3058029950942422No Hit
CATAGATGCTTCTGATATGTTGCCGTAAGAACAGCTAAAAATCTTGGAGC3780.30499612703330753No Hit
CATAGATCATGGGACTTCAGCATGGCTGAGAAAGGAGGATCACTCTATGA3760.30338239091143815No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA3680.2969274464239608No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGACAGAACAGCTAAAAATCTTGG3670.2961205783630261No Hit
CATAGAATACAACACACTCTCTGCCCTGGTGGAGGGCTTTGCTGTTTCTA3600.29047250193648333No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT3510.28321068938807126No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAACTTAGCAACCTGTACATTT3250.2622321198037697No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACACTGACGACATGTGT3230.2606183836819003No Hit
CATAGAATACAACACACTCTCTGCCCTGCCTCTTGTAGAAGGGATGGTCT3180.25658404337722696No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTGCTGAGATTGGCCTGTGTCT3160.2549703072553576No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG3110.25093596695068426No Hit
CATAGATGCTTCTGATATGTTGCCGTAGTCCAGTGAACTCAAGGGGGTCT3100.25012909888974955No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG3030.2444810224632068No Hit
CATAGAAGGAGCTGGACTGGATGGACCTAGAGGCTATTACACTTAGCAAA2870.231571133488252No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA2840.22915052930544796No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCCTGTTCACTCTGATGGTACTT2780.2243093209398399No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACTGACGACATGGTTCTACACA2770.22350245287890524No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGAGAGGAGGGGGCAGAATA2700.21785437645236252No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGCAAACTAACACAGAAACAG2690.2170475083914278No Hit
CATAGAGAACAGCCCTGAGAGAATGCGAGAACAGCTAAAAATCTTGGAGC2630.2122063000258198No Hit
CATAGAAGTGACCCTCAGCTCAGTGACAGTGAAACAAGATCGTGCCTCTA2630.2122063000258198No Hit
CATAGAACATCTACAGAACTCTCTACCCATCTATGAGACCAAAGCTAGAA2620.2113994319648851No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT2620.2113994319648851No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT2620.2113994319648851No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGCTGAGAAAGGAGGATCACTCT2530.204137619416473No Hit
CATAGACTCTGTTTTGCTACCTGGGGAGAGGAGGGGGCAGAATATCTATG2500.20171701523366897No Hit
CATAGATGCTTCTGATATGTTGCCGTCAGTACTCTCAGTTGTGTGTGTGG2490.2009101471727343No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGTGCAAATTGTCAGTGTGTC2460.19848954298993027No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTAATGGAGGAGTATGGGATC2450.1976826749289956No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGAAACAAGATCGTGCCTCTAT2400.19364833462432224No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGGGTAATGGAGGAGTATGG2380.19203459850245286No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG2340.18880712625871418No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG2320.18719339013684483No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTATCCTAAGCAAA2310.18638652207591014No Hit
CATAGACTCTGTTTTGCTACCTGGGGCATAGAACAGCTAAAAATCTTGGA2290.18477278595404079No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCCCTCATTATCCCTGTGCCTC2230.17993157758843273No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT2220.17912470952749807No Hit
CATAGATGCTTCTGATATGTTGCCGTAAGAACATTAGCTTAGTTAATTAG2170.17509036922282467No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT2140.17266976504002066No Hit
CATAGATGATCCATCTACCTCTGCTTCAGTGTACTCTCAGTTGTGTGTGT2100.16944229279628195No Hit
CATAGACCCCATGTGCAGTGTAAGCTTAGGGTAATGGAGGAGTATGGGAT2100.16944229279628195No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGAATTTGCAAATACAG2040.1646010844306739No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCTAACTTCATAGCACATCATG2030.1637942163697392No Hit
CATAGATGCTTCTGATATGTTGCCGTCATAGATGCTCAGATCTCAAAAGG2020.16298734830880454No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGGTGCAAATTGTCAGTGTGTCTA1990.16056674412600053No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCACATCTACAAGGACACTCATC1980.15975987606506584No Hit
