FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807919

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807919
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44246
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1310829.625276861185192No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCA471010.645030059214394No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCTCTACT20424.615106450300592No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTTGTATATCT15833.577724540071419No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAAGCCCTTGTGAAGTTCTAT10812.4431587036116262No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAGCCCAGGTCTATGTGTAGA10442.359535325227139No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGGTCAGGAGATTGAGACCATCCTG9902.2374903946119424No Hit
CATAGATTGCATAGCCATGTATAGCCCCTAAGCCCAGGTCTATGTGTAGA9002.0340821769199477No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGTGTAG7931.7922524069972425No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGCTCATTATTATTGGATGGGA5601.265651132305745No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGAAAG4851.096144284229083No Hit
CATAGAATCCTTTCCCCATTGCTTGCTCATTATTATTGGATGGGATCTAT3740.8452741490756227No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGTGCCAC3610.815892962075668No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAGCCCAGGTCTAT2900.6554264792297609No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGAGATTATAGGTACTAATTTT2840.6418659313836279No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGAATTACAGGTGCCCGCCAC2480.56050264430683No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCAACATGGTG2380.5379017312299417No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGTTTTTCTCAGGTTTGTCAAA2340.5288613659991863No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTTAAGGCTGGCAAAGTTCCA2120.47913935723003204No Hit
CATAGATTGAGCTTAAATGATCTGTGCAACCCCTTAAGAAAATTTAATTG2100.4746191746146544No Hit
CATAGATGGAGAGAGTGAGGGAAAGGAACTGGGGACTGTGACTCTGTTTT2080.4700989919992768No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGTGCACC2060.4655788093838991No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGGAAGTACACAAAAAGGGCAT1760.3977760701532342No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCATGATTGT1640.3706549744609682No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTCACCCTGCTTATCAAACAT1470.3322334222302581No Hit
CATAGACTGCCTCAGCCTCCTGAGTAACTGGAACCACAGGCATGTGCCAC1450.32771323961488047No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTTGGAAGTTAGGAAGCCAGC1430.3231930569995028No Hit
CATAGACCTCCTGTTTGACCATTTTGAACATAGCCTTTGGGGTTTCTATG1240.280251322153415No Hit
CATAGAATCCTTTCCCCATTGCTTGTTCATTATTATTGGATGGGATCTAT1170.26443068299959316No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGCCATGCTGAAGTCCCATGAT1170.26443068299959316No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1160.2621705916919044No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCCTGCTAT1140.2576504090765267No Hit
CATAGACCCACTTTCGTGACTTTGTGTAGAACCATGTCGTCAGTGTTGGA1120.253130226461149No Hit
CATAGAGGTGAGCGGCTGTCTCCAAACTGGACAATGAGAGGATCTATGTG1100.24861004384577134No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAGGTTTGTCAAAGATCA1100.24861004384577134No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGGAATTAGACTCTTGACATCTATG1040.2350494959996384No Hit
CATAGAGGTGAGCGGCTGTCTCCAGATGATATGAACCCAAAGGTCTATGT1000.22600913076888307No Hit
CATAGAATCCTTTCCCCATTGCTTGTTGTCTGTGACAGCTTGTATACATC980.2214889481535054No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGCTCTATTGGAAGTTAGGAAGC950.21470867423043893No Hit
