FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807873

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807873
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences100103
Sequences flagged as poor quality0
Sequence length150
%GC38

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCATTCAACTTTCCTTGGCTCTATGTGTA73017.293487707661109No Hit
CATAGAGGTGAGCGGCTGTCTCCAGATGATATGAACCCAAAGGTCTATGT61366.129686422984326No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA59105.903918963467628No Hit
CATAGATTGCATAGCCATGTATAGCCCCTAAGCCCAGGTCTATGTGTAGA50575.051796649451065No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAGCCCAGGTCTATGTGTAGA46564.651209254467898No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGTGTAG40814.07680089507807No Hit
CATAGATTGCATAGCCATGTGTAGCCATGCTGAAGTCCCATGATCTATGT38893.8849984515948575No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAAGCCCTTGTGAAGTTCTAT29122.909003726162053No Hit
CATAGACATGCTAACATTTCTGGGGATACTGGGGACTGTGACTCTGTTTT26562.653267134851103No Hit
CATAGAGGTGAGCGGCTGTCTCCAAACTGGACAATGAGAGGATCTATGTG20802.0778598044014664No Hit
CATAGACATGCTAACATTTCTGGGGATAGAGACTTGGTCTCATAGACATG19251.9230192901311651No Hit
CATAGAGGTGAGCGGCTGTCTCCACACTGAACATAGCCTTTGGGGTTTCT17581.7561911231431626No Hit
CATAGAATAGCCAGCAGAAGGAAGCATCACTTATACGCCTCCCTGTCTAT17481.7462014125450787No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGCTTCCACATGATGGACATCTA16221.6203310590092206No Hit
CATAGACATGCTAACATTTCTGGGGATATTACTGGGGACTGTGACTCTGT15541.5524010269422495No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATCATCACTTATACGCCTCCCTGT12351.2337292588633708No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATCGTCTCAGCCCAAAATCTCTCT12001.1987652717700767No Hit
CATAGAGCAGAAAACCTTTGAATAACAGATAGAGCAGGAATTAGACTCTT11101.1088578763873211No Hit
CATAGAATCCTTTCCCCATTGCTTGTTGTCTGTGACAGCTTGTATACATC10511.0499185838586256No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGGAATTAGACTCTTGACATCTATG10051.0039659151074394No Hit
CATAGATTGAGCTTAAATGATCTGTGCAACCCCTTAAGAAAATTTAATTG9740.9729978122533791No Hit
CATAGATTGAGCTTAAATGATCTGTGCAAGACTAGGCAATTTACAAATCT9310.9300420566816179No Hit
CATAGAGGTGAGCGGCTGTCTCCATCACTTATACGCCTCCCTGTCTATGT9160.915057490784492No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATGGAAGTACAC8850.8840893879304316No Hit
CATAGAATCCTTTCCCCATTGCTTGCTCATTATTATTGGATGGGATCTAT8780.8770965905117729No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGCTCTATGTGTAGAACCATTGG8200.8191562690428857No Hit
CATAGACTGCCTCAGCCTCCTGAGTATGTGTAGAACCATGTCGTCAGTGT7880.7871891951290171No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAATGGAAGTACACAAAAAGG6960.6952838576266446No Hit
CATAGACTGTCATTGCTTGCCCATTGCTCATTATTATTGGATGGGATCTA6650.6643157547725842No Hit
CATAGAGCAGAAAACCTTTGAATAACAGATACGGGAGCAGGAATTAGACT6430.6423383914567995No Hit
CATAGACCTCCTGTTTGACCATTTTGAACATAGCCTTTGGGGTTTCTATG6250.6243569123802483No Hit
CATAGACATGCTAACATTACTGGGGACTGTGACTCTGTTTTCTATGTGTA5970.5963857227056132No Hit
CATAGAGGTGAGCGGCTGTCTCCATGTCGTCAGTGTGCCATGCTGAAGTC5290.5284556906386422No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAATGGAAGTACACAAAAAGGG5170.5164680379209414No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGCTCTATGTGTAGTTGGAAGTT5110.510474211562091No Hit
CATAGACCATCCAGAGGTAATTCTGCTCATTATTATTGGATGGGATCTAT4860.4854999350668811No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGTGTGG4310.43055652677741924No Hit
