FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807864

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807864
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73184
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2843038.847289024923484No Hit
CATAGAAGAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG38355.240216440752077No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACCAAAAACAATACAAAAAT14842.0277656318320942No Hit
CATAGAGGGTGCTCCTGTGCTGGGTAGTGGTAGTCTATGAGACCAAGTCT14251.9471469173589857No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTAAAGTGCTGTACTT13621.8610625273283776No Hit
CATAGACTTCAGCCCTCACAAGCCTTACCTCAAATGCCAGGCTCTATGAG11641.590511587232182No Hit
CATAGACACATGTAGGATGGGGTGGAGGATGATCAATGCTGCTTCTATGA10331.4115107127240927No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG8501.1614560559685179No Hit
CATAGAGGGTGCTCCTGTACTGGGTAGTGGTAGTCTATGAGACCAAGTCT7991.0917686926104067No Hit
CATAGACACATGTAGGATGGGGTGGCTGGGCATTGCTCTTGACATCTCTA7851.0726388281591603No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCACAGC6580.8991036292085702No Hit
CATAGACACATGTAGGATGGGGTGGCTTCCCTTACACCTTCTGCCATGAT6130.8376147791867075No Hit
CATAGACTTCAGCCCTCACAAGCCTTGGTATATTTTCTAAAGCCTGGGAT5950.8130192391779624No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTAGTCTATGAGACCAAGTCT5520.7542632269348492No Hit
CATAGAAAGTCTGGACCAAGTGCCTCAAGTCTGGAGGATGATCAATGCTG4730.6463161346742458No Hit
CATAGATCATGGGACTTCAGCATGGGCATTGCTCTTGACATCTCTATGAG3720.5083078268473983No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGCTTGGAGGATGATCAATGC3700.505574989068649No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTATATTTTCTAAAGCCTGGGATC3210.4386204634892873No Hit
CATAGACACATGTAGGATGGGGTGGGCATTGCTCTTGACATCTCTATGAG3070.4194905990380411No Hit
CATAGAGCTATCTGGCAAAAACCCATCACACTGCCATGATTGTAAGTTTC3040.4153913423699169No Hit
CATAGAAGCATGGAAGACAAACAGCATGGCGGTGTTTGCAGATTTGGACC2760.3771316134674246No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCCCAGCACTTT2660.3634674245736773No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCACAGCACTTT2650.3621010056843026No Hit
CATAGACACATGTAGGATGGGGTGGCCTCTCCTTCACTTTCTGCCATGAT2610.35663533012680365No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAGTAATAGCACTTT2510.3429711412330564No Hit
CATAGACTTCAGCCCTCACAAGCCTTAGGTCAAGGTGGGAGGATGGTCTA2480.3388718845649322No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTATATTTTCTAAAGCCTGGG2450.33477262789680806No Hit
CATAGATCATGGGACTTCAGCATGGCTAGACCCAGACCCCCGGATCTGAC2270.310177087888063No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAAAATACAAAAATTA1940.265085264538697No Hit
CATAGAGCTATCTGGCAAAAACCCATCTAAAAAAATACAAACATTAGCCA1910.2609860078705728No Hit
CATAGAAGCATGGAAGACAAACAGCACAACAAGACTGAAAATTCCTAAAA1860.25415391342369914No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGCTGGAGGATGATCAATGCT1840.2514210756449497No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTATAATTCCAGC1840.2514210756449497No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTAAAAAAATTACAAAAATTAG1820.24868823786620026No Hit
CATAGAGCATTACCCTCAAACTATCCCTACTTGGTCTCTGACTGTGTTAA1820.24868823786620026No Hit
CATAGACTTCAGCCCTCACAAGCCTTCAAATAAAAAAGATTTAAAATCCA1810.24732181897682554No Hit
CATAGAAGAGTGAGACTTGAGATGGGAGTTCTATGTGTACCAGTAGCAAG1710.23365763008307824No Hit
CATAGAAGAGTGAGACTTGAGATGGGAGGATGAGGTCAAGGTGGGAGGAT1690.2309247923043288No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTATAAAAAATATGCAAAATTA1610.219993441189331No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTATAATTCCAGC1590.21726060341058154No Hit
CATAGACACATGTAGGATGGGGTGGCCACCAGTTTGGACAGTTCTGTTTG1590.21726060341058154No Hit
CATAGAAAATAATGTGGCCGGGCATTGCTCTTGACATCTCTATGAGACCA1580.2158941845212068No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC1550.21179492785308265No Hit