CATAGATGGAGAGAGTGAGGGAAAGGAGGCTAAAGTTTATCGAGTTCCTT940.21244858292275007No Hit
CATAGACATGCTAACATTTCTGGGGATACTGGGGACTGTGACTCTGTTTT920.20792840030737242No Hit
CATAGAGGTGAGCGGCTGTCTCCACACTGACGCCATGCTGAAGTCCCATG890.20114812638430593No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTGCAGGCGCATGCTTG890.20114812638430593No Hit
CATAGAAGCAGGATGAAAACATGGTACATTACTGGGGACTGTGACTCTGT820.1853274872304841No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTAATACAAAAAATTAG820.1853274872304841No Hit
CATAGACTGTCATTGCTTGCCCATTGCTCATTATTATTGGATGGGATCTA810.18306739592279528No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGTTTTTCTCAGGTTTGTTGTA760.1717669393843511No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA740.16724675676897346No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA730.16498666546128465No Hit
CATAGACCATCCAGAGGTAATTCTGCTACCGCAGCTTCCACATGATGGAC720.1627265741535958No Hit
CATAGAATCCTTTCCCCATTGCTTGTGACATGGAAGTACACAAAAAGGGC710.16046648284590698No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACGACAGCCCGGCTACTG700.15820639153821814No Hit
CATAGAATAGCCAGCAGAAGGAAGCACACAAAAAGGGCATCTATGTGTAG690.15594630023052933No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCCGCCAC680.1536862089228405No Hit
CATAGATTGCATAGCCATGTGTAGCCATGCTGAAGTCCCATGATCTATGT650.146905934999774No Hit
CATAGAATCCTTTCCCCATTGCTTGTTCTTCTCAGGTTTGTTGTATATCT630.14238575238439632No Hit
CATAGAAGTTCTGATCCACATTCACGTATGGAACTTTGCCCCAAAAGAGG630.14238575238439632No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA630.14238575238439632No Hit
CATAGACCATCCAGAGGTAATTCTGCTCATTATTATTGGATGGGATCTAT630.14238575238439632No Hit
CATAGATGAAAAGTCAAGCCAGCACAAGACTTGGTCTCATAGGAGCAGGA620.1401256610767075No Hit
CATAGATTGCATAGCCATGTGTAGCCCTAAAGCCCTTGTGAAGTTCTATG610.13786556976901868No Hit
CATAGATTGCATAGCCATGTGTAGCCAGATGATATGAACCCAAAGGTCTA600.13560547846132984No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA600.13560547846132984No Hit
CATAGACATGCTAACATTTCTGGGGATATTACTGGGGACTGTGACTCTGT600.13560547846132984No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA600.13560547846132984No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG580.1310852958459522No Hit
CATAGACTGTCATTGCTTGCCCATTGTTTGGAAGTTAGGAAGCCAGCTCT570.12882520453826335No Hit
CATAGATGCATCAGCAACTCACAGATTATAGAGCAGGAATTAGACTCTTG560.1265651132305745No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA550.12430502192288567No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGCTTCCACATGATGGACATCTA550.12430502192288567No Hit
CATAGACATGCTAACATTTCTGGGGATAACATTACTGGGGACTGTGACTC550.12430502192288567No Hit
CATAGATTGAGCTTAAATGATCTGTGCAAGGCTGGCAAAGTTCCAATCTA540.12204493061519686No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA540.12204493061519686No Hit
CATAGACTGTCATTGCTTGCCCATTGTTATTGGAAGTTAGGAAGCCAGCT540.12204493061519686No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACATGCCAC530.11978483930750801No Hit
CATAGAATAGCCAGCAGAAGGAAGCAACCCCTTAAGAAAATTTAATTGTC510.11526465669213035No Hit
CATAGACCCACTTTCGTGACTTTGTGTAGAACCATGTCGTCAGTGTAGAT500.11300456538444154No Hit
CATAGAGTTCAAATGGCCAATCAGGTCTATGTGTAGAACCATGTCGTCAG500.11300456538444154No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAAATTTGTTAAAAGAGG500.11300456538444154No Hit
CATAGACATGCTAACATTACTGGGGACTGTGACTCTGTTTTCTATGTGTA490.1107444740767527No Hit
CATAGATTGAGCTTAAATGATCTGTGCAACCGTACATCACTTATACGCCT470.10622429146137503No Hit
CATAGACATGCTAACATTTCTGGGGATAGACATGCTAACATTACTGGGGA470.10622429146137503No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAAGCCCTTGTGAA450.10170410884599737No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)