FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807964

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807964
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences90043
Sequences flagged as poor quality0
Sequence length150
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA59996.662372422065014No Hit
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC58746.523549859511567No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA54766.081538820341392No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC41944.657774618793243No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT31333.479448707839588No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA28393.152938040713881No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT21682.4077385249269794No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG20052.2267139033572847No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA17681.9635063247559499No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG17081.8968714947302956No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT15801.754717190675566No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA14781.6414379796319538No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA14151.5714714081050165No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC13951.549259798096465No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA12611.4004420110391702No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG10931.2138644869673378No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA10921.2127539064669104No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC10701.1883211354575036No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC10371.1516719789433936No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG9561.0617149584087602No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT7580.8418200193241008No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA7460.8284930533189698No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT7440.8262718923181147No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT7150.7940650578057151No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG6780.7529735792898948No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC6380.7085503592727919No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA6220.6907810712659507No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGGTGAAAAGTAGGGGACAGTT5960.6619059782548338No Hit
CATAGAACTTGTGCTTTTGGTGTCACAATGGGCACACTTAACACCTCTAT5660.6285885632420065No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCCCCTTTACCTACCTTCTCAGCTC5230.580833601723621No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA5030.5586219917150694No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT4970.5519585087125041No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA4730.5253045767022423No Hit
CATAGATGCACCAGAAGCCACCTACCAAGTATATGACACATTACACCAGT4670.5186410936996768No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG4550.505314127694546No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA4350.48310251768599444No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA4330.4808813566851393No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT4120.45755916617616027No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT3900.43312639516675366No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTACAATGGGCACACTTAAC3870.429794653665471No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA3790.4209100096620504No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC3530.39203491665093343No Hit
CATAGATGTGTGAGAGAGGGAGAGACAATGGGCACACTTAACACCTCTAT3460.38426085314794045No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTGGGGGAAGAGAAACAGAATC3450.38315027264751284No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA3370.37426562864409224No Hit
CATAGACAGTCCTGCCGTGTACATGTAGTGTGCCCTGTGATTGTCCTGGT3350.3720444676432371No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA3340.37093388714280956No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT3270.3631598236398165No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTGAACAAGGGCATGGTCAAGTGT3180.35316459913596837No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT3150.34983285763468563No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA2970.3298424086269893No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGATGACTTATGGAATCTGA2860.317626023122286No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT2830.31429428162100326No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT2810.31207312062014814No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA2720.3020778961163No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG2710.3009673156158724No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGAGGAATTAGAGCCAGTTCTG2700.29985673511544486No Hit
CATAGAACCCTGCTTCCTAAATCAACAAGCACATTATTATTGGTTGGTTC2690.29874615461501725No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACAATGGGCACACTTAACAC2640.2931932521128794No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC2530.28097686660817606No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA2490.2765345446064658No Hit
CATAGACCCCCATGCAACCACATCTATGAGACAATGGGCACACTTAACAC2460.2732028031051831No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2420.2687604811034728No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT2410.2676499006030452No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA2340.2598758371000522No Hit
CATAGAGTCATTCCAAACTGTGCACTTTGCCAAGATTGTAGGAGTAGATC2340.2598758371000522No Hit
CATAGACCATGTAATACCATCGTGAGCAGCACCCCTTCATTTTGCTGGAA2300.2554335150983419No Hit
CATAGAACTTTCAGTAATAGGGGACAAGAACAAGGGCATGGTCAAGTGTC2290.25432293459791433No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGAACAAGGGCATGGTCAAG2260.25099119309663165No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT2230.2476594515953489No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA2180.242106549093211No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAAAGGTTTTCCGGCTTGAGG2160.23988538809235588No Hit
CATAGACAGTATGGGGGAAACGGCTCGAAGGGCAAGTGTATGGTCAGTTC2090.23211132458936284No Hit
CATAGAATTGCCTACTTTGGGACCCAGAGCCTTCTCTGATACCATCCCTC2070.22989016358850772No Hit
CATAGATCTGGGAGGTGAAGAGGACACTGGGAGGAACAGGGAGATGTTCT2050.22766900258765257No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA2020.22433726108636987No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTTCAACAC2010.22322668058594228No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGGATGACTTATGGAATCTGAAG1990.22100551958508713No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC1900.21101029508123897No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG1890.2098997145808114No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAACACTGACGACAAGGTTTTC1770.1965727485756805No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGGAACAAGGGCATGGTCAAG1710.18990926557311505No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA1690.18768810457225993No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGCATCCATCAGAGCATCACC1670.18546694357140478No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGAGGAAAATGTCAGTGGGCCATC1660.1843563630709772No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT1580.1754717190675566No Hit
CATAGATCTGCTCACCTAAATTTCGTTCAGTGTAAGGTTTTCCGGCTTGA1570.17436113856712904No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACCAAGTCTCTTAGGAGT1560.17325055806670145No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTCTCTTCCGCCTTTATCCTTCTAT1540.17102939706584633No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA1520.16880823606499118No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA1500.16658707506413603No Hit
CATAGATTTGGCACTCACATACACGCTGACATCCCAACCACACGTCTATG1480.16436591406328088No Hit
CATAGAATCCCTGCCCTTGACCTTGGACAATGGGCACACTTAACACCTCT1430.158813011561143No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTGTGATTGTCCTGGTCTATGA1370.15214952855857755No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACAGCCCAGTTTTCCTTCTCTAT1280.1421543040547294No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT1230.13660140155259154No Hit
CATAGATGTCCCCATTCATCCTGCAACAGGGCAAGTGTATGGTCAGTTCT1190.13215907955088124No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC1170.1299379185500261No Hit
CATAGATGCACCAGAAGCCACCTACCGTAAGCCTTCTCTGATACCATCCC1130.12549559654831582No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTAGAACAAGGGCATGGTCAAGTG1110.12327443554746066No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTATGAGAC1060.11772153304532279No Hit
CATAGATTTGGCACTCACATACACGCCACATAGAATCACTTGATCATCCA1030.11438979154404007No Hit
CATAGAATTGCCTACTTTGGGACCCATCGGCCGCACTGAAATTGTCTATG950.10550514754061949No Hit
CATAGAGCACCCAACTATCCTTCAGCACACTGACGACATGGTTCTACACA930.10328398653976434No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCGTGTACAGCCTACATCCCTCATC920.10217340603933676No Hit
CATAGATCATGAATGACTCCCACTCTGTTCCCTGGCAAAAGGGTAAGAGT910.10106282553890918No Hit
CATAGACAGTCCTGCCGTGTACATGTGTACAGCCTACATCCCTCATCTAT910.10106282553890918No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)