CATAGACACATGTAGGATGGGGTGGCTGTCATGATTATCACCTTCTATGA1540.2104285089637079No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAATGCCATCACAGTTCATTGTA1530.20906209007433318No Hit
CATAGAGGTGTCCTTTCCCCACTTTACACTGACGACATGGTTCTACACAT1500.204962833406209No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1420.1940314822912112No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAATATACAAAAATTAG1400.19129864451246176No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1360.18583296895496282No Hit
CATAGAAAATAATGTGGCCGGGCATGGTAGCTCATGCCTGTAATCCCAGT1340.18310013117621338No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1280.17490161783996502No Hit
CATAGAAAATAATGTGGCTGGGCATTGCTCTTGACATCTCTATGAGACCA1270.1735351989505903No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG1250.17080236117184086No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAACCCTAGCACTTT1240.1694359422824661No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGC1240.1694359422824661No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1220.16670310450371664No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1200.1639702667249672No Hit
CATAGACACATGTAGGATGGGGTGGCATGGAGGATGATCAATGCTGCTTC1190.16260384783559248No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1190.16260384783559248No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCCCAGC1140.15577175338871885No Hit
CATAGAGCTATCTGGCAAAAACCCATATCTACCAAAAACAATACAAAAAT1130.15440533449934413No Hit
CATAGAACCAAAAATGGCTAGGCATGTGGCTCACACCTGTAATCACAGCA1110.15167249672059469No Hit
CATAGAACCAAAAATGGCTAGGCATGGTGGCTCACACCTGTAATCACAGC1060.14484040227372103No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1060.14484040227372103No Hit
CATAGAACCAAAAATGGCTAGGCATGTTCCATGTGTGTGCGATGTTCTAT1050.1434739833843463No Hit
CATAGAAGAGTGAGACTTGAGATGGGAGGATGGTCTATGAGACAGGTCAA1040.14210756449497158No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAATTAGCTGGGCGTG1030.14074114560559686No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAACTACAAAAAGAAA1000.13664188893747267No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTATTATCCTAGCACTTT990.13527547004809795No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG980.13390905115872323No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGTTTTTGTTTGCTTTGTTGAAGA970.1325426322693485No Hit
CATAGAAAAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG960.13117621337997376No Hit
CATAGAACCAAAAATGGCTAGGCATGTTGGCTCACACCTGTAATCACAGC950.12980979449059904No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGTTCACTCCTGTAATCCCAGC950.12980979449059904No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGAGGATGATCAATGCTGCTTCTAT930.12707695671184957No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAATCCCAGCACTTT930.12707695671184957No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAAATACAAAAATTAG930.12707695671184957No Hit
CATAGACACATGTAGGATGGGGTGGAGACAGCCGCTCACCTCTATGAGAC910.12434411893310013No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTACCGTATGGAGACAGCCGCT860.1175120244862265No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAGACAGGATGCGCAGATGGTCT830.11341276781810232No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG810.11067993003935288No Hit
CATAGAACCAAAAATGGCTAGGCATGGGCATTGCTCTTGACATCTCTATG810.11067993003935288No Hit
CATAGACTGGTCTCGAACTCCCAACCTCAGGGTGATCTGCCCACCTTTGC760.10384783559247923No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCGTGTCATCCCAGCCCTTT760.10384783559247923No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGACGCAGGTCAAGGT740.10111499781372978No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAAAGGTAGATAAATCCAGGAAG740.10111499781372978No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGGAGGATGATCAATGCTGCT740.10111499781372978No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)