FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807860

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807860
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61769
Sequences flagged as poor quality0
Sequence length150
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC716611.601288672311354No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA39816.444980491832472No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA37796.117955608800531No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA33245.381340154446406No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC32535.266395764865871No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA30264.898897505221066No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG29834.829283297446939No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT19503.1569233758033963No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG17512.834755297964999No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACTGATACAGGAAGGCCT17452.825041687577911No Hit
CATAGATCATGGGACTTCAGCATGGCTATGGTGTTGATTGTGTTATTGGT10191.6496948307403387No Hit
CATAGATTGGAACTTTGCCAGCCTTATCCCCAGAAATGTTAGCATGTCTA9351.5137042853211158No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCGTAT8551.3841894801599508No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCCCAGAAATGTTAGCATGT8381.3566675840632032No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATATCCCCAGAAA6901.117065194515048No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGTTGATTGTGTTATTGGTAAGG6831.105732649063446No Hit
CATAGACAGGGAGGCGTATAAGTGATGACACTGACGACATGGTTCTACAC5970.9665042335151938No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATTCTGTTATTCAAAGGTTT5880.9519338179345626No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG5700.9227929867733005No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCCGTATGTGCTTCTTTCAAAA5560.9001278958700967No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGTGTGCTTCTTTCAAAAGTCTG5470.8855574802894657No Hit
CATAGAGCTGGCTTCCTAACTTCCAAAATCCTTTCCCTCACTCTCTCCAT5010.8110864673217958No Hit
CATAGATGTCCATCATGTGGAAGCTGTACCATGTTTTCATCCTGCTTCTA4320.6993799478702909No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGTCTGTTATTCAAAGGTT4150.6718580517735434No Hit
CATAGATGCCCTTTTTGTGTACTTCCACATAGATGCCCTTTTTGTGTGCT3860.6249089349026211No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC3850.6232899998381064No Hit
CATAGAACTTCACAAGGGCTTTAGGGTACGGTAGCAGAATTACCTCTGGA3730.6038627790639317No Hit
CATAGATCATGGGACTTCAGCATGGCTACACTGACGACATAGATCATGGA3670.5941491686768443No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT3630.5876734284187861No Hit
CATAGAGCTGGCTTCCTAACTTCCAATACGGTTGCACAGATCATTTAAGC3450.558532597257524No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACGACATGGTTCTACACATA3420.5536757920639803No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT3290.532629636225291No Hit
CATAGATCATGGGACTTCAGCATGGCCATGGTTCTACACAAAGTCACGAA3280.5310107011607765No Hit
CATAGATCATGGGACTTCAGCATGGCTATGCAATCTGTGAGTTGCTGATG3060.4953941297414561No Hit
CATAGACAGGGAGGCGTATAAGTGATGTGCTTCTTTCAAAAGTCTGGTCT2960.4792047790963105No Hit
CATAGACCTTTGGGTTCATATCATCTGGCTACACATGGCTATGCAATCTA2530.4095905713221843No Hit
CATAGATGTCCATCATGTGGAAGCTGTCACAGACAAGCAATGGGGAAAGG2380.3853065453544658No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGATGGAGACAGCCGCTCAC2350.38044974016092215No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGTGTATAGATCATGGAGACA2240.36264145445126195No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGATCCCCAGAA2110.34159529861257265No Hit
CATAGATGTCCATCATGTGGAAGCTGCCTTCCTAACCATGGGCATATCTA2080.33673849341902895No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCAATGGGCAA1970.3189302077093688No Hit
CATAGACAGAAACCACCCAGACAACCGCTCACCTGGAGACAGCCGCTCAC1860.3011219219997086No Hit
CATAGATGTATACAAGCTGTCACAGACAACATGACGACATGGTTCTACAC1820.29464618174165036No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA1550.25093493499975716No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACACTGACGACATGGTTCTACA1500.24284025967718434No Hit
CATAGATGTATACAAGCTGTCACAGACAACAGACATGGTTCTACACATAG1470.23798345448364064No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGAGACCAAGTCTCTCTGT1420.22988877916106784No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCACAGATCATTTAAGCTCAATCT1410.2282698440965533No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT1330.2153183635804368No Hit
CATAGAGCTGGCTTCCTAACTTCCAACAATGGGCAAGCAATGACAGTCTA1240.20074794799980572No Hit
CATACTCAGGAGGCTGAGGCAGTCTATGAGACCAAGTCTCTGCTACCGTA1240.20074794799980572No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG1200.19427220774174747No Hit
CATAGAAAACAGAGTCCCAGTCCCCAGTATCCCCAGAAATGTTAGCATGT1140.1845585973546601No Hit
CATAGATGTCCATCATGTGGAAGCTGCACAGATCATTTAAGCTCAATCTA1050.16998818177402905No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACACTGACGACATGCTTCCTTC1050.16998818177402905No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTAAATGATCTATCCAGGAATT1000.16189350645145623No Hit
CATAGAACCTCTTTTGGGGCAAAGTTCCAATCTATGTGTGCTTCTTTCAA960.15541776619339798No Hit
CATAGATCATGGGACTTCAGCATGGCAAGCAATGGGGAAAGGATTCTATG920.14894202593533973No Hit
CATAGAAAACAGAGTCCCAGTCCCCAGTGTTGATTGTGTTATTGGTAAGG910.14732309087082518No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTACACATGGCTACA900.1457041558063106No Hit
CATAGAAAACAGAGTCCCAGTCCCCAGTAATGTTAGCATATCCCCAGAAA890.14408522074179606No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGAATCCTTTCCCTCACTCT830.13437161035470868No Hit
CATAGATCCTCTCATTGTCCAGTTTGGCTACACATGGCTATGCAATCTAT810.13113374022567956No Hit
CATAGATTGGAACTTTGCCAGCCTTCCTAACCATGGGCATATCTATGAGA810.13113374022567956No Hit
CATAGAACCTCTTTTGGGGCAAAGTTCCAATCTATGTGTAGAACCATGGT810.13113374022567956No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATAGATCATGGGACTTCAG790.12789587009665043No Hit
CATAGATCATGGGACTTCAGCATGGCTATGCAATCTATGGAGACAGCCGC790.12789587009665043No Hit
CATAGATCATGGGACTTCAGCATGGCTTCCTAACCATGGGCATATCTATG740.11980119477407762No Hit
CATAGATGTATACAAGCTGTCACAGACAACACACTGACGAATGCTTCCTT700.11332545451601937No Hit
CATAGACAGGGAGGCGTATAAGTGATGGAGACAGCCGCTCACCTCTATGA660.10684971425796111No Hit
CATAGAAACCCCAAAGGCTATGTTCATATCATCTGTTATTCAAAGGTTTT650.10523077919344655No Hit
CATAGATCATGGGACTTCAGCATGGCCACTGACGACATGGTTCTACACAT630.10199290906441742No Hit
CATAGATGCCCTTTTTGTGTGCTTCTTTCAAAAGTCTGGTCTATGAGACC620.10037397399990286No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGTGTACAAGCAATGGGGAAA620.10037397399990286No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACAAAGTCACGAAAGTGGG620.10037397399990286No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)