FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807861

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807861
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61769
Sequences flagged as poor quality0
Sequence length150
%GC38

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCATTCAACTTTCCTTGGCTCTATGTGTA699911.330926516537422No Hit
CATAGAGGTGAGCGGCTGTCTCCAGATGATATGAACCCAAAGGTCTATGT38756.273373374993929No Hit
CATAGATTGCATAGCCATGTATAGCCCCTAAGCCCAGGTCTATGTGTAGA37366.048341401026405No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAGCCCAGGTCTATGTGTAGA33075.353818258349658No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA31665.125548414253105No Hit
CATAGATTGCATAGCCATGTGTAGCCATGCTGAAGTCCCATGATCTATGT30354.913467920801697No Hit
CATAGAGGTGAGCGGCTGTCTCCAAACTGGACAATGAGAGGATCTATGTG27854.508734154673056No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAAGCCCTTGTGAAGTTCTAT19303.1245446745131056No Hit
CATAGACCTCCTGTTTGACCATTTTGAACATAGCCTTTGGGGTTTCTATG17202.784568310965047No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTGGAAGTACACAAAAAGGGC16142.6129611941265036No Hit
CATAGACCCTTACCAATAACACAATCAACACCATAGCCATGCTGAAGTCC10071.6302676099661642No Hit
CATAGACATGCTAACATTTCTGGGGATACTGGGGACTGTGACTCTGTTTT9061.4667551684501936No Hit
CATAGACATGCTAACATTTCTGGGGATAAGGCTGGCAAAGTTCCAATCTA8771.419806051579271No Hit
CATAAATTCAACAGGCTTTCATCTATGTGTAGAACCATGTCGTCAGTGTA7611.2320095840955818No Hit
CATAGACCCTTACCAATAACACAATCAACACTGGGGACTGTGACTCTGTT7601.2303906490310674No Hit
CATAGACTGCCTCAGCCTCCTGAGTATGTGTAGAACCATGTCGTCAGTGT7311.183441532160145No Hit
CATAGACATGCTAACATTTCTGGGGATATGCTAACATTACTGGGGACTGT7201.1656332464504848No Hit
CATAGAGCAGAAAACCTTTGAATAACAGAATAGAGCAGGAATTAGACTCT5770.9341255322249024No Hit
CATAGACCAGACTTTTGAAAGAAGCACATACGGGAGCAGGAATTAGACTC5620.9098415062571841No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGTGTAG5530.895271090676553No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGGAATTAGACTCTTGACATCTATG5490.8887953504184948No Hit
CATAGACCAGACTTTTGAAAGAAGCACACATGGAAGTACACAAAAAGGGC5440.880700675095922No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATTTTGGAAGTTAGGAAGCCAGCT4810.7787077660315045No Hit
CATAGAAGCAGGATGAAAACATGGTACAGCTTCCACATGATGGACATCTA4240.6864284673541744No Hit
CATAGAGCAGAAAACCTTTGAATAACAGACATAGAGCAGGAATTAGACTC4140.6702391167090288No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGTGGAA3780.6119574543865046No Hit
CATAGAATCCTTTCCCCATTGCTTGTATACATCTATGTGTAGAACCATGT3640.5892923634833007No Hit
CATAGACCATCCAGAGGTAATTCTGCTACCGTACCCTAAAGCCCTTGTGA3640.5892923634833007No Hit
CATAGAGGTGAGCGGCTGTCTCCATGATCTATGTCGTCAGTGTAGCCATG3630.5876734284187861No Hit
CATAGACCATCCAGAGGTAATTCTGCTCATTATTATTGGATGGGATCTAT3510.5682462076446113No Hit
CATAGATTGAGCTTAAATGATCTGTGCAACCGTATTGGAAGTTAGGAAGC3430.5552947271284948No Hit
CATAGAATCCTTTCCCCATTGCTTGCTCATTATTATTGGATGGGATCTAT3140.5083456102575725No Hit
CATAGACCCACTTTCGTGACTTTGTGTAGAACCATGGCCATGCTGAAGTC3080.4986319998704852No Hit
CATAGACCAGACTTTTGAAAGAAGCACATCACTTATACGCCTCCCTGTCT2900.4694911687092231No Hit
CATAGATGCATCAGCAACTCACAGATTGCATAGCCATGCTGAAGTCCCAT2770.44844501287053373No Hit
CATAGATTGCATAGCCATGTGTAGCCAGATGATATGAACCCAAAGGTCTA2520.4079716362576697No Hit
