FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807965

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807965
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences90043
Sequences flagged as poor quality0
Sequence length150
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG59886.65015603656031No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT59826.643492553557745No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT54946.101529269349089No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG39414.376797752185067No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT31013.443910131825905No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT28053.1151783036993437No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT21512.3888586564197105No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG20202.2433726108636987No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT17491.9424052952478261No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT17281.919083104738847No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG17081.8968714947302956No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT14501.6103417256199817No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT14041.5592550226003132No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG13951.549259798096465No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT12471.3848938840331841No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG10821.2016481014626346No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT10801.1994269404617794No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC10591.1761047499528003No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG9371.0406139289006364No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT7530.8362671168219628No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT7300.8107237653121286No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT7170.7962862188065701No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT7070.7851804138022944No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG6660.7396466132847639No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGGTCAAGGGCAGGGATTCTATG6650.7385360327843364No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT6210.6896704907655231No Hit
CATAGAACTGTCCCCTACTTTTCACCATAGAACTTTCCCACCGCCCTTTT6020.6685694612573992No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA5740.6374732072454272No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTGACACCAAAAGCACAAGTTCTAT5640.6263674022411515No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGACACTTGAAAGCTCCCTGGATC5130.5697277967193451No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC5040.5597325722154971No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC4800.5330786402052353No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTAGGTGGCTTCTGGTGCAT4700.5219728352009596No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG4530.5030929666936907No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA4480.4975400641915529No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT4410.48976600068855985No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA4150.460890907677443No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT4110.45644858567573277No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT3880.4309052341658985No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTACACTGCTCACGATGGTATTACA3790.4209100096620504No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT3720.41313594615905735No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC3580.3975878191530713No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGCAGCAAACAATTTCAGAAAGTC3450.38315027264751284No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC3350.3720444676432371No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCTCTCCCTCTCTCACACATCTAT3340.37093388714280956No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGACACTTGAAAGCTCCCT3320.3687127261419544No Hit
CATAGACCAGGACAATCACAGGGCACACTACATGTACACGGCAGGACTGT3290.3653809846406717No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGCCAGGCTAGGCCTCCAAGGCT3240.3598280821385338No Hit
CATAGACACTTGACCATGCCCTTGTTCAGACACTTGAAAGCTCCCTGGAT3180.35316459913596837No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT3080.34205879413169266No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA2940.32651066712570664No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTCTGCTTTTACAAACTCAAGT2860.317626023122286No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT2810.31207312062014814No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT2810.31207312062014814No Hit
CATAGACTCAGAACTGGCTCTAATTCCTCATAGAACTTTCCCACCGCCCT2750.3054096376175827No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA2710.3009673156158724No Hit
CATAGAACCAACCAATAATAATGTGCTTGTTGATTTAGGAAGCAGGGTTC2660.29541441311373456No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG2640.2931932521128794No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTACGGTTGCAGGATGAATGGGGAC2560.2843086081094588No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC2500.2776451251068934No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT2500.2776451251068934No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCTCATAGATGTGGTTGCATGGGG2410.2676499006030452No Hit
CATAGATCTACTCCTACAATCTTGGCAAAGTGCACAGTTTGGAATGACTC2360.26209699810090736No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG2270.25210177359705915No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC2260.25099119309663165No Hit
CATAGACACTTGACCATGCCCTTGTTCTACGGTTGCAGGATGAATGGGGA2250.24988061259620403No Hit
CATAGACACTTGACCATGCCCTTGTTCTTGTCCCCTATTACTGAAAGTTC2220.24654887109492132No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG2180.242106549093211No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2160.23988538809235588No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG2140.23766422709150076No Hit
CATAGAACTGACCATACACTTGCCCTTCGAGCCGTTTCCCCCATACTGTC2130.23655364659107314No Hit
CATAGAACCTCAAGCCGGAAAACCTTTACGGTTGCAGGATGAATGGGGAC2120.23544306609064558No Hit
CATAGAACATCTCCCTGTTCCTCCCAGTGTCCTCTTCACCTCCCAGATCT2050.22766900258765257No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC2010.22322668058594228No Hit
CATAGAGGGATGGTATCAGAGAAGGCTCTGGGTCCCAAAGTAGGCAATTC2000.2221161000855147No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGCCGGAAAACCTGTGTGTGTA2000.2221161000855147No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTGGATCTCAGAGTTAGCTTGC1980.21989493908465954No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC1820.20212565107781835No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC1820.20212565107781835No Hit
CATAGACACTTGACCATGCCCTTGTTCCATAGACACTTGAAAGCTCCCTG1710.18990926557311505No Hit
CATAGAAGGGGTGATGCTCTGATGGATGCTCTGCTTTTACAAACTCAAGT1690.18768810457225993No Hit
CATAGAACCTCAAGCCGGAAAACCTTGTCGTCAGTGTTGCCAAGTAAGTC1680.18657752407183234No Hit
CATAGATGGCCCACTGACATTTTCCTCAGGAGTTGACAAACGACAGCTTC1670.18546694357140478No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT1660.1843563630709772No Hit
CATAGAACCTCAAGCCGGAAAACCTTACACTGAACGAAATTTAGGTGAGC1600.17769288006841177No Hit
CATAGACAGGGGCCAGAACTCCTAAGAGACTTGGTCTCATAGACAGGGGT1540.17102939706584633No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCAGCTCCTCTTCTCTTCCCTCTAT1540.17102939706584633No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT1520.16880823606499118No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT1510.1676976555645636No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT1500.16658707506413603No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTATGTGAGTGCCAAATCTATG1440.15992359206157059No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCCAAGGTCAAGGGCAGGGATTCT1420.15770243106071544No Hit
CATAGACCAGGACAATCACAGGGCAGGGCTGCATGGTGACTTTTCTATGT1320.1465966260564397No Hit
CATAGAGAAGGAAAACTGGGCTGTGGATCTCAGAGTTAGCTTGCCTCTAT1260.13993314305387428No Hit
CATAGAACTGACCATACACTTGCCCTGTTGCAGGATGAATGGGGACATCT1160.12882733804959853No Hit
CATAGAGGGATGGTATCAGAGAAGGCTTACGGTAGGTGGCTTCTGGTGCA1140.12660617704874338No Hit
CATAGACACTTGACCATGCCCTTGTTCTAGACACTTGAAAGCTCCCTGGA1140.12660617704874338No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG1120.12438501604788822No Hit
CATAGAACCTCAAGCCGGAAAACCTGTGTGTGTAAGTGGGTCTATGTGTA1070.11883211354575038No Hit
CATAGAGCAGACAATGGATGATCAAGTGATTCTATGTGGCGTGTATGTGA1020.1132792110436125No Hit
CATAGAAGGGGTGATGCTCTGATGGATAGTTGGGTGCTCTATGTGTAGAA940.1043945670401919No Hit
CATAGAGAAGGAAAACTGGGCTGTGGCAGTGGGGTCCATGCCTGTTCGCA930.10328398653976434No Hit
CATAGATGAGGGATGTAGGCTGTACACATGTACACGGCAGGACTGTCTAT930.10328398653976434No Hit
CATAGACAATTTCAGTGCGGCCGATGGGTCCCAAAGTAGGCAATTCTATG920.10217340603933676No Hit
CATAGAACTCTTACCCTTTTGCCAGGGAACAGAGTGGGAGTCATTCATGA920.10217340603933676No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)