CATAGAGTTCAAATGGCCAATCAGGTACACTGACGCCATGCTGAAGTCCC4290.42855858465780244No Hit
CATAGAATCCTTTCCCCATTGCTTGTTCATTATTATTGGATGGGATCTAT3740.37361517636834063No Hit
CATAGATGCATCAGCAACTCACAGATTTCTTCAGAATCTATGTGTAGAAC3720.3716172342487238No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATTCTATGAGACCAACTCAGATGG3640.3636254657702566No Hit
CATAAATTCAACAGGCTTTCATCTATGTGTAGAACCATGTCGTCAGTGTA3620.3616275236506399No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTTGGAAGTTAGGAAGCCAGC3500.3496398709329391No Hit
CATAGACCAGACTTTTGAAAGAAGCACATGGAAGTACACAAAAAGGGCAT3450.3446450156338971No Hit
CATAGATGCATCAGCAACTCACAGATTGCATAGCCATGCTGAAGTCCCAT3340.3336563339760047No Hit
CATAGATTGCATAGCCATGTGTAGCCAGATGATATGAACCCAAAGGTCTA3260.32566456549753753No Hit
CATAGACTGTCATTGCTTGCCCATTGTCATTGCTTGCTCATTATTATTGG3130.31267794172002833No Hit
CATAGATTGCATAGCCATGTGTAGCCCTAAAGCCCTTGTGAAGTTCTATG3120.31167897066022No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAGCCCAGGTCTAT3090.3086820574807948No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGCTTCCACATGATGGACATCTATG2970.296694404763094No Hit
CATAGACATGCTAACATTTCTGGGGATTGTGACTGGGGACTGTGACTCTG2920.291699549464052No Hit
CATAGATATGCCCATGGTTAGGAAGGCCTTTCTATGAGACCAACTCAGAT2870.28670469416501004No Hit
CATAGATTGAGCTTAAATGATCTGTGCAGCTTCCACATGATGGACATCTA2820.28170983886596807No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGCTCATTATTATTGGATGGGA2740.27371807038750084No Hit
CATAGAGGTGAGCGGCTGTCTCCAACACTGACGCCATGCTGAAGTCCCAT2680.26772424402865047No Hit
CATAGAGGTGAGCGGCTGTCTCCAACCCCTTAAGAAAATTTAATTGTCTA2540.25373864919133293No Hit
CATAGAAGTTCTGATCCACATTCACGTATACGCCTCCCTGCTATGTGTAG2490.24874379389229093No Hit
CATAGAGGTGAGCGGCTGTCTCCAGGCATGTTGTCTGTGACAGCTTGTAT2480.24774482283248253No Hit
CATAGACCCACTTTCGTGACTTTGTGTAGAGCCATGCTGAAGTCCCATGA2420.24175099647363216No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGCTCTATGTGTAGAACCATGTT2230.2227705463372726No Hit
CATAGAGGTGAGCGGCTGTCTCCATGATCTATGTGTAGAACCATGATCTA2050.20478906726072144No Hit
CATAGAGGCGAGCGGCTGTCTCCATTCAACTTTCCTTGGCTCTATGTGTA2020.20179215408129628No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTCTCTCTATCTGATTTCTTCAGA2010.20079318302148788No Hit
CATAGATTGCATAGCCATGTGTAGCCAAACTGGACAATGAGAGGATCTAT1940.19380038560282908No Hit
CATAGATTTAAAATAAAATTCCTGGATAGATCATGGGACTTCAGCTTCCA1850.18480964606455352No Hit
CATAGAGGCGAGCGGCTGTCTCCAGATGATATGAACCCAAAGGTCTATGT1840.18381067500474513No Hit
CATAGAGTTCAAATGGCCAATCAGGTGGTCTCATAAATTCAACAGGCTTT1680.16782713804781077No Hit
CATAGAGGCGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA1650.16483022486838556No Hit
CATAGATATGCCCATGGTTAGGAAGCCATGCTGAAGTCCCATGATCTATG1630.16283228274876876No Hit
CATAGACTTCCTTGCCCCCATTTATTACACTGAATGAGAGTCCCTGTTGC1490.1488466879114512No Hit
CATAGATATGCCCATGGTTAGGAAGGGCATCTATGTGTAGAACCATGTCG1400.1398559483731756No Hit
CATAGACCCACTTTCGTGACTTTGTGTAGAACCATGTCGTCAGTGTAGAA1300.12986623777509165No Hit
CATAGAGGTGAGCGGCTGTCTCCAATCTATGTGTAGAACCATGTCGTCAG1270.12686932459566647No Hit
CATAGAGGTGAGCGGCTGTCTCCATCTATGAGACCAAGGCCATGCTGAAG1180.11787858505739089No Hit
CATAGAATCCTTTCCCCATTGCTTGTCTGTGACAGCTTCCACATGATGGA1170.1168796139975825No Hit
CATAGACCCTTACCAATAACACAATCAACACTGACGACCAACTCAGATGG1030.10289401916026492No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)