FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807939

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807939
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences255557
Sequences flagged as poor quality0
Sequence length150
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA191547.495001115211088No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT111194.350888451500056No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT91273.571414596352281No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT88313.4555891640612466No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA84163.293198777572127No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG81463.1875472008201693No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA59612.3325520334015506No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG53332.08681429191922No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT49191.9248152075662182No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT39931.5624694295206158No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA37611.471687333941156No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA37161.4540787378158297No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA34921.3664270593253167No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA29841.1676455741771894No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTACTTTTCTAATCAATA29301.146515258826798No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA27881.0909503554979907No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG25290.9896031022433351No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA24090.9426468459091317No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG23140.9054731429778875No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT22030.8620386058687495No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAACAATGCCTCACACACAGGTCT18080.7074742621019968No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA17950.7023873343324581No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT17890.700039521515748No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT17670.691430874521144No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT14850.5810836721357662No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTATAACAATGCCTCACACACAG14590.5709098165966888No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTCTGTTTACTCGGAGATT14390.5630837738743215No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT14040.5493881991101789No Hit
CATAGACCACACACACAACTGAGAGTTACGGCAACATATCAGAAGCATCT13800.5399969478433383No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATTCTGTTTACTCGGAGATTT13790.5396056457072199No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC13640.5337361136654445No Hit
CATAGAACCAACCTCTCTATCTCCGTGATCTACAGTTTCAATACTATGCC13500.5282578837597874No Hit
CATAGATCCCATACTCCTCCATTACCCTAGCACTATTCTCTGGCCCGTCT13460.526692675215314No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT13070.5114318919066979No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGAGGAATCTTTGGGAGGCTATT12890.5043884534565674No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTTACGGAAGACACAGCA12160.4758233975199271No Hit
CATAGACACAGGCCAATCTCAGCAGAAGTGTATTAATTATCTATGGCTGC12070.4723016782948618No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG12070.4723016782948618No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTCACTGAGCTGAGGGTC11130.43551927749973585No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGGCAGAGAGTGTGTTGTATTCT10860.42495411982454007No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGACCTTTTTCTGT10820.42338891128006667No Hit
CATAGATACCTGTCCTCTGCCTCGAGTACGGCAACATATCAGAAGCATCT10640.4163454728299361No Hit
CATAGAGGCACGATCTTGTTTCACTGTACACTGTCTTCAGCTCTTTGAGG10340.4046064087463853No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC10340.4046064087463853No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCACGGCAACATATCAGAAGCATC10330.404215106610267No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA9970.390128229710006No Hit
CATAGAAACAGCAAAGCCCTCCACCAGCACTTACTAACAAAGCGCTTCCT9780.3826934891237571No Hit
CATAGACACAGGCCAATCTCAGCAGACCTTTTTCTGTAGTCAAGTGATCT9750.38151958271540204No Hit
CATAGAAACAGCAAAGCCCTCCACCATAGGGCACTGAGACCACATCTATG9710.3799543741709286No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC9550.37369353999303484No Hit
CATAGAGCAGCATTTCTCTCCAAGGAAACATTGGAAAGATGGGGATCTAT9360.36625879940678596No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC9110.35647624600382694No Hit
CATAGAGGCACAGGGATAATGAGGGAGTACGATAGCGAGAAGAGTGGAGG9020.3529545267787617No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGCTAACCTCCCACCCCAGCTGT8740.34199806696744756No Hit
CATAGATATTCTGCCCCCTCCTCTCCACACGGAAGACACAGCACACTCTT8730.3416067648313292No Hit
CATAGAACCAACCTCTCTATCTCCGTAAGAAGTGTATTAATTATCTATGG8710.3408241605590925No Hit
CATAGATTCAACCAGCCATCCCCAATACACTGTCTTCAGCTCTTTGAGGC8460.33104160715613346No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC8260.3232155644337662No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCGCATTCTCTCAGGGCTGTTC8180.32008514734481935No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTTGCTCCTTCTCACACAAATCT8010.3134330110308072No Hit
