FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807956

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807956
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences217775
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG6904731.70565951096315No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG109165.012512914705545No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG78713.614280794397888No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA63152.8997818849730224No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC58042.665136034898404No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG49672.2807943978877283No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA49042.25186545746757No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA48412.2229365170474114No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC45042.0681896452760875No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT40071.8399724486281712No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG26861.2333830788658018No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG18320.8412352198369878No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCAGATTTGGACCTGCGAGCGGGTTC16570.7608770520032143No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC16390.7526116404545976No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAAGTTTTTCCAAATATAA15620.7172540466077374No Hit
CATAGAGAGGTCGCCCAGGTATTTCTACACTGACGACATGGTTCTACACA13070.6001607163356676No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA12610.5790379979336471No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTTCTTATAGCCAGTGTCTCC12570.5772012398117323No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA12100.5556193318792331No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT11120.5106187578923201No Hit
CATAGAAGATGGTCTGCTACACTGGTTATATGCCATGTCTTCTGTGTTTG11110.5101595683618413No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA10190.4679141315578005No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT10030.46056709907014115No Hit
CATAGATTAAATGCTGCTATGAGAGAGGTACACTGACGACATGGTTCTAC9470.4348524853633337No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTATCTTAGGTAGAGGAGTT8830.4054643554126966No Hit
CATAGATGTGCCTCTCCAACATTCATTTCCCCTCTCTCTGAATAACTCTA8760.4022500286993457No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTTCT8550.3926070485592928No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCATGGTTCTACACATAGAGCCATGG8010.3678108139134428No Hit
CATAGAGAGGTCGCCCAGGTATTTCTTAGGTAGAGGAGTTTCAAACATCT7940.36459648720009186No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGAGGGAA7380.33888187349328436No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTTCTTATAGCCAGTGTCT7330.3365859258408908No Hit
CATAGAAGGAGGGGAAACTGAGACCAAGTCTCTGCTACCGTAAGCTGAAT7300.3352083572494547No Hit
CATAGAACACAGATCTGCTTGGAGGGAAGGAAGGGCAAACTCTATGAGAC7270.3338307886580186No Hit
CATAGATGTGGCTATGCAGACTGAGTGAGGGCAGTAAGTCTATGAGACCA6950.3191367236827No Hit
CATAGAAGATCCCATAGCAGCTTTGCCATGTCTTCTGTGTTTGGTCTATG6520.29939157387211573No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCCACACTCATGCAAAGCTGGT6300.2892894042015842No Hit
CATAGACCCTTCTCCATGCCACATCAGGGATTATCAGTAGTGCTCACATC6190.28423831936631844No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCATGTCTTCTGTGTTTGGTCTATG6150.28240156124440363No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGAAAGGAGGTCTATGAG6030.27689128687865916No Hit
CATAGATCATGCAAAGAACACAGGCCAGTCTATGAGACCAAGTCTCTGCT5950.2732177706348295No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCTTCTTATAGCCAGTGTCTCCC5890.2704626334519573No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGAGCATGTTGAGATGAATAATTG5630.25852370565951094No Hit
CATAGATGTGCCTCTCCAACATTCATGCAAAGCATGTTGAGATGAATAAT5540.25439099988520264No Hit
CATAGACCCTTCTCCATGCCACACTCATGCAAAGCTGGTCTATGAGACCA5490.2520950522328091No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCAGCATGTTGAGATGAATAAT5230.24015612444036274No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGCTAGTC5230.24015612444036274No Hit
CATAGACCCTTCTCCATGCCACATCATCCCATGGGTCCTTTTCACATCAT5220.23969693490988406No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGAGGGATTATCAGTAGTGCTCAC4840.22224773275169324No Hit
CATAGATCACCTACACAGACAGCTTTCCACACTGGAGACAGCCGCTCACC4800.22041097462977846No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG4760.21857421650786363No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTT4470.20525772012398116No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATTCTTATAGCCAGTGT4350.1997474457582367No Hit
CATAGAACACAGATCTGCTTGGAGGTGGGAGCATCTGTGGGAAGGTTCAG4300.19745149810584317No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGAACCTCTCCAGCCTAAAGACACA4300.19745149810584317No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGAGGGAAGGAAGGGCAAACTCT4270.19607392951440705No Hit
CATAGAGCTTCTGATCACTTTCGCCCTCTCTCCAGAACCCACCATCTATG4010.18413500172196073No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGGGAGGGAAGGAAGGGC3820.17541040064286534No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGGAGGGAAGGAAGGGCA3780.17357364252095053No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGGAAGGAAGGGCAAACTCTATGA3740.1717368843990357No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCAGTGAGCTGAGA3560.16347147285041902No Hit
CATAGAAGATGGTCTGCTACACTGGTTCCACACTCATGCAAAGCTGGTCT3520.1616347147285042No Hit
CATAGAACCAGAGTAATGAGGGATGCTCCTCTATGAGACCAAGTAGCATG3320.15245092411893008No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG3250.14923659740557915No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCTTCCCTAAGTACCAGGATTA3250.14923659740557915No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTTCTTA2970.1363792905521754No Hit
CATAGATCATGGGACTTCAGCATGGCCCTCTATGTGTAAAACCACCACAC2910.13362415336930317No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGCGCGGTGGCTCATGCCTGTAAT2760.1267363104121226No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAATGGCATTAAATGACTTGCCCAA2720.12489955229020779No Hit
CATAGATTAAGTGCAGCTATATTGGAGGAAAAGTCTATGAGACCAAGTCT2690.12352198369877167No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG2690.12352198369877167No Hit
CATAGATGTGCCTCTCCAACATTCACCAAGTCACCCAGCCTCTATGAGAC2640.12122603604637813No Hit
CATAGACCCTTCTCCATGCCACATCATTTCCCCTCTCTCTGAATAACTCT2550.11709333027206979No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG2420.11112386637584662No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG2360.10836872919297438No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGGAACAGACATGGGCTAGTCCGT2190.10056250717483642No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)