FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807934

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807934
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences163079
Sequences flagged as poor quality0
Sequence length150
%GC36

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC95805.874453485733908No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA77544.754750764966673No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA71234.3678217305723No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC62203.8141023675641863No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA45772.806615198768695No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT43932.693786447059401No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA36932.264546630774042No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG31881.9548807633110332No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA31671.9420035688224726No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA31621.93893757013472No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA25921.589413719730928No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG24701.5146033517497655No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT24481.5011129575236541No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTGGGGGAAGAGAAACAGAATC17151.0516375498991288No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA15940.9774403816555166No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC15000.9197996063257685No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC14690.9007904144617026No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA13690.8394704407066513No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA12470.7646600727254889No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA12460.7640468729879384No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG12250.7511696784993775No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG11940.7321604866353117No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT11760.7211228913594026No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC11300.692915703432079No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA10910.6690009136676089No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC10820.6634821160296543No Hit
CATAGAACTTTCAGTAATAGGGGACAAGAACAAGGGCATGGTCAAGTGTC10600.6499917218035431No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT10480.642633324952937No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT10430.6395673262651844No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT10280.6303693302019266No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT9560.5862189490982898No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTTGGTGAAAAGTAGGGGAC9350.573341754609729No Hit
CATAGACCATGTAATACCATCGTGAGCAGGAAAATGTCAGTGGGCCATCT8930.5475873656326075No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA8920.546974165895057No Hit
CATAGATGCACCAGAAGCCACCTACCGTACTGGTGGTGCTGGAACTAGTT8580.5261253748183395No Hit
CATAGACCCACTTACACACACAGGTTTGGGGGAAGAGAAACAGAATCTAT8580.5261253748183395No Hit
CATAGATCATGAATGACTCCCACTCTGCTACCGTACTCCAGTCTCGGCAA8340.5114085811171273No Hit
CATAGATTTGGCACTCACATACACGCTCTCTTCCGCCTTTATCCTTCTAT8060.4942389884657129No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACAGCCCAGTTTTCCTTCTCTAT7520.46112620263798526No Hit
CATAGACCATGTAATACCATCGTGAGCAGATCTATGAGGAAAATGTCAGT7290.4470226086743235No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG7150.43843781234861634No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA7130.4372114128735153No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGAATTAGAGCCAGTTCTGA6930.424947418122505No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA6690.41023062442129277No Hit
CATAGATTTGGCACTCACATACACGCTGACATCCCAACCACACGTCTATG6440.39490063098253No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA6420.39367423150742886No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACATCGGCCGCACTGAAATT6410.3930610317698784No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG6400.39244783203232786No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG6200.3801838372813176No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGGGCAAGTGTATGGTCAGT5980.3666934430552064No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTGGTGAAAAGTAGGGGACAGTTC5850.3587218464670497No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA5800.35565584777929715No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAAGTAGGAAAATGTCAGTGGGCC5720.35075024987889303No Hit
CATAGACCCCCATGCAACCACATCTAGAGACCAGTCACTCAAATATAGAC5700.349523850403792No Hit
CATAGATGCACCAGAAGCCACCTACCAAGTATATGACACATTACACCAGT5640.34584465197848896No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA5570.34155225381563536No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT5490.3366466559152313No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAAGTATATGACACATTACACC5480.33603345617768077No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT5380.32990145880217564No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT5370.3292882590646251No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA5310.32560906063932205No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTTGGGGGAAGAGAAACAGAAT5300.32499586090177157No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTACTCCAGTCTCGGCAACA5230.3207034627389179No Hit
CATAGATCATGAATGACTCCCACTCTGCTACCGTAAGGAATTAGAGCCAG5160.3164110645760644No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA5050.3096658674630087No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCACACTGACGACAAGGTTTTCC4890.29985467166220053No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTACAGGATGACTTATGGAATCT4650.2851378779609882No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT4580.2808454797981347No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC4530.2777794811103821No Hit
CATAGACCCCCATGCAACCACATCTATCCCCTTTACCTACCTTCTCAGCT4500.27593988189773055No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA4450.27287388320997796No Hit
