FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807893

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807893
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences96729
Sequences flagged as poor quality0
Sequence length150
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG74827.735012250721087No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT70147.25118630400397No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT59106.109853301491796No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG46144.77002760289055No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT28782.975322809085176No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT27132.8047431483836283No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG26832.7737286646197106No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT19011.9652844545069215No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT18861.9497772126249626No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT17871.847429416204034No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT17651.8246854614438275No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT16141.6685792264987749No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT15461.598279729967228No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG15041.554859452697743No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC13291.3739416307415562No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC12261.267458569818772No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG9831.0162412513310384No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG9570.9893620320689762No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT9310.9624828128069143No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT8850.9149272710355736No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA8490.8777098905188723No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG8170.8446277745040267No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG8000.82705290037114No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT7790.8053427617363976No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC7210.7453814264594899No Hit
CATAGACAATTTCAGTGCGGCCGATGGGTAGAATCTTGAACTCAGGAGTC6940.7174683910719639No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT6250.6461350784149531No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC6240.6451012622894892No Hit
CATAGAAAAGGGAGGGATTACGGGTGTCTGGCACAATGAGGCAATCTATG6090.6295940204075303No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT6010.6213234914038189No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT5480.5665312367542309No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT5280.5458549142449524No Hit
CATAGATGAGGGATGTAGGCTGTACACTACGGTAGGTGGCTTCTGGTGCA5270.5448210981194885No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT5100.5272462239866017No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA4690.48485976284258087No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA4580.47348778546247766No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG4500.46521725645876627No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTTACGGTAGCAGAGTGGGAGT4490.46418344033330233No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCATGCTGAAGTCCCATGATCTAT4020.41559408243649787No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC3870.400086840554539No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT3820.39491775992721934No Hit
CATAGATGAAAACATTCCGAAGCTAGATCAGTGTGTCCTCTTCACCTCCC3660.37837670191979655No Hit
CATAGACACTTGACCATGCCCTTGTTCTTGTCCCCTATTACTGAAAGTTC3570.3690723567906212No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC3560.3680385406651573No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTGATTTAGGAAGCAGGGTTCTAT3550.36700472453969335No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA3520.3639032761633016No Hit
CATAGAAGGGGTGATGCTCTGATGGATAGGCTATCTTCTGCTGCACTGCT3480.3597680116614459No Hit
CATAGATGAAAACATTCCGAAGCTAGATCAAGTCTATGACTTTACCCTGG3470.35873419553598196No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTAGGTAGGTGGCTTCTGGTGCATC3330.34426076977948705No Hit
CATAGAACCAACCAATAATAATGTGCTTGTTGATTTAGGAAGCAGGGTTC3310.3421931375285592No Hit
CATAGACCAGGACAATCACAGGGCAGGGCTGCATGGTGACTTTTCTATGT3110.32151681501928064No Hit
CATAGAGAAGGAAAACTGGGCTGTGGCTCCCTGTCCTCTTCACCTCCCAG3010.3111786537646414No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT3010.3111786537646414No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT3010.3111786537646414No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTATGTGAGTGCCAAATCTATG2990.30911102151371356No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA2950.30497575701185786No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTAGAATCTTGAACTCAGGAGTCT2920.3018743086354661No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC2630.2718936409970123No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT2570.2656907442442287No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGTACGGTAGCAGCTCCTCTTCTC2570.2656907442442287No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGGGCTGCATGGTGACTTTTCTA2530.26155547974237303No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG2490.25742021524051734No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG2490.25742021524051734No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT2480.2563863991150534No Hit
CATAGACAGGGGCCAGAACTCCTAAGACTTGGTCTCATAGACAGGGGTGT2430.25121731848773377No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTACGGTAGCAGAGTGGGAGTC2390.24708205398587807No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT2360.24398060560948628No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA2350.24294678948402237No Hit
CATAGAACTAGTTCCAGCACCACCAGACCTTCATCGCATTCTTTCTCCAG2330.24087915723309453No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG2330.24087915723309453No Hit
CATAGAACTAGTTCCAGCACCACCAGGAGTTGACAAACGACAGCTTCTAT2300.23777770885670277No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGGCTGCATGGTGACTTTTCTATG2260.23364244435484707No Hit
CATAGAACTGACCATACACTTGCCCTGTTGCAGGATGAATGGGGACATCT2260.23364244435484707No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC2160.2233042831002078No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC2110.21813520247288817No Hit
CATAGAGAAGGAAAACTGGGCTGTGGGTCCCAAAGTAGGCAATTCTATGT1980.20469559284185718No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT1980.20469559284185718No Hit
CATAGAAAAGTGTATTATGGGCCCAGGTTGCAGGATGAATGGGGACATCT1970.20366177671639324No Hit
CATAGACACTTGACCATGCCCTTGTTCAGACACTTGAAAGCTCCCTGGAT1970.20366177671639324No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAACTCAGGAGTTGACAAACG1940.20056032834000143No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG1880.19435743158721788No Hit
CATAGAACTGACCATACACTTGCCCTACGGTTGCAGGATGAATGGGGACA1880.19435743158721788No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT1870.19332361546175397No Hit
CATAGACTTGTTGCCGAGACTGGAGTACGTTGCAGGATGAATGGGGACAT1700.17574874132886725No Hit
CATAGACGTGTGGTTGGGATGTCAGCTAAGAAAGAAAACCCACAAAAGAC1690.17471492520340334No Hit
CATAGACACTTGACCATGCCCTTGTTCCATAGACACTTGAAAGCTCCCTG1650.17057966070154762No Hit
CATAGATGGGTCCCATTCTGTTTGCAGTCTCATAGATGGGTCCCAAAGTA1620.16747821232515586No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTGGAGCTAGGAGTTGACAAACGAC1550.16024149944690838No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGCCGGAAAACCTGTGTGTGTA1540.15920768332144444No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGCCAGGCTAGGCCTCCAAGGCT1530.1581738671959805No Hit
CATAGAGAAGGAAAACTGGGCTGTGGTGTTCTGTCGACAGGGGTGTGGTG1510.15610623494505266No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT1490.1540386026941248No Hit
CATAGAACTAGTTCCAGCACCACCAGTCTCATAGATGGGTCCCAAAGTAG1480.1530047865686609No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTACACTGAACGAAATTTAGGTGAG1430.14783570594134127No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC1420.14680188981587736No Hit
CATAGAAGAGAACCAAAAATGGACCCAAGGTCAAGGGCAGGGATTCTATG1350.13956517693762988No Hit
CATAGACAATTTCAGTGCGGCCGATGGGTCCCAAAGTAGGCAATTCTATG1290.13336228018484633No Hit
CATAGACCAGGACAATCACAGGGCACGGGGTCCCCAGGAGGCAGAAAAGG1190.12302411893020708No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG1120.1157874060519596No Hit
CATAGAACTCTTACCCTTTTGCCAGGGAACAGAGTGGGAGTCATTCATGA1090.11268595767556781No Hit
CATAGACACTTGACCATGCCCTTGTTCGACTTGGTCTCATAGACACTTGA1080.1116521415501039No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC1080.1116521415501039No Hit
CATAGAGGCCATTCTTCTCATGCTGGTGTCCTCTTCACCTCCCAGATCTA1030.10648306092278428No Hit
CATAGATGAGGGATGTAGGCTGTACACTGCTCACGATGGTATTACATGGT1000.1033816125463925No Hit
CATAGAACCTCAAGCCGGAAAACCTGTGTGTGTAAGTGGGTCTATGTGTA990.10234779642092859No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)