FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807953

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807953
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences150565
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA5674437.68737754458208No Hit
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG69324.60399163152127No Hit
CATAGACCAGCTTTGCATGAGTGTGGTTAATGAAGCTCTTCCATGTCCCA59603.9584232723408497No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG53243.5360143459635376No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT41262.7403447016238833No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC38842.579616776807359No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG26361.750738883538671No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG25331.682329890744861No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG14040.932487629927274No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT10770.7153056819313918No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG8740.5804801912795138No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTTACGGTAGCAAAGCT8600.5711818815793843No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT7570.5027728887855744No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTTAATCTATGTGTAGAACCAT7230.4801912795138312No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT6660.44233387573473254No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC6510.4323714010560223No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC6450.4283864111845382No Hit
CATAGATGATGTGAAAAGGACCCATGGAAAGCTGTCTGTGTAGGTGATCT6360.4224089263773121No Hit
CATAGATCCACTGTGCTATCTCTGACAGACACTGGGGGCACAAAGTTCTA5970.3965064922126656No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT5940.3945139972769236No Hit
CATAGAGGCTGGGTGACTTGGTGAATGTGTAGAACCATGTCGTCAGTGTA5790.3845515225982134No Hit
CATAGATTAGGGGTGACGGACTAGCCGACTTGGCCTCAGTTTCCCCTCCT5760.38255902766247135No Hit
CATAGATGACCTGTTAATCTGCCCCCGTCTCATAGATGGCCTGTGTTCTT5610.37259655298376115No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA5590.37126822302659984No Hit
CATAGACCAAACACAGAAGACATGGCACCAGTGTAGCAGACCATCTTCTA5430.36064158336930896No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC5220.34669411881911466No Hit
CATAGACTTACTGCCCTCACTCCGTCTACGGTAGCAAACACTCAAAACAG5130.34071663401188856No Hit
CATAGATGATGTGAAAAGGACCCATGGGATGATGTGGCATGGAGAAGGGT4970.3300899943545977No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAGAGACTTGGCCTCAGTTTCCCCT4970.3300899943545977No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTGACTTGGCCTCAGTTTCC4650.3088367150400159No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAATGTTGGAGAGGCACATCTA4570.3035233952113705No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGGAGAAGGGTCTATGTGTAGA4170.27695679606814333No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG3910.25968850662504567No Hit
CATAGATGGTGGGTTCTGGAGAGAGGGCGAAAGTGATCAGAAGCTCTATG3860.25636768173214225No Hit
CATAGACTTACTGCCCTCACTCAGTCTGCATAGCCACATCTATGTGTAGA3690.2450768770962707No Hit
CATAGACCAGCTTTGCATGAGTGTGGCTTGGTCTCATAGATTTATCCAGC3640.24175605220336732No Hit
CATAGATACGATCATAAGGGTGGGGCTGGGCTCAGTGGCTTATGCCTGTA3540.23511440241756054No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTGTACGGTAGCAAAGC3470.23046524756749576No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGGGGAGACACTGGGGGCACA3380.22448776276026966No Hit
CATAGAGGGGAGACACTGGCTATAAGAATAGAGGGGAGACACTGGGGGCA3320.2205027728887856No Hit
CATAGACTGGCGGTGATTGCTTTCCTGGGCGAGACACTGGGGGCACAAAG3240.21518945306014015No Hit
CATAGATGATGTGAAAAGGACCCATGGCCTGTGTTCTTTGCATGATCTAT3080.20456281340284926No Hit
CATAGAGCCAAAGAGATGCTGAAAGGCCTGTGTTCTTTGCATGATCTATG3010.19991365855278453No Hit
CATAGACCAGCTTTGCATGAGTGTGGAACCACCAGTGTAGCAGACCATCT3010.19991365855278453No Hit
CAGTTTCCCCTCCTTCTATGTGTAGAACCATGTCGTCAGTGTAGATCTCG2960.19659283365988114No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCGGATTCAAGCAATTCTTCTATGT2950.19592866868130043No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAAGCAGATCTGTGTTCTATGTGTA2840.18862285391691297No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGGGGCACAAA2810.18663035898117092No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA2810.18663035898117092No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACTTGGTCTCATAGAGGGGAG2770.18397369906684818No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTATGGTCTGCACACTACAA2730.1813170391525255No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA2630.1746753893667187No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGTGCAGAGCCTTCAGGTCA2500.16604124464516984No Hit
CATAGATGATGTGAAAAGGACCCATGGGCGAAAGTGATCAGAAGCTCTAT2440.1620562547736858No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG2440.1620562547736858No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTCAGTCTGCATAGCCACATCT2390.15873542988078237No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTTAGTGACTTGTGCCTGTAGT2380.15807126490220172No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA2370.15740709992362104No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGCAGAGACTTGGTCTCATAGAG2360.15674293494504035No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTGGCCTCAGTTTCCCCTCCTTCTA2290.1520937800949756No Hit
CATAGACCTGACCTCATGATCTGCCTACCTCCGCCTCCCAAAGTGCTGGG2210.14678046026633015No Hit
CATAGACCTCCTTTCCTCCACGGCAAAGCTGCTATGGGATCTTCTATGTG2210.14678046026633015No Hit
CATAGAGGTGAGCGGCTGTCTCCAGAAGTCCGCGCAGAGCCTTCAGGTCA2080.13814631554478132No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA2070.13748215056620064No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA2060.13681798558761998No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA2040.13548965563045862No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA2040.13548965563045862No Hit
CATAGATGATGTGAAAAGGACCCATGGCCATGCTGAAGTCCCATGATCTA2030.13482549065187793No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTTGGCCTCCCAAAGTGCTGGG2020.13416132567329725No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGAGACACTGGGGGCACAAAG2020.13416132567329725No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1910.12685551090890979No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTGCTATGGGATCTTAT1770.11755720120878027No Hit
CATAGACTTACTGCCCTCACTCCGTCACCCAGGCTGGAGTCCAGTAGCGT1760.11689303623019957No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATGTCACCAGTGTAG1750.1162288712516189No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1700.1129080463587155No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGACTTGGTCTCATAGAGGGG1670.11091555142297346No Hit
CATAGATGACCTGTTAATCTGCCCCCACTCAGTCTGCATAGCCACATCTA1660.1102513864443928No Hit
CATAGATGATGTGAAAAGGACCCATGGCCTCAGTTTCCCCTCCTTCTATG1660.1102513864443928No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA1510.1002889117656826No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)