FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807894

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807894
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences75627
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3062240.490829994578654No Hit
CATAGAAGAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG34454.555251431367104No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACCAAAAACAATACAAAAAT18392.4316712285294932No Hit
CATAGACTTCAGCCCTCACAAGCCTTACCTCAAATGCCAGGCTCTATGAG15972.1116796911156066No Hit
CATAGAGGGTGCTCCTGTGCTGGGTAGTGGTAGTCTATGAGACCAAGTCT13941.8432570378304043No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTAAAGTGCTGTACTT12001.586734896267206No Hit
CATAGACACATGTAGGATGGGGTGGAGGATGATCAATGCTGCTTCTATGA10881.438639639282267No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG8711.1517050788739471No Hit
CATAGAGGGTGCTCCTGTACTGGGTAGTGGTAGTCTATGAGACCAAGTCT7881.0419559152154654No Hit
CATAGACACATGTAGGATGGGGTGGCTGGGCATTGCTCTTGACATCTCTA7681.0155103336110118No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCACAGC6670.8819601465085221No Hit
CATAGACACATGTAGGATGGGGTGGCTTCCCTTACACCTTCTGCCATGAT6020.7960120062940483No Hit
CATAGAGCTATCTGGCAAAAACCCATCTAAAAAAATACAAACATTAGCCA5850.7735332619302631No Hit
CATAGAAAGTCTGGACCAAGTGCCTCACTGACGACATGGTATATTTTCTA5610.741798564004919No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTAGTCTATGAGACCAAGTCT5320.7034524706784614No Hit
CATAGACACATGTAGGATGGGGTGGCCTCTCCTTCACTTTCTGCCATGAT3720.49188781784283386No Hit
CATAGATCATGGGACTTCAGCATGGGCATTGCTCTTGACATCTCTATGAG3690.4879209806021659No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAGTAATAGCACTTT3260.431062980152591No Hit
CATAGAGGTGTCCTTTCCCCACTTTACTCAGCACTTCTCCTTCCTGTTGC3240.4284184219921457No Hit
CATAGACACATGTAGGATGGGGTGGGCATTGCTCTTGACATCTCTATGAG3220.4257738638317003No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCACAGCACTTT3120.4125510730294736No Hit
CATAGAAGAGTGAGACTTGAGATGGGACAGCCAGTAGCAAGATAGGACAG2890.38213865418435217No Hit
CATAGAAGAGTGAGACTTGAGATGGGAGGATAGGTCAAGGTGGGAGGATG2870.3794940960239068No Hit
CATAGAGGTGTCCTTTCCCCACTTTACACTGCCATCACAGTTCATTGTAT2860.3781718169436841No Hit
CATAGAAGCATGGAAGACAAACAGCATGGCGGTGTTTGCAGATTTGGACC2730.36098218890078937No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCCCAGCACTTT2460.32528065373477727No Hit
CATAGAAAGTCTGGACCAAGTGCCTTACCTCAAATGCCAGGCTCTATGAG2250.29751279305010114No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGCTTCTATGGAGGATGATCA2180.28825683948854247No Hit
CATAGAACCAAAAATGGCTAGGCATGGGCATTGCTCTTGACATCTCTATG2050.2710672114456477No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTATTATCCTAGCACTTT2010.26577809512475703No Hit
CATAGACACATGTAGGATGGGGTGGCTCACGTGTGTAATCTCAGCACTTT1740.23007655995874488No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1620.21420921099607285No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAACCCTAGCACTTT1610.21288693191585015No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTATAATTCCAGC1560.2062755365147368No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTCTGACTGTGTTAATTTAAAAGAA1540.20363097835429145No Hit
CATAGAAAATAATGTGGCCGGGCATTGCTCTTGACATCTCTATGAGACCA1520.20098642019384613No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGC1460.19305274571251008No Hit
CATAGAGGTGTCCTTTCCCCACTTTACACTGACGACATGGTTCTACACAT1440.19040818755206473No Hit
CATAGAAAATAATGTGGCTGGGCATTGCTCTTGACATCTCTATGAGACCA1430.18908590847184206No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTATAATTCCAGC1420.1877636293916194No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1400.18511907123117405No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTTCCTCTCCAAAGGATCACAACTC1310.17321855950917No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1310.17321855950917No Hit
CATAGACACATGTAGGATGGGGTGGCTTGGCTGCCTGGCAGGCTTGGCTG1300.17189628042894733No Hit
CATAGACACATGTAGGATGGGGTGGCTGTCATGATTATCACCTTCTATGA1270.16792944318827932No Hit
CATAGAACCAAAAATGGCTAGGCATGGTGGCTCACACCTGTAATCACAGC1260.16660716410805665No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTGACTGTGTTAATTTAAAAGAACA1260.16660716410805665No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAAATACAAAAATTAG1200.15867348962672062No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1190.15735121054649795No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1190.15735121054649795No Hit
CATAGAAAATAATGTGGCCGGGCATGGTAGCTCATGCCTGTAATCCCAGT1180.15602893146627528No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACACAAGATATGAAAAATAA1140.1507398151453846No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTATATTTTCTAAAGCCTGGG1140.1507398151453846No Hit
CATAGAAGCATGGAAGACAAACAGCATGGGCATTGCTCTTGACATCTCTA1120.14809525698493925No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCGTGTCATCCCAGCCCTTT1110.14677297790471655No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG1100.1454506988244939No Hit
CATAGAACCAAAAATGGCTAGGCATGTGGCTCACACCTGTAATCACAGCA1100.1454506988244939No Hit
CATAGAGGGTGCTCCTGTACTGGGTGTGGGTGGATGTGGGGTCTGTGCGT1090.14412841974427124No Hit
CATAGAGCTATCTGGCAAAAACCCATATCTACCAAAAACAATACAAAAAT1080.14280614066404856No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAACTACAAAAAAATT1070.14148386158382587No Hit
CATAGAACCAAAAATGGCTAGGCATGTTGGCTCACACCTGTAATCACAGC1060.1401615825036032No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAAAATACAAAAATTA1060.1401615825036032No Hit
CATAGACTGGTCTCGAACTCCCAACCTCAGGGTGATCTGCCCACCTTTGC1030.1361947452629352No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1020.1348724661827125No Hit
CATAGAAGCATGGAAGACAAACAGCACAAAAAGGCTGAAAATTCCAAAAA1010.13355018710248984No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG970.12826107078159915No Hit
CATAGAAAAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG960.12693879170137648No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG960.12693879170137648No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG940.12429423354093115No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGACGCAGGTCAAGGT920.1216496753804858No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCCCAGC920.1216496753804858No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAAGTTAATTAAAAAA910.12032739630026314No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC880.11636055905959511No Hit
CATAGACACATGTAGGATGGGGTGGCACTGGGGGCAGAAATGGAGTCACT870.11503827997937244No Hit
CATAGACTTCAGCCCTCACAAGCCTTTTGTGAGGATCGGCTGAGATAATG840.11107144273870442No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAAAATCAGCTGGGCA810.10710460549803642No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG800.10578232641781375No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGAGGATGATCAATGCTGCTTCTAT780.1031377682573684No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGTTCACTCCTGTAATCCCAGC780.1031377682573684No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)