CATAGAATACAACACACTCTCTGCCCTGACACGGACTACAAGTACCCACC1920.1549186676994578No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCAGATCTCAAAAGGCTTCTATGA1900.15330493157758843No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGGTGGGGAAAGAGAGCACTC1900.15330493157758843No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACACATAGAACAGCTAAAAA1880.15169119545571907No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACACGCACAACTGGCATCTGGTGA1840.1484637232119804No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC1830.1476568551510457No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAACAGAACATTAGCTTAG1830.1476568551510457No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTATGGTGGAGGGCTTTGCTGTT1790.144429382907307No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTATGAGGACACTTTGGACTCT1760.142008778724503No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGTCATTCTTCTCTGGGGGCTCT1710.1379744384198296No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTACCGATACAGTGAAACAAGA1690.13636070229796024No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCACACTGAGAATTTGCAAATA1690.13636070229796024No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGTAGAACATTAGCTTAGTTAA1680.13555383423702555No Hit
CATAGATGCTTCTGATATGTTGCCGTATGGTGGAGGGCTTTGCTGTTTCT1680.13555383423702555No Hit
CATAGATGTGGTCTCAGTGCCCTATGACATAGACCAAAGCTAGAAACTCC1630.13151949393235218No Hit
CATAGACCTGTGTGTGAGGCATTGTTACATAGGACACTTTGGACTCTGCC1500.12103020914020139No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG1500.12103020914020139No Hit
CATAGATGTGCCACATACCTTTCCCAGTGTAGGGTAATGGAGGAGTATGG1490.12022334107926673No Hit
CATAGAACATCTACAGAACTCTCTACCCATGGTGGAGGGCTTTGCTGTTT1490.12022334107926673No Hit
CATAGAACATCTACAGAACTCTCTACCCATAGAACAGCTAAAAATCTTGG1490.12022334107926673No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGGGGGCATTGGGGATGGC1480.11941647301833204No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCGTTATCCTCAGCAAA1470.11860960495739736No Hit
CATAGATGCTTCTGATATGTTGCCGTAGAACATTAGCTTAGTTAATTAGG1470.11860960495739736No Hit
CATAGACTCTGTTTTGCTACCTGGGGCACAACTGGCATCTGGTGATCTAT1440.11618900077459333No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC1420.11457526465272398No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA1420.11457526465272398No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTGTTGCCTTTCCTCAGTTCTTTTT1410.11376839659178932No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACATAGAACATTAGCTT1410.11376839659178932No Hit
CATAGAGAACAGCCCTGAGAGAATGCCTCTTGTAGAAGGGATGGTCTATG1400.11296152853085464No Hit
CATAGATGTGGTCTCAGTGCCCTATGCTCAGATCTCAAAAGGCTTCTATG1390.11215466046991995No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTAGAACAGCTAAAAATCTTGGA1380.11134779240898529No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAACAGGGTGGGGAAAGAG1380.11134779240898529No Hit
CATAGATGTGCCACATACCTTTCCCAGGGTGGGGAAAGAGAGCACTCTAT1370.1105409243480506No Hit
CATAGATGTGCCACATACCTTTCCCAGTGTAGGGTGGGGAAAGAGAGCAC1320.10650658404337723No Hit
CATAGACCCTCCTATCCCTTTTCCCCACACGGACTACAAGTACCCACCAC1320.10650658404337723No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTATCTCCCTCATTATCCCTGTG1300.10489284792150788No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGAGAGGAGGGGGCAGAATATCT1290.1040859798605732No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAGGGTGGGGAAAGAGAGCACTCTA1290.1040859798605732No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA1290.1040859798605732No Hit
CATAGATGCCTCAAAGAGCTGAAGACATCTCCCTCATTATCCCTGTGCCT1290.1040859798605732No Hit
CATAGACCCTCCTATCCCTTTTCCCCTCCCTCATTATCCCTGTGCCTCTA1280.10327911179963851No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGTGAAACAAGATCGTGCCTCT1280.10327911179963851No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTGTATTTTTGGTAGAGACAGGG1280.10327911179963851No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCCTCATTATCCCTGTGCCT1270.10247224373870385No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGAGGTGGCTGAGAAAGGAG1270.10247224373870385No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGCAAACTAACACAGAAACA1260.10166537567776916No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGCCCAGGTGCAAATTGTCAGTG1260.10166537567776916No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACGGACTACAAGTACCCACCAC1250.10085850761683449No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAGGAGAGGAGGGGGCAGAATATC1240.10005163955589982No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)