FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807889

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807889
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences82128
Sequences flagged as poor quality0
Sequence length150
%GC48

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3425941.71415351646211No Hit
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG37464.561172803428794No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCTCTATGTGTAGAACCAT15121.8410286382232612No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGTGATTACAGGTG14701.7898889538281706No Hit
CATAGACTACCACTACCCAGCACAGCTACTTCTCTATGCACTTTGCCACA14551.7716247808299241No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCCATCCTACATGTGTCTATGT13211.6084648353789206No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCTTGTGAGGGCTGAAGTCTATGTG12061.4684395090590299No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTAGCTGAGACCACAGGCA10241.2468342100136371No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGGGAAGCAAACACATC9121.1104617182933958No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACCCCATCCTACATGTGTCTA8321.0130527956360804No Hit
CATAGACTACCACTACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT7890.9606954997077732No Hit
CATAGACTACCACCACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT5720.6964737969998052No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGTG5460.6648158971361777No Hit
CATAGAAGCAGCATTGATCATCCTCCATAGAAGCAGCATTTTAACACAGC5370.6538573933372297No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAAGTGAAGGAGAGGCCAC5000.6088057666082213No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGTGTAAGGGAAGCCAC4350.5296610169491525No Hit
CATAGACCATCCTCCCACCTTGACCTCTTAAGTAGCTGGGACTACAGGTG4160.5065263978180402No Hit
CATAGACCATCCTCCCACCTTGACCTCCCGAGTAGCTGGGACTACAGGTG3830.46634521722189753No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGAAGTCCCATGATCTATGTG3500.4261640366257549No Hit
CATAGAAGCAGCATTGATCATCCTCCATGTGAGCATTTTAACACAGCATT3320.404247029027859No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAGAGTGCTGGAATTATAGGCG3240.3945061367621274No Hit
CATAGACCATCCTCCCACCTTGACCTCCATCTTGACCTCCCAAAGTGCTG3070.37380674069744785No Hit
CATAGACCATCCTCCCACCTTGACCTGCCAAGTAGCTGGGACAACAAGCA3040.3701539060977985No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTATTACTACAGGTG2940.35797779076563413No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAGTAGCTGGGTTTACACGTG2830.34458406390025326No Hit
CATAGACCATCCTCCCACCTTGACCTATCCTCCCATCTCAAGTCTCACTC2810.34214884083382036No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA2770.3372783947009546No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCCATCCTACATGTGTCTATGTG2390.29100915643872977No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCA2370.2885739333722969No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGCCATGGGGAGCCAGC2300.2800506526397818No Hit
CATAGAGGGACGGAGGCAAGAGGATACGGTAGCAGAGGCACTTGGTCCAG2260.27518020650691605No Hit
CATAGACCATCCTCCCACCTTGACCTTCCAAAGTGCTAGGATAATAGGTG2230.2715273719072667No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCG2220.27030976037405025No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGGGCTGGGATGACACGCA2210.2690921488408338No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCTAGCCATTTTTGGTTCTATG2150.2617864796415352No Hit
CATAGAAGGTGATAATCATGACAGCCACCCCATCCTACATGTGTCTATGT2100.25569842197545295No Hit
CATAGACCATCCTCCCACCTTGACCTACAGGATAGTTGAAACTACAGGCG2070.2520455873758036No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAACAGGTACTGGGATTACAGG2040.2483927527761543No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1940.23621663744398985No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1890.23012857977790765No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1880.2289109682446912No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGTAAAGGGGAAGCAAG1800.21917007597895966No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1730.21064679524644458No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAAAGGAAGCAAGCATATC1720.20942918371322813No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCACGCAGAGCCTTCAGGTCA1700.20699396064679526No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA1690.2057763491135788No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1650.20090590298071304No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACACACG1630.19847067991428016No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1570.1911650107149815No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACATTATTTTCTATGTGTAGA1550.18872978764854859No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGAG1550.18872978764854859No Hit
CATAGACCATCCTCCCACCTTGACCTCCCACCTCCTGAGTAGCTGGGATT1530.1862945645821157No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA1510.18385934151568284No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1500.1826417299824664No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA1490.18142411844924994No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1480.18020650691603352No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCACTTGGTCCAGACTTTCTATGTG1400.17046561465030197No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCAGTACAGGAGCACCCTCTAT1370.16681278005065264No Hit
CATAGAGATGTCAAGAGCAATGCCCGGCCACATTATTTTCTATGTGTAGA1320.16072472238457045No Hit
CATAGAGGTGAGCGGCTGTCTCCACACGTCCGCGCAGAGCCTTCAGGTCA1290.1570718877849211No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTAACTGGGCACGCACCAC1280.15585427625170464No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTAGCTGGGACTGTGCATG1260.15341905318527177No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGTTAGGATTACAGGCA1260.15341905318527177No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTAGGATTACAAGTG1250.15220144165205532No Hit
CATAGACCATCCTCCCACCTTGACCTCCAGAGTAGCTGGGATTACAGGCA1210.14733099551918954No Hit
CATAGACCATCCTCCCACCTTGACCTCTCAAAGTGCTAGGGTTACAGGCA1200.14611338398597312No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTAGCTGGGAACCCAGGAG1180.14367816091954022No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGGGATAGTTTGAGGGTAATGC1170.1424605493863238No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTTGGATTACAGGTG1120.13637249172024157No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGTATTACAGGTG1090.13271965712059225No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCTGCGCAGAGCCTTCAGGTCA1090.13271965712059225No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCACCCAGTACAGGAGCACC1010.12297876485486071No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGCAAAAAAGAAGCAGG980.11932593025521136No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGTA970.11810831872199493No Hit
CATAGCGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA940.1144554841223456No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTACCTGGGACTAAAGATG930.11323787258912917No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATGACAGGCA870.1059322033898305No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGCGCCTTCAGGTCA860.10471459185661407No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAGGGCGAAGGGGAAGCAGG840.10227936879018118No Hit
CATAGACCATCTGCGCATCCTGTCTGCTCTTTGACTTATGATGGAGTTCT840.10227936879018118No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)