FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807949

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807949
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29818
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG410413.763498557918036No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCTCTATGTGTAGAACCAT25008.384197464618687No Hit
CATAGAGATGTCAAGAGCAATGCCCGGCCACATTATTTTCTATGTGTAGA23627.921389764571734No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCCATCCTACATGTGTCTATGT19736.616808639077068No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCTTGTGAGGGCTGAAGTCTATGTG17355.818633040445369No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACCCCATCCTACATGTGTCTA12864.312831175799853No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGGCACTTGGTCCAGACT11803.9573412033000204No Hit
CATAGACTACCACTACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT10203.4207525655644244No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACATTATTTTCTATGTGTAGA8502.8506271379703536No Hit
CATAGACTACCACCACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT8282.776846200281709No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA6042.0256221074518748No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTACTCCTAT5121.717083640753907No Hit
CATAGAAGCAGCATTGATCATCCTCCACATAGAAGCAGCATTTTAACACA3541.187202360990006No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCAGTACAGGAGCACCCTCTAT3231.0832383124287344No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTGATGGGTTTTTGCCAGA2970.9960426587967No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTGGTTGGGAGTTCGAGAC2720.9122006841505131No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCCGGCCACATTATTTTCTATG2610.8753102153061909No Hit
CATAGACCATCTGCGCATCCTGTCTGCTCTATGTGTAGAACCATGTCGTC2540.8518344624052586No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCACCCAGTACAGGAGCACC2320.7780535247166142No Hit
CATAGAAGCAGCATTGATCATCCTCCAGCAGCATTTTAACACAGCATTGA2150.7210409819572071No Hit
CATAGACCATCTGCGCATCCTGTCTGCTCTTTGACTTATGATGGAGTTCT1980.6640284391978No Hit
CATAGAACATCGCACACACATGGAACCATGGCTTCCCTGCTTGTCTTTCA1920.6439063652827152No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGCCACCCCATCCTACATGTG1890.6338453283251727No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCCCATCCTACATGTGTCTA1890.6338453283251727No Hit
CATAGAAGGTGATAATCATGACAGCCACCCCATCCTACATGTGTCTATGT1630.5466496746931383No Hit
CATAGACTACCACTACCCAGCACAGCATTTTAACACAGCATTGAAGTTCT1420.47622241599034143No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCCATCCTACATGTGTCTATGTG1410.47286873700449394No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGAAGTCCCATGATCTATGTG1370.459454021061104No Hit
CATAGACCATCTGCGCATCCTGTCTGGCTTCCCTGCTTGTCTTTCATCTA1230.41250251525923937No Hit
CATAGAACATCGCACACACATGGAACATCGCTGACTTCTCTTAAACAGTT1210.40579515728754445No Hit
CATAGAGAATACAATGAACTGTGATGGCACTTGGTCTCATAGAGAATACA1120.3756120464149172No Hit
CATAGACCATCCTCCCACCTTGACCTATCCTCCCATCTCAAGTCTCACTC1030.34542893554228987No Hit
