FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807857

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807857
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences111398
Sequences flagged as poor quality0
Sequence length150
%GC41

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2693224.176376595630085No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT53454.798111276683603No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT33933.0458356523456436No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA27942.508124023770624No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG27402.4596491858022587No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA23072.0709527998707338No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT18951.7011077398157957No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG14731.3222858579148637No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA14441.2962530745614824No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA14411.2935600280076842No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT13671.2271315463473311No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG13291.1930196233325554No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA11801.05926497782725No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTAGGATAATGGCTTCCA10950.9829619921363041No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT10250.9201242392143486No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA10110.9075566886299574No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA9600.8617748972153899No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT9220.827662974200614No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT8770.7872672758936426No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC7750.6957036930645075No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT7540.6768523671879207No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT7430.6669778631573278No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA7120.6391497154347475No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT7110.6382520332501481No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT7110.6382520332501481No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG6260.561949047559202No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC6120.5493814969748111No Hit
CATAGATCACCAGATGCCAGTTGTGCTACGGCAACATATCAGAAGCATCT5510.4946228837142498No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA5360.48115765094525936No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCTAGCCAAATTCCTTACCGATCTA5280.4739761934684644No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC5240.470385464730067No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGGTAGCAAAACAGAGTCTATG5220.46859010036086823No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGATAGCGAGAAGAGTGGAGGCT4990.4479434101150828No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTATGTGTAGAACCATGT4880.4380689060844899No Hit
CATAGATTCAACCAGCCATCCCCAATTACGGCAACATATCAGAAGCATCT4870.4371712238998905No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGAATGATATTGTTGCAGATTT4770.4281944020538968No Hit
CATAGAGCAGCATTTCTCTCCAAGGAATCTTTGGGAGGCTATTAGTCTAT4720.4237059911309No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT4640.4165245336541051No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA4430.3976732077775184No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGATAGCGAGAAGAGTGGAGGC4240.38061724627013055No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG4160.3734357887933356No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGATAACGGCTTCCA4060.364458966947342No Hit
CATAGAAGCCTTTTGAGATCTGAGCATTCTCTCAGGGCTGTTCTCTATGT4060.364458966947342No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC3900.35009605199375216No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG3780.3393238657785598No Hit
CATAGACCACACACACAACTGAGAGTTGGGAGCACACTTGAACATAGACT3750.3366308192247617No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC3570.3204725399019731No Hit
CATAGATCCCATACTCCTCCATTACCCTGAAGCAGAGGTAGATGGATCAT3430.30790498931758203No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAAACAATGCCTCACACACAGGTCT3420.30700730713298263No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT3410.3061096249483833No Hit
CATAGAGTGATCCTCCTTTCTCAGCCACACTGAAGCAGAGGTAGATGGAT3250.29174670999479346No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG3070.2755884306720049No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA3060.27469074848740554No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGCATTCTCTCAGGGCTGTT3050.27379306630280614No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTTCTGTTTACTCGGAG2930.26302088008761376No Hit
CATAGAGGCACGATCTTGTTTCACTGTCGTCAGTGTAGAAGTGTATTAAT2930.26302088008761376No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTCTGTTTACTCGGAGAT2800.25135101168782203No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC2740.24596491858022584No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC2670.2396811432880303No Hit