CATAGACACACTGACAATTTGCACCTGGGTAGAGAGTTCTGTAGATGTTC7770.3040417597639665No Hit
CATAGAGGCACGATCTTGTTTCACTGTACGGCAACATATCAGAAGCATCT7650.2993461341305462No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAAGTGTATTAATT7620.2981722277221911No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT7360.28799837218311375No Hit
CATAGAGCAGCATTTCTCTCCAAGGAATCTTTGGGAGGCTATTAGTCTAT7220.2825201422774567No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTGAGGAGAATGATAT7200.28173753800522No Hit
CATAGACCACACACACAACTGAGAGGAGAATGATATTGTTGCAGATTTCT7030.2750854016912078No Hit
CATAGAGCCCCCAGAGAAGAATGACCTGCGGTAGCTTACACTGCACATGG6920.2707810781939059No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC6890.26960717178555077No Hit
CATAGAGCCCCCAGAGAAGAATGACCTACGGTAGCTTACACTGCACATGG6680.2613898269270652No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGCATTCTCTCAGGGC6530.25552029488528977No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA6440.25199857566022454No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGGGTAGAGAGTTCTGTAGATG6380.24965076284351437No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC6370.249259460707396No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACGGCAACATATCAGAAGCATCTA6350.2484768564351593No Hit
CATAGATCACCAGATGCCAGTTGTGCTACGGAAGACACAGCACACTCTTC6180.2418247201211471No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT6050.23673779235160844No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA5960.23321607312654322No Hit
CATAGACACACTGACAATTTGCACCTGTACGGCAACATATCAGAAGCATC5690.22265091545134744No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTATGTCTGTTTACTCGG5640.22069440477075564No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGATAGCGAGAAGAGTGGAGGC5550.21717268554569039No Hit
CATAGAGTGCTCTCTTTCCCCACCCTGTACGGCAACATATCAGAAGCATC5150.20152060010095596No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGATGGGTAGAGAGTTCTG4920.19252065097023363No Hit
CATAGAGTCCTTCCCTCTCACACATGTTAGAGTCCATCCAGTCCAGCTCC4780.18704242106457658No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA4770.18665111892845823No Hit
CATAGATCCCATACTCCTCCATTACCCTACGGCAACATATCAGAAGCATC4730.18508591038398478No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGATAGCGAGAAGAGT4660.18234679543115626No Hit
CATAGACACAGGCCAATCTCAGCAGACATATCACAGGGCAGAGAGTGTGT4550.17804247193385428No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCACTGAGCTGAGGGTCACTTCTAT4470.1749120548449074No Hit
CATAGAGGCACGATCTTGTTTCACTGTGATCTACAGTTTCAATACTATGC4410.17256424202819723No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA4400.17217293989207888No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG4330.16943382493925035No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA4240.16591210571418508No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTTGCTCCTTCTCACACA4200.16434689716971165No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTACACTGACGGCAACATATCAG4200.16434689716971165No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGAGAAGTGTATTAATTATCTATGG3920.15339043735839752No Hit
CATAGACCCCCTTGAGTTCACTGGACCAAGAGAAGTGTATTAATTATCTA3910.15299913522227918No Hit
CATAGAAACAGCAAAGCCCTCCACCATGTCGTCAGTGTACGGCAACATAT3900.15260783308616083No Hit
CATAGACCACACACACAACTGAGAGTGCAATATGGGCTGGGTGATCTATG3790.14830350958885885No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT3790.14830350958885885No Hit
CATAGATTCAACCAGCCATCCCCAATCCTGTCCTCTAGCCAAATTCCTTA3780.1479122074527405No Hit
CATAGATACCTGTCCTCTGCCTCGAGGTCACTGACAGGTCTTAAAGCTCT3720.14556439463603033No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG3610.14126007113872835No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATCTGTTTACTCGGAGATTTG3560.13930356045813655No Hit
CATAGACACAGGCCAATCTCAGCAGGGCAGAGAGTGTGTTGTATTCTATG3450.13499923696083457No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGACCTTTTTCTGTAGTCAAGT3370.13186881987188767No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTCCCCAGGTAGCAAAACAGAGTCT3230.12639058996623062No Hit
CATAGATCCCATACTCCTCCATTACCCTCTAGCCAAATTCCTTACCGATC3190.12482538142175718No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG3120.12208626646892866No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT2980.11660803656327161No Hit
CATAGAACCAACCTCTCTATCTCCGTCAGTGTAACTTATCTGGGCACGGT2950.1154341301549165No Hit
CATAGAAGTACCATCAGAGTGAACAGGCCATGCTGAAGTCCCATGATCTA2950.1154341301549165No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCA2870.11230371306596963No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT2830.11073850452149618No Hit
CATAGATCCCATACTCCTCCATTACCCTGGGTAGAGAGTTCTGTAGATGT2790.10917329597702274No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCCATTCTCTCAGGGCTGTTCT2640.10330376393524732No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCCAGGTAGCAAAACAGAGTCTAT2600.10173855539077387No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGGCAACATATCAGAAGCATCT2590.10134725325465552No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTAGGATAATGGCTTCCA2570.10056464898241879No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)