FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807912

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807912
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences152323
Sequences flagged as poor quality0
Sequence length150
%GC38

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA148949.77790615993645No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG81415.344563854440891No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC73544.8278986101901875No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG66224.34734084806628No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG64514.235079403635695No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG47843.140694445356249No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA42242.7730546273379595No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA39972.6240292011055453No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG35642.3397648418164034No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA30522.003637008199681No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT27881.8303210939910584No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA27151.7823966177136743No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC23161.5204532473756427No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA22821.498132258424532No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC21591.4173827983955147No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT20941.3747103195183918No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG19451.2768918679385253No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT19321.2683573721631007No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC17791.1679129218831037No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC17781.167256422208071No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT17311.1364009374815358No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG16451.0799419654287272No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG15110.9919710089743506No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA14520.9532375281474236No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGAAGGGTAAGAGAGGGTCTAT14090.9250080421210191No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA12680.832441587941414No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT12540.8232505924909567No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA11870.7792651142637684No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT9870.6479651792572363No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGGAGCTGAGTCATGGGGTCTATG9820.6446826808820729No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA9790.642713181856975No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTGCTTCTTGTGGTAACTGGTC9320.6118576971304399No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA9080.5961017049296561No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG9030.5928192065544927No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT8170.5363602345016839No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC7920.5199477426258674No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG7460.489748757574365No Hit
CATAGACCCAAGACCCCAGCCTTTACTACCGTACAAGGGGTAAGGCGTAC7430.48777925854926707No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGCTATACCACACTACA6740.4424807809720134No Hit
CATAGATGGCCAAGATACGAGCACATACACTGCCCTCTCTGCTGTTCCTT6450.42344229039606623No Hit
CATAGAAGCCATGAACACAGGATTGAGGAGCTGAGTCATGGGGTCTATGA6400.4201597920209029No Hit
CATAGACCAGCAGACACTCCCATCATATGGTGGAAGGGTAAGAGAGGGTC6280.412281795920511No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGATCATTGTTCACTGC6210.4076862981952824No Hit
CATAGATCAAGGAAAACACCAGCCCACACTGACGCTATACCACACTACAC6160.40440379982011915No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG5890.38667830859423724No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTATGTGTGCAGAAGTAGGAAGTA5390.3538533248426042No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGGCTCAGGTATGTCTT5300.3479448277673102No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGATCATTGTTCACTGC4910.32234134044103646No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT4830.3170893430407752No Hit
CATAGAAGGACAAAGACATTTAGGACCCACACTGACGACATTGCTTCTTG4070.26719536773829294No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGTCATTGTCGCTGTCCCATCT3990.26194337033803167No Hit
CATAGACGGATTATTCTCTCCATGGTCTACACTGACGCTATACCACACTA3910.2566913729377704No Hit
CATAGATCAAGGAAAACACCAGCCCAAGGGGTAAGGCGTACTGGTCTATG3890.2553783735877051No Hit
CATAGACGTGACTAAAAGCATGTTGGTACACTGACGACATGGTTCTACAA3480.22846188691136599No Hit
CATAGACCCAAGACCCCAGCCTTTACACACTGACGCTATACCACACTACA3440.22583588821123535No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGAATACTGCTGAAGTGATGGGC3380.22189689016103936No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT3280.21533189341071277No Hit
CATAGACGGATTATTCTCTCCATGGTCTATGCAAGGGGTAAGGCGTACTG3240.2127058947105821No Hit
CATAGACCAGCAGACACTCCCATCATACACTGACGCTATACCACACTACA3160.20745389731032082No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG3090.20285839958509222No Hit
CATAGACCCAAGACCCCAGCCTTTACACACTGGCTCAGGTATGTCTTTAT3080.20220189991005957No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGCTATACCACACT2950.19366740413463496No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT2830.18578940803424304No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC2770.18185040998404706No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGGTGGAAGGGTAAGAGAGG2740.17988091095894906No Hit
AAGGATTCTGGGCCATCTATGAGACCAAGTCTCTGCTACCGTATGGTTCG2650.1739724138836551No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGCTCAGGT2630.1726594145335898No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGACGATCATTGTTCACTGC2550.16740741713332852No Hit
CATAGATGTGTAGCCTGGGTCTGACAAATGAGAAACCTGGATGCTTCTAT2540.16675091745829584No Hit
CATAGACATTTAATCCTCACAATGACCCATGACATGGTTCTACAAAGGAT2250.1477124268823487No Hit
CATAGAAGGACAAAGACATTTAGGACCCAAGGGGTAAGGCGTACTGGTCT2220.1457429278572507No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCTACCAGTTATTAGTTGAATGA2180.14311692915712007No Hit
CATAGAGTGCCTGTTTCCTCATTCGTAGAGTGTCTGTTTCCCCACTCAAA2170.1424604294820874No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCTGTCCCAACTGTCTCTGA2160.14180392980705475No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGATGCTGAAGTGATGGGCTAGAT2120.1391779311069241No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCATTGCTTCTTGTGGTAAC2110.13852143143189144No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTACACTGACGATCATTGTTCACT2080.13655193240679345No Hit
CATAGATGAGGACACCATAAAGACAACAAGGGGTAAGGCGTACTGGTCTA2050.13458243338169548No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG2010.13195643468156484No Hit
CATAGACGTGACTAAAAGCATGTTGGTGCATTACAGAGAGGAGATCTATG2000.13129993500653217No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGTCTTTGGAGGAATCTATGAGAC1960.12867393630640153No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTCATTTATTTTAAAGGACT1870.12276543923110758No Hit
CATAGAAATGATGCTGAAGGGCCTGCACTGACGACATGGTTCTACACATA1840.12079594020600959No Hit
CATAGAAATGATGCTGAAGGGCCTGCCACATAGAAATGATGCTGAAGTGA1820.11948294085594427No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGTCTGAATGGTGGAAGGGTAAGA1810.11882644118091162No Hit
CATAGACTCATTGCACTTTCCACAACTGCCCTCTCTGCTGTTCCTTCTAT1720.11291794410561767No Hit
CATAGAAATGATGCTGAAGGGCCTGGATGCTGAAGTGATGGGCTAGATCT1710.112261444430585No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA1690.11094844508051968No Hit
CATAGAGTCTGAATGGTGGGAGAGTGCTGAAGTGATGGGCTAGATCTATG1640.10766594670535638No Hit
CATAGACCTCCGACAGTTTTTGTGCACCTTCATTGTTGCTCTATGAGACC1610.1056964476802584No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT1610.1056964476802584No Hit
CATAGACCAACATTTCTTCTCCCAGGGTATAGACCAACATTGCTTCTTGT1610.1056964476802584No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGATCATTGTTCAC1600.10503994800522573No Hit
CATAGAAAAAACAGTTGGCCAGGCATGTCTTTGGCTCAGGTATGTCTTTA1580.10372694865516041No Hit
CATAGACGTGACTAAAAGCATGTTGGTCATAGAAATGATGCTGAAGTGAT1580.10372694865516041No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCTGAAAAATTTCTATGAGA1570.10307044898012775No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)