CATAGAAGGGCAATTATCTCATCCTAGACACACTGACGACAATGGGCACA4450.27287388320997796No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACACCCGTAATCCCTCCCTT4440.2722606834724275No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCAAACAGAATGGGACCCATCTAT4440.2722606834724275No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT4380.2685814850471244No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA4350.26674188583447284No Hit
CATAGATGCACCAGAAGCCACCTACCGTATCCATCAGAGCATCACCCCTT4250.26060988845896776No Hit
CATAGACCATGTAATACCATCGTGAGCAGATAGGAATTAGAGCCAGTTCT4030.24711949423285645No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG3970.2434402958075534No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA3950.24221389633245238No Hit
CATAGAGCATCCTCGTAATAGCAAACATTTGGGGGAAGAGAAACAGAATC3930.24098749685735132No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT3860.23669509869449776No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGGAATTAGAGCCAGTTCTG3770.23117630105654313No Hit
CATAGAGCAGTGCAGCAGAAGATAGCCTTCTCTGATACCATCCCTCTATG3750.22994990158144213No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACCGTACACCCGTAATCCCTCCC3730.2287235021063411No Hit
CATAGACCCCCATGCAACCACATCTATGAGGATGACTTATGGAATCTGAA3710.22749710263124007No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTCACCCGTAATCCCTCCCT3660.22443110394348753No Hit
CATAGATCATGAATGACTCCCACTCTGGTGGTGCTGGAACTAGTTCTATG3600.22075190551818447No Hit
CATAGATCATGAATGACTCCCACTCTGCTACCGTATGGTGAAAAGTAGGG3560.2182991065679824No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGCTCTCTTCCGCCTTTATC3550.2176859068304319No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC3510.21523310788022984No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGAAAATGTCAGTGGGCCAT3400.20848791076717418No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA3330.20419551260432062No Hit
CATAGATGCACCAGAAGCCACCTACCGTAGAACAAGGGCATGGTCAAGTG3280.20112951391656805No Hit
CATAGAATCCCTGCCCTTGACCTTGGTCTGTCATAAAACAATGGGCACAC3220.197450315491265No Hit
CATAGATGTGTGAGAGAGGGAGAGACATGTGTACAAACCAAACAATAGCC3140.19254471759086086No Hit
CATAGACAGAACACCACACCCCTGTCCATCAGAGCATCACCCCTTCTATG3140.19254471759086086No Hit
CATAGACCCACTTACACACACAGGTTTGTCCCCCTTCATTTTGCTGGAAC3080.1888655191655578No Hit
CATAGAATCCCTGCCCTTGACCTTGGGCCTACTTTGGGGGAAGAGAAACA3080.1888655191655578No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAGCATGAGAAGAATGGCCTCT3070.18825231942800727No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT2970.18212032205250217No Hit
CATAGAGAAAGGCAGGCGAAGTTAGCGTCCAAGTATATGACACATTACAC2960.18150712231495167No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC2890.17721472415209807No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG2880.17660152441454754No Hit
CATAGATGCACCAGAAGCCACCTACCACACTGACGACAATGGGCACACTT2660.1631111301884363No Hit
CATAGATCTGGGAGGTGAAGAGGACAAGCACATTATTATTGGTTGGTTCT2610.16004513150068372No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCGAACAAGGGCATGG2590.1588187320255827No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGCCCTGTGATTGTCCTGGTCTAT2590.1588187320255827No Hit
CATAGACAGAACACCACACCCCTGTCTTAGGAGTTCTGGCCCCTGTCTAT2580.1582055322880322No Hit
CATAGATGCACCAGAAGCCACCTACCGTAACAAGCACATTATTATTGGTT2570.15759233255048166No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGACACATAGAGGGCAAGTGTAT2500.1532999343876281No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGAACAAGGGCATGGTCAAG2470.15146033517497653No Hit
CATAGATCTGGGAGGTGAAGAGGACAACGCTGACATCCCAACCACACGTC2460.15084713543742603No Hit
CATAGAACTTGTGCTTTTGGTGTCACATAGATCTGGGAGGAACAGGGAGA2440.149620735962325No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT2440.149620735962325No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACCAAGTCTTAGGAGTTC2400.14716793701212294No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGGAACAAGGGCATGGTCA2360.1447151380619209No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGTGGTGCTGGAACTAGTTCTAT2340.14348873858681988No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGAACAGGGAGATGTTCTAT2320.14226233911171887No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA2310.14164913937416834No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAAGGAAAATGTCAGTGGGCC2290.14042273989906734No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGGGGTCCCCTTCATTTTGCTGGA2220.13613034173621374No Hit
CATAGACCATGTAATACCATCGTGAGCAGCACCCCTTCATTTTGCTGGAA2190.1342907425235622No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC2150.13183794357336015No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTATTGTCCTTGCACACCATGG2130.13061154409825912No Hit
CATAGAACTTGTGCTTTTGGTGTCACAATGGGCACACTTAACACCTCTAT2080.12754554541050656No Hit
CATAGAATTCCCCAATGTCCTTGCACACCATGGATCTATGAGACCAAGTC1980.12141354803500144No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTGCTACCGTACCAAGTATATGAC1970.12080034829745094No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACTGCAAACAGAATGG1970.12080034829745094No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACTGGTGGTGCTGGAACTAG1950.11957394882234991No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAATCACTTGATCATCCATTGT1920.11773434960969838No Hit
CATAGACCATGTAATACCATCGTGAGCAGATCTATACAAGCACATTATTA1910.11712114987214785No Hit
CATAGATCATGAATGACTCCCACTCTGGGAGGAACAGGGAGATGTTCTAT1910.11712114987214785No Hit
CATAGAAGGGCAATTATCTCATCCTAGACTCTGGGAGGAACAGGGAGATG1900.11650795013459735No Hit
CATAGATCATGAATGACTCCCACTCTGTTCCCTGGCAAAAGGGTAAGAGT1870.1146683509219458No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATCCTGGCAAAAGGGTAAGAGTT1830.11221555197174377No Hit
CATAGAATTGCCTACTTTGGGACCCATCCCCCTTCATTTTGCTGGAACTC1800.11037595275909223No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACCAAGTCTCCTTAGGAG1800.11037595275909223No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA1760.10792315380889017No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGGATGACTTATGGAATCTG1730.10608355459623864No Hit
CATAGACAGAACACCACACCCCTGTACAAACCAAACAATAGCCAGTCTAT1670.10240435617093556No Hit
CATAGAAAAGTCACCATGCAGCCCTGAGGTTCTTCAACACAGCTATTCTA1660.10179115643338506No Hit
CATAGATGCACCAGAAGCCACCTACCGTATGGGAGGAACAGGGAGATGTT1640.10056475695828403No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTAGAACAAGGGCATGGTCAAGTG1640.10056475695828403No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)