FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807961

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807961
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23060
Sequences flagged as poor quality0
Sequence length150
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA397317.22896790980052No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA15556.7432784041630525No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG12505.420641803989593No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG9544.137033824804857No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC8253.5776235906331313No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG8243.573287077189939No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG7993.4648742411101474No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG5182.2463139635732867No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT4251.8430182133564614No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG3811.6522116218560277No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA3531.530789245446661No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA3501.5177797051170858No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT3391.4700780572419774No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT3371.461405030355594No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGGTGCGATGGCTTTCTGACT2401.0407632263660018No Hit
CATAGAAGTATTCACACTGGGGCCCAGCCACGGTCAGTTCCCACAGCCAC2240.971379011274935No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT2200.9540329575021683No Hit
CATAGACCCCATGACTCAGCTCCTCATTCTAAAAAAGAACGATGAAATAC2120.9193408499566349No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT2110.9150043365134432No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC1960.849956634865568No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT1860.8065915004336514No Hit
CATAGATGGGACAGCGACAATGACAGCAGCAGCTCTGTCTTGCAGCAACT1680.7285342584562012No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT1640.7111882046834346No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT1590.6895056374674762No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCTAGGATTTGAGCTCATG1470.6374674761491761No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGAGGAAATGATTTCCCTTGAA1390.6027753686036427No Hit
CATAGACCCCATGACTCAGCTCCTCACTCTCCCACCATTCAGACTCTATG1390.6027753686036427No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT1360.5897658282740676No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT1260.546400693842151No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG1200.5203816131830009No Hit
CATAGACCCTCTCTTACCCTTCCACCCTGGGAGAAGAAATGTTGGTCTAT1160.5030355594102341No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG1030.4466608846487424No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA950.411968777103209No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT870.37727666955767564No Hit
CATAGATGGCCCAGAATCCTTTGTAGAACCATGTCGTCAGGCCATGCTGA870.37727666955767564No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG830.3599306157849089No Hit
CATAGATGGCAAATGGTGGGATCTCTGGTGCTGGAATAGTTGGACTCTAT820.3555941023417173No Hit
CATAGATGGCCCAGAATCCTTTGTAGAACCATGTCGTCAGTGTAGATCTC770.3339115351257589No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG700.3035559410234172No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACCCTGGGAGAAGAAATGTTGG680.2948829141370338No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG660.2862098872506505No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC590.25585429314830876No Hit
CATAGAACACCTGAACTACATAGCGGATACACATAGATGATGGGAGTGTC590.25585429314830876No Hit
CATAGAACATTGATTCCTGGCATGTCCCCATTGTAGATTTCTTTCACCTC580.2515177797051171No Hit
CATAGACCAGTACGCCTTACCCCTTGTAGATGGGTCCTAAATGTCTTTGT570.2471812662619254No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTACCAACATGCTTTTAG560.24284475281873374No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG560.24284475281873374No Hit
CATAGAAGTCTCGCTCTGTCATGCAACAACAACAAAACTCGTGACTTCTA530.22983521248915872No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTAGCCATGCTGAAGTC520.22549869904596706No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAATGCTATGAAATAGCTTCAGAT520.22549869904596706No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGCCATGCTGAAGTCCCA490.212489158716392No Hit
CATAGACCAGTACGCCTTACCCCTTGACACTGACGAATGAGGAAACAGGC470.20381613183000866No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTTTCTACGTGATCTATGTGTAGAAC470.20381613183000866No Hit
CATAGAACATTGATTCCTGGCATGTCCCATGATTTACCATCACAAATTTT460.199479618386817No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGAAGAAATGTTATGATGGGAG450.19514310494362533No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCCTGGCCAACTGTTTTTTCTATGT440.19080659150043364No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGGTGGGTTGAGGGAGT440.19080659150043364No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACCCTGGGAGAAGAAAT430.18647007805724197No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCAACATGCTTTTAGTCAC430.18647007805724197No Hit
CATAGAGCAGCTTGAATTCTCCTCAGAAAATGGGATTTTCTTTTCTATTG430.18647007805724197No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG410.17779705117085864No Hit
CATAGATGGCCCAGAATCCTTTGTAGATGGTGCTGGAATAGTTGGACTCT410.17779705117085864No Hit
CATAGAGGTGAGCGGCTGTCTCCACACTGACGAATGAGGAAACAGGCACT400.17346053772766695No Hit
CATAGATTCAGTTTACTTAGAGGCAGACACTTAGCCTGAGATCACACCAC400.17346053772766695No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCACAGAGCCTTCAGGTCA400.17346053772766695No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA400.17346053772766695No Hit
CATAGATCTAGCCCATCACTTCAGCACACTGACGAATGAGGAAACAGGCA400.17346053772766695No Hit
CATAGAAGTCTCGCTCTGTCATGCAATGGTGTGATCTTGGCTCACTGAGA390.1691240242844753No Hit
CATAGAAGCATCCAGGTTTCTCATTTGTAAAGGCTGGGGTCTTGGGTCTA380.1647875108412836No Hit
CATAGATGCCACCACACCCAGTTAATACACTGATGAGCATGCCTTTGATA370.16045099739809193No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGTAGGTAGCAGGCCCTTCAGCATCA370.16045099739809193No Hit
CATAGACCAGTTACCACAAGAAGCAATGATGGGAGTGTCTGCTGGTCTAT370.16045099739809193No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTATGTGCTCGTATCTTGGCCAT350.1517779705117086No Hit
CATAGATGGCCCAGAATCCTTTGTAGAACCATGTCGTCAGTGTCAATCCT330.14310494362532525No Hit
CATAGATGGTATTTGAGTGGGGAAACAGATCCAAACCATATCATACCCCA320.13876843018213356No Hit
CATAGACCCTCTCTTACCCTTCCACCTTCTGTCATGAAATGATGCAGCAA300.13009540329575023No Hit
CATAGATGCCACCACACCCAGTTAATACGGTGGGTTGAGGGAGTCTTCTC290.12575888985255854No Hit
CATAGATCTAGCCCATCACTTCAGCATGGGTCATTGTGAGGATTAAATGT280.12142237640936687No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGAAACCTGGCCATGCTGA270.11708586296617518No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA270.11708586296617518No Hit
CATAGATGACATGGGAAATTATGCTGCTCTATGGTCTGAGAAAAGATGCA270.11708586296617518No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA260.11274934952298353No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCCTGGGAGAAGAAATGTT250.10841283607979184No Hit
CATAGAGCAGCTTGAATTCTCCTCAGACCATGGAGAGAATAATCCGTCTA250.10841283607979184No Hit
CATAGAGCAACCCCAGCAGTTTGAGACCATGGAGAGAATAATCCGTCTAT240.10407632263660017No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG240.10407632263660017No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)