FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807886

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807886
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36359
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1841750.65320828405622No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA12113.33067466101928No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC6641.8262328446876979No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT4131.13589482659039No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT4121.13314447592068No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC3931.0808878131961825No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA3160.8691108116284827No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG3100.8526087076102202No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT3040.836106603591958No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC3020.8306059022525372No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG2570.7068401221155697No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA2040.5610715366209192No Hit
CATAGAGAAGAGAAGGCGACAATGGCGTGAACCCGGGAGGCGGAGCTTGT1920.5280673285843945No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG1890.5198162765752633No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1820.5005638218872906No Hit
CATAGAACAATGTAATAAGCATCGGAGGAGGCAGAGATTGCAGTGAGCTG1780.4895624192084491No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTCAGACATGTTTCC1550.4263043538051101No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTATGAGACTCTTCACTATGTCA1460.4015511977777167No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC1460.4015511977777167No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG1380.3795483924200336No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1370.37679804175032316No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATACTTCAGTTGACTATA1360.3740476910806128No Hit
CATAGAACAATGTAATAAGCATCGGAGGAGAGGTCTTGGCAGGCTTGTCT1240.34104348304408816No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCAACAGAACAACAACATC1220.33554278170466734No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG1190.3272917296955362No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGGAGAAAAGGGGACAGCCC1180.3245413790258258No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA1170.3217910283561154No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA1090.29978822299843233No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAAGCACATAGAGCTGCTTTTC1090.29978822299843233No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT980.26953436563161803No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGACGACATGGTGG930.2557826122830661No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG920.25303226161335574No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACTTGGGCAACAGAACAACAA870.23928050826480377No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG850.233779806925383No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG850.233779806925383No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG770.21177700156769988No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACATGGTTCTACACATAGAACCCA760.2090266508979895No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC750.2062763002282791No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACATACACCATGAATACTA750.2062763002282791No Hit
CATAGAACAATGTAATAAGCATCGGAGGACCATGCTCACACCTTGATCTA740.20352594955856873No Hit
CATAGAGGGTGTTTTTCGGTGTCACACACTGACGACATGGTTCTACACAT740.20352594955856873No Hit
CATAGACCCTTAGAGTTTCAGCCTCCAGCAGAATCAGGGTTGGTTCTATG710.19527489754943755No Hit
CATAGAATGCAGGAGAATATACACAGGTTGTAGTGAACCGAGATCAAGCC710.19527489754943755No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG700.19252454687972717No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG700.19252454687972717No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG690.1897741962100168No Hit
CATAGAGGGTGTTTTTCGGTGTCACATATACACCATGGAATACTATGCAG650.17877279353117523No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGTAGAATTAGCGGAGAGTGA610.16777139085233367No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGACGACATGGTTCTAC610.16777139085233367No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTGACGACATGGTGGGT570.15676998817349214No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACGACATGGTTCTACACATAGAAC550.15126928683407134No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG550.15126928683407134No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGATCTGCG540.14851893616436096No Hit
CATAGAGCTATCAGTATACTCCCACCATGAGGAATTCTTGCCAGGGATCT540.14851893616436096No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA530.14576858549465058No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCTGACGACATGGTTCTACACATAG520.1430182348249402No Hit
CATAGACTTGATGCCCAGGAAACCTCGCCTCTACCAAAGATACAAAAAAA470.12926648147638825No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT470.12926648147638825No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC460.12651613080667787No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG450.12376578013696747No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC450.12376578013696747No Hit
TAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCGAG440.12101542946725707No Hit
TATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG440.12101542946725707No Hit
CATAGACCTTCCTGTTGGCCACACAGTCTAATCTCCTCCCCTCTCACTGT440.12101542946725707No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT440.12101542946725707No Hit
CATAGAACCCAAAGAGTGAGCAGCAGGAAGCTCTAACTTCAGTTGACTAT430.11826507879754669No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGGTTGCAGATTTGGACCTGCG430.11826507879754669No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC430.11826507879754669No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTAACAGCCTCCCCCAGTATTT420.11551472812783631No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGTTCTA390.10726367611870515No Hit
CATAGACTTGATGCCCAGGAAACCTCCTGCCCCTGCAGGCTGAAAGTGCC380.10451332544899475No Hit
CATAGATCATGGGACTTCAGCATGGCAGTGTTTGCAGATTTGGACCTGCG370.10176297477928437No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTACAGATTTGGACCTGCG370.10176297477928437No Hit
CATAGATCATGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCGA370.10176297477928437No Hit
CATAGAACCCAAAGAGTGAGCAGCAGTGGTTCTACACATAGAACCCAAAG370.10176297477928437No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)