CATAGAGTCCTTCCCTCTCACACATGTACTCTGTTTACTCGGAGATTTGA2620.2351927323650335No Hit
CATAGAGGCACGATCTTGTTTCACTGTGTACGGCAACATATCAGAAGCAT2580.23160200362663605No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATACGGCAACATATCAGAAGC2570.23070432144203668No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGTGTAGAACCATAGGAATCT2530.2271135927036392No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGGAAGACACAGCACACTCTTC2480.2226251817806424No Hit
CATAGATCCCATACTCCTCCATTACCCTACGGCAACATATCAGAAGCATC2400.21544372430384748No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTAGACCTTTTTCTGTAGTCA2360.21185299556545No Hit
CATAGAAGTACCATCAGAGTGAACAGGCCATGCTGAAGTCCCATGATCTA2360.21185299556545No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT2330.20915994901165189No Hit
CATAGAGGCACGATCTTGTTTCACTGTCTTCAGCTCTTTGAGGCATCTAT2310.2073645846424532No Hit
CATAGATGAGTGTCCTTGTAGATGTGCATAGGGCACTGAGACCACATCTA2260.20287617371945638No Hit
CATAGAGGCACAGGGATAATGAGGGAGTACGGAAGACACAGCACACTCTT2240.20108080935025766No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCA2080.1867178943966678No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT2040.18312716565827036No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAATCTTTGGGAGGCTATTAGTC2010.18043411910447224No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTAAGGAATCTTTGGGAGGCTATT1980.17774107255067417No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG1900.17055961507387926No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAGCATTCTCTC1890.1696619328892799No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTAGAGGAGAATGATATTGTTGCAG1880.1687642507046805No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGAAGTGTATTAATTATCTAT1880.1687642507046805No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGTTAATGGCTTCCA1800.1615827932278856No Hit
CATAGAAACAGCAAAGCCCTCCACCAGATCTCAACACATCCGAAGGACAG1800.1615827932278856No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTTCAGCTCTTTGAGGCATCTAT1800.1615827932278856No Hit
CATAGAAACAGCAAAGCCCTCCACCATCTTGCTCCTTCTCACACAAATCT1780.15978742885868688No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTATGTGTAGAACCATGTCTCAG1770.1588897466740875No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA1720.1544013357510907No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTTGGGAAAGGTATGTGGCAC1650.14811756045889513No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAGCACTATTCTCTGGCCCGTCTAT1630.1463221960896964No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTCCCGAGTATCTGGGACTACAGGT1610.14452683172049766No Hit
CATAGAACCAACCTCTCTATCTCCGTAGGAATCTTTGGGAGGCTATTAGT1610.14452683172049766No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA1590.14273146735129894No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGATGGGAAAGGTATGTGG1590.14273146735129894No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGCATTCTCTCAGGGC1580.1418337851666996No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGATAATGGCGTCCA1540.13824305642830212No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA1500.13465232768990468No Hit
CATAGAGTGATCCTCCTTTCTCAGCTTACACTGCACATGGGGTCTATGTG1500.13465232768990468No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCAGCTACTTGGGAGGCTGCGGCG1470.13195928113610655No Hit
CATAGAGGAGAATGATATTGTTGCAGATTTCTATGTGTAGAACCATGTCG1430.1283685523977091No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCATGTCGTCA1400.12567550584391102No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1390.12477782365931166No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCAGCTACTAGGAAGGCTAAGGTG1380.1238801414747123No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1340.12028941273631484No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTCTATGTGTAGAACCATGCCTT1280.11490331962871864No Hit
CATAGAGTGCTCTCTTTCCCCACCCTGAAGCAGAGGTAGATGGATCATCT1270.11400563744411929No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG1260.11310795525951992No Hit
CATAGAAGTACCATCAGAGTGAACAGGCTAGAAGTGTATTAATTATCTAT1250.11221027307492056No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGATGGGAGTTTCTAGCAC1210.10861954433652309No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1190.10682417996732435No Hit
CATAGACACAGGCCAATCTCAGCAGGGCAGAGAGTGTGTTGTATTCTATG1190.10682417996732435No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCGCATTCTCTCAGGGCTGTTC1160.10413113341352627No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTCCAGTGGCTACGACTGCAGGCAT1160.10413113341352627No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACAACAGTCCCCAGAGTGTGATGT1150.10323345122892691No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGAATCTTTGGGAGGCTATTA1140.10233576904432753No Hit
CATAGACCATCCCTTCTACAAGAGGCAGAGGGAAATGTGAATGGAATGTC1140.10233576904432753No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1130.10143808685972819No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1120.10054040467512883No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)