CATAGACTACCACTACCCAGCACAGGAGCCACCCCATCCTACATGTGTCT1010.33872157757059496No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGACACTCTTGGTCTTTG970.325306861627205No Hit
CATAGAAGCAGCATTGATCATCCTCCATGTCGTCAGTGTAGGGATAGTTT970.325306861627205No Hit
CATAGAGGTGAGCGGCTGTCTCCACCCAGTACAGGAGCACCCTCTATGTG930.3118921456838151No Hit
CATAGAGAATACAATGAACTGTGATGGCATTTTAACACAGCATTTTAACA910.3051847877121202No Hit
CATAGAGATCAATCCCTGTCTACATAACCACCCCATCCTACATGTGTCTA910.3051847877121202No Hit
CATAGAGATCAATCCCTGTCTACATAACCATGTCGTCAGTGTACTCCTAT880.29512375075457775No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCTAGCCATTTTTGGTTCTATG850.28506271379703535No Hit
CATAGACCGGGGGTAGATAGGTGGTTGGGAGTTCGAGACCAGTCTATGTG830.2783553558253404No Hit
CATAGACCATCCTCCCACCTTGACCTCATCCTCCCATCTCAAGTCTCACT800.268294318867798No Hit
CATAGACTCAAGAAACTTACAATCATGGCATTGCTCTTTGACTTATGATG730.24481856596686563No Hit
CATAGAGGGACGGAGGCAAGAGGATAGTTTGAGGGTAATGCTCTTTGACT710.23811120799517072No Hit
CATAGAGGTAGGCATTTCATCTATATTGCAACTTACGGTAGCATTTTAAC700.23475752900932323No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCACATAGAGGTGTCCTTTCCCCAT700.23475752900932323No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCCAGTACAGGAGCACCCTC680.22805017103762829No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCACTTGGTCCAGACTTTCTATGTG640.21463545509423837No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCCCGGCCACATTATTTTCTATGTG640.21463545509423837No Hit
CATAGACTCAAGAAACTTACAATCATGGCACTCTTGGTCTTTGTGGATCT630.21128177610839088No Hit
CATAGAGGTGAGCGGCTGTCTCCATGATCTATGTGTAGAACCATGTCGTC620.20792809712254345No Hit
CATAGAGTTTTGTTCCCTTGCTGGCAAGAGGCACTTGGTCCAGACTTTCT620.20792809712254345No Hit
CATAGAAGGTGATAATCATGACAGCCAAGGGAACAAAACTCTATGAGACC610.20457441813669597No Hit
CATAGAAGGTGATAATCATGACAGCCAAGGGAACAAAACATGCCTAGCCA590.19786706016500102No Hit
CATAGAGGGACGGAGGCAAGAGGATAGGGACGGAGGCACTTGGTCCAGAC580.19451338117915354No Hit
CATAGAGAATACAATGAACTGTGATGGCAGGCTTGTGAGGGCTGAAGTCT490.16433027030652625No Hit
CATAGAAGCAGCATTGATCATCCTCCACCTTTCCCCATCTCCAACCCTCT460.15426923334898385No Hit
CATAGAGAATACAATGAACTGTGATGGCATTGCTCTTTGACTTATGATGG450.15091555436313636No Hit
CATAGAGGTGAGCGGCTGTCTCCAACCCTCTATGTGTAGAACCATGCCTT430.1442081963914414No Hit
CATAGATTGCACCTAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG410.13750083841974647No Hit
CATAGAGGTGAGCGGCTGTCTCCACCCCATCCTACATGTGTCTATGTGTA410.13750083841974647No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGACACTTGGTCCAGACT390.1307934804480515No Hit
CATAGAGATCAATCCCTGTCTACATAACCACCCAGTACAGGAGCACCCTC380.12743980146220402No Hit
CATAGACTACCACTACCCAGCACAGGAGGCACTTGGTCCAGACTTTCTAT370.12408612247635656No Hit
CATAGACTACCACTACCCAGCACACCCAGTACAGGAGCACCCTCTATGTG360.1207324434905091No Hit
CATAGAGGGACGGAGGCAAGAGGATAGTTTGAGGGTAATGCTCTATGTGT360.1207324434905091No Hit
CATAGACATGAGTGGCCGAACAGACCACTCCTATGTAATGTCTTATTTTG330.11067140653296666No Hit
CATAGACTCAAGAAACTTACAATCATGACACTCTTGGTCTTTGTGGATCT320.10731772754711918No Hit
CATAGACATGAGTGGCCGAACAGACCTACGGTAGCAGAGGCACTTGGTCC310.10396404856127173No Hit
CATAGACTCAAGAAACTTACAATCATGGCACTCTTGCTCTTTGACTTATG300.10061036957542424No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)