CATAGAATCCTTTCCCCATTGCTTGTCTGTGACAGCTTCCACATGATGGA2300.37235506483834935No Hit
CATAGACATGCTAACATTTCTGGGGATCATGCTAACATTACTGGGGACTG2250.3642603895157765No Hit
CATAGAGGTGAGCGGCTGTCTCCATCTATGAGACCAACTCAGATGGGATC2200.3561657141932037No Hit
CATAGAGGTGAGCGGCTGTCTCCATGATCTATACACTGACGCCATGCTGA2170.35130890899966No Hit
CATAGACTGTCATTGCTTGCCCATTGACTGTCATTGCTTGCTCATTATTA2140.34645210380611635No Hit
CATAGAGGTGAGCGGCTGTCTCCAGGTGAGCGGTTGTCTGGGTGGTTTCT1900.30759766225776686No Hit
CATAGAGGCGAGCGGCTGTCTCCATTCAACTTTCCTTGGCTCTATGTGTA1890.3059787271932523No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGCTTCCACATGATGGACATCTA1850.29950298693519406No Hit
CATAGACATGCTAACATTACTGGGGACTGTGACTCTGTTTTCTATGTGTA1770.28655150641907756No Hit
CATAGATTGAGCTTAAATGATCTGTGCAAGACTAGGCAATTTACAAATCT1420.22988877916106784No Hit
CATAGAGCAGAAAACCTTTGAATAACAGAGAGACTTGGTCTCATAGAGCA1390.22503197396752417No Hit
CATAGACCCACTTTCGTGACTTTGTGTAGAACCATGTCGTCAGTGTACTG1330.2153183635804368No Hit
CATAGAATCCTTTCCCCATTGCTTGTTCATTATTATTGGATGGGATCTAT1270.20560475319334942No Hit
CATAGACTGTCATTGCTTGCCCATTGTTGGAAGTTAGGAAGCCAGCTCTA1260.20398581812883484No Hit
CATAGAGGTGAGCGGCTGTCTCCACACTGGACAATGAGAGGATCTATGTG1250.20236688306432027No Hit
CATAGAACGGCCTTCCTGTATCAGTCAGTGTGGAAGTACACAAAAAGGGC1210.19589114280626202No Hit
CATAGATTGCATAGCCATGTGTAGCCCTAAAGCCCTTGTGAAGTTCTATG1200.19427220774174747No Hit
CATAGAGGCGAGCGGCTGTCTCCAGATGATATGAACCCAAAGGTCTATGT1110.17970179216111642No Hit
CATAGATTGAGCTTAAATGATCTGTGCAGCTTCCACATGATGGACATCTA1090.1764639220320873No Hit
CATAGACATGCTAACATTTCTGGGGATAACTTGGTCTCATAGACATGCTA1080.17484498696757272No Hit
CATAGAATAGCCAGCAGAAGGAAGCATGTCGTCAGTGTACTGGGGACTGT1070.17322605190305818No Hit
CATAGATTTAAAATAAAATTCCTGGATAGATCATTTAGAGCAGGAATTAG1010.1635124415159708No Hit
CATAGACCAGACTTTTGAAAGAAGCACACATAGATTGGAACTTTGCCCCA970.15703670125791255No Hit
CATAGAATCCTTTCCCCATTGCTTGCCATGCTGAAGTCCCATGATCTATG890.14408522074179606No Hit
CATAGATTGCATAGCCATGTGTAGCCATGTGTAGCCATGTGTAGCCATGT860.13922841554825238No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATTCTATGAGACCAACTCAGATGG820.13275267529019413No Hit
CATAGAGGTGAGCGGCTGTCTCCACCATGGTTCTACACATAGATTGGAAC810.13113374022567956No Hit
CATAGAGGCGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA780.12627693503213586No Hit
CATAGATTGCATAGCCATGTGTAGCCAAACTGGACAATGAGAGGATCTAT770.1246579999676213No Hit
CATAGAGGTGAGCGGCTGTCTCCATAGATTGCATAGCCATGCTGAAGTCC750.12142012983859217No Hit
CATAGAGGCGAGCGGCTGTCTCCAAACTGGACAATGAGAGGATCTATGTG750.12142012983859217No Hit
CATAGAGGTGAGCGGCTGTCTCCATGATCTATGTGTAGAACCATGTCGTC740.11980119477407762No Hit
CATAGATATGCCCATGGTTAGGAAGGCTGGCAAAGTTCCAATCTATGTGT720.1165633246450485No Hit
CATAGATATGCCCATGGTTAGGAAGCCATGCTGAAGTCCCATGATCTATG710.11494438958053392No Hit
CATAGAATAGCCAGCAGAAGGAAGCATTCGTCAGTGTGTTGTCTGTGACA690.1117065194515048No Hit
CATAGATTGCATAGCCATGTGTAGCCATGCTGAAGTCCCATAATCTATGT660.10684971425796111No Hit
CATAGAGGTGAGCGGCTGTCTCCATCACTTATACGCCTCCCTGTCTATGT660.10684971425796111No Hit
CATAGACCCACTTTCGTGACTTTGTGTAGAACCATGTCGTCAGTGTGGTT630.10199290906441742No Hit
CATAGAGCAGAAAACCTTTGAATAACAGATGATATGAACATAGCCTTTGG630.10199290906441742No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)