FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807875

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807875
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences127529
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT1378810.81165852472771No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG78126.125665534897945No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG76546.001772145943276No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG63835.005136086694007No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG50643.970861529534459No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC46053.6109433932674135No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA37072.9067898281959397No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA36192.8377859153604277No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG32902.579805377600389No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC30632.4018066478996936No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT28752.2543891977510997No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT28402.226944459691521No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA24941.9556336205882583No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG22871.7933175983501792No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT19211.5063240517843No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC15631.2256035882034675No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC15341.2028636623826738No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG13021.020944255816324No Hit
CATAGAACATTGATTCCTGGCATGTCCCATGATTTACCATCACAAATTTT12680.9942836531298763No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT10770.8445137968618902No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT9940.7794305608920324No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAGCCCGTTCTCTCTGTT9870.7739416132801167No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT9810.7692368010413317No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG8680.6806295038775495No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT8570.6720040147731104No Hit
CATAGATTCAGAGAAGGACAGCGTGGTCACATAGGTTGCTAGACAGATTT8530.6688674732805872No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC7480.5865332591018514No Hit
CATAGACCCCATGACTCAGCTCCTCACTCTCCCACCATTCAGACTCTATG7340.5755553638780199No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG6700.5253706999976476No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT6070.4759701714904061No Hit
CATAGATTCAGAGAAGGACAGCGTGGTGCTGGAATAGTTGGACTCTATGT6030.47283362999788286No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT5540.43441099671447275No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG5380.4218648307443797No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT5240.4108869355205482No Hit
CATAGACCAGTACGCCTTACCCCTTGCATGGTGCTGGAATAGTTGGACTC5120.40147731104297846No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG5120.40147731104297846No Hit
CATAGACCCTCTCTTACCCTTCCACCATAGAATGCCTGGCCAACTGTTTT5070.3975566341773244No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT5070.3975566341773244No Hit
CATAGACCAGTACGCCTTACCCCTTGTCAGACCCAGGCTACACATCTATG4960.3889311450728854No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG4840.3795215205953156No Hit
CATAGACCCTCTCTTACCCTTCCACCCTGGGAGAAGAAATGTTGGTCTAT4820.377953249849054No Hit
CATAGACCAGTTACCACAAGAAGCAATGAGCATGCCTTTGATAAAACATC4710.36932776074461493No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG4380.343451293431298No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCTAGGATTTGAGCTCATG4290.33639407507312064No Hit
CATAGACCCTCTCTTACCCTTCCACCGTATGTTACAAAAATTGGGAAGCG3970.31130174313293446No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG3840.3011079832822338No Hit
CATAGACCCTCTCTTACCCTTCCACCGTATGTATGCTTTATTCTCACGTG3670.28777768193900993No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCAGGCCCTTCAGCATCATTTCT3540.2775839220883093No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA3450.27052670373013193No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC3410.2673901622376087No Hit
CATAGATCTAGCCCATCACTTCAGCAGTAAAGGCTGGGGTCTTGGGTCTA3380.2650377561182163No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG3350.2626853499988238No Hit
CATAGATGGCCCAGAATCCTTTGTAGAACCACCAACATGCTTTTAGTCAC3340.261901214625693No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCAGCCCGTTCTCTCTGTT3130.24543437178994582No Hit
CATAGATTCTTTCCTGGCTGTGGGTGTACACTGTCAGACCCAGGCTACAC3000.23524061193924523No Hit
CATAGACCAGTTACCACAAGAAGCAATGTGGGCTGGTGTTTTCCTTGATC2940.23053579970046031No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG2680.21014827999905902No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2610.20465933238714334No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGGTGGGTTGAGGGAGTC2540.1991703847752276No Hit
CATAGATCTAGCCCATCACTTCAGCATCGCAGGCCCTTCAGCATCATTTC2390.18740835417826535No Hit
CATAGATCTAGCCCATCACTTCAGCATGACTGTTAATATAGAAGAGACAC2280.17878286507382635No Hit
CATAGATGGCAAATGGTGGGATCTCTATACAGTTGTGGAAAGTGCAATGA2230.17486218820817226No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGAGCCCGTTCTCT2160.16937324059625652No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGCTCATGATGGGAGTGTCTGC2160.16937324059625652No Hit
CATAGAGCAAGCCCTCTAAGCCTATCAATCCTGTGTTCATGGCTTCTATG2130.16702083447686408No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAGTTGTGGAAAGTGCAATGAGTC2090.16388429298434082No Hit
CATAGACCAGTTACCACAAGAAGCAATGGGTCATTGTGAGGATTAAATGT2080.16310015761121No Hit
CATAGATTCCTCCAAAGACTGCAGGGGTTGCAACAACAACAAAACTCGTG2040.15996361611868673No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGACTGTTAATATAGAAGAGA1980.15525880387990182No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTACAGTTGTGGAAAGTGCAATG1960.1536905331336402No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACAGTTGTGGAAAGTGC1960.1536905331336402No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG1950.15290639776050938No Hit
CATAGAGCAAGCCCTCTAAGCCTATCACTCTCCCACCATTCAGACTCTAT1890.14820158552172447No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACACACTGTCATTGTGGGTTTTA1850.1450650440292012No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTGTTATAGAAAACAAGGAGAAC1770.13879196104415464No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACGAATGAGGAAACAGGCAC1760.13800782567102385No Hit
CATAGATTCCTCCAAAGACTGCAGGGTGGGTTGAGGGAGTCTTCTCTATG1610.12624579507406158No Hit
CATAGATGAAGGCAGAAAAGGAAGAACATCTGCATTAGGAAGTCTTCTCA1600.12546165970093076No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCAGGC1560.12232511820840751No Hit
CATAGAAGTATTCACACTGGGGCCCAATGCCTGGCCAACTGTTTTTTCTA1520.11918857671588423No Hit
CATAGATGGCAAATGGTGGGATCTCTAAGACCATGGAGAGAATAATCCGT1520.11918857671588423No Hit
CATAGATGACATGGGAAATTATGCTGCTCTATCCCATTGTAGATTTCTTT1480.11605203522336097No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTGCAGGCCCTTCAGCATCAT1400.10977895223831442No Hit
CATAGATCTAGCCCATCACTTCAGCACAGGCCCTTCAGCATCATTTCTAT1380.10821068149205279No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG1380.10821068149205279No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)