FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807937

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807937
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences106961
Sequences flagged as poor quality0
Sequence length150
%GC34

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA1402513.112255868961583No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT1157610.82263628799282No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT61215.72264657211507No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG52614.918615196193005No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT47144.407213844298389No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA46304.328680547115304No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA45424.246407569113976No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT35393.308682603939754No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA23332.1811688372397415No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG21442.0044689185777993No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA20541.9203261001673508No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA17931.6763119267770497No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGAGAAGTGTATTAATTA16401.5332691354792867No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT14071.3154327278166809No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA12801.1966978618374922No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT10010.9358551247651012No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT9400.8788249922869082No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG8890.8311440618543208No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG8890.8311440618543208No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT7370.6890361907611185No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA7300.6824917493291948No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATATGTAGAACAGAAGTGTAT7160.6694028664653472No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT7070.6609885846243023No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC6630.6198520956236385No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT6020.5628219631454455No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC5210.48709342657604177No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC4480.4188442516431223No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG4200.3926664859154271No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT3830.3580744383466871No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG3670.34311571507371846No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGGTAGCAAAACAGAGTCTATG3510.3281569918007498No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA3330.31132842811866007No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC3030.28328082198184384No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC2850.2664522582997541No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGGCAACATATCAGAAGCATCTA2690.25149353502678545No Hit
CATAGAACCAACCTCTCTATCTCCGTCACTGAGCTGAGGGTCACTTCTAT2630.24588401379942224No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCCTCATAGACCTTTTTCTG2450.22905545011733247No Hit
CATAGAGGTGAGCGGCTGTCTCCATCCAGTCCAGCTCCTTCTATGTGTAG2370.22157608848084814No Hit
CATAGAGTGATCCTCCTTTCTCAGCTTACACTGCACATGGGGTCTATGTG2320.21690148745804544No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATACGGCAACATATCAGAAGC2280.2131618066398033No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA2250.21035704602612165No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTGCTCCTTCTCACACAAATCTA2230.2084872056170006No Hit
CATAGAAGTACCATCAGAGTGAACAGGTCACTGACAGGTCTTAAAGCTCT2230.2084872056170006No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCATGCTAACCTCCCACCCCAGCT2200.20568244500331895No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCCCAGGTAGCAAAACAGAGTCTA2150.20100784398051624No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTTGAAGCAGAGGTAGATGGA2000.18698404091210813No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATAGAAG1990.18604912070754762No Hit
CATAGAGGCACGATCTTGTTTCACTGTACACGGAAGACACAGCACACTCT1930.18043959948018437No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA1810.16922055702545788No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATAGGAGGAGCTGACTTACTG1750.16361103579809463No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTAGTGCGATAGCGAGAAGAGTG1670.1561316741616103No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT1660.15519675395704977No Hit
CATAGATGGGATTATAGGTGTGAGCCATTGCGCCTGGCCAAAAATTTCCA1530.14304279129776273No Hit
CATAGAACCAACCTCTCTATCTCCGTAGGAAACATTGGAAAGATGGGGAT1480.13836819027496003No Hit
CATAGAGGCACGATCTTGTTTCACTGTGGGTGGGAAAGGTATGTGGCACA1440.13462850945671787No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTCTGTTTACTCGGAGATT1410.13182374884303624No Hit
CATAGATCCCATACTCCTCCATTACCCTCTTGCTCCTTCTCACACAAATC1390.12995390843391516No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG1380.12901898822935465No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA1380.12901898822935465No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG1380.12901898822935465No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTACTTTTCTAATCAATAGTA1360.12714914782023354No Hit
CATAGAAGCCTTTTGAGATCTGAGCATTCTCTCAGGGCTGTTCTCTATGT1320.12340946700199137No Hit
CATAGAGTCCTTCCCTCTCACACATGTCACTGACAGGTCTTAAAGCTCTA1320.12340946700199137No Hit
CATAGAGTGATCCTCCTTTCTCAGCCACATAGACCTTTTTCTGTAGTCAA1310.12247454679743083No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA1310.12247454679743083No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGATAGCGAGAAGAGTGGAGGC1290.12060470638830977No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA1260.11779994577462813No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC1250.11686502557006759No Hit
CATAGATGGGATTATAGGTGTGAGCCATCACGCCTGGCCAAAAATTTCCA1230.11499518516094652No Hit
CATAGAAACAGCAAAGCCCTCCACCACACGGAAGACACAGCACACTCTTC1220.11406026495638596No Hit
CATAGATGGGATTATAGGTGTGAGCCATGCTGAAGTCCCATGATCTATGT1220.11406026495638596No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCACGGCAACATATCAGAAGCATC1200.11219042454726488No Hit
CATAGATCCCATACTCCTCCATTACCCTAGCACTATTCTCTGGCCCGTCT1140.10658090331990165No Hit
CATAGATGGGATTATAGGTGTGAGCCACTACGCCTGGCCAAAAATTTCCA1110.10377614270622001No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTATAATGGGAAAGGTATGT1100.10284122250165947No Hit
CATAGAGGCACGATCTTGTTTCACTGTTACGATAGCGAGAAGAGTGGAGG1090.10190630229709895No Hit
CATAGATGGGATTATAGGTGTGAGCCACAGCGCCTGGCCAAAAATTTCCA1080.1009713820925384No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGCATTCTCTCAGGGCTGTTCT1070.10003646188797786No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)