FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807967

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807967
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences110203
Sequences flagged as poor quality0
Sequence length150
%GC41

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2492122.613721949493208No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT51504.673194014681996No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT33823.0688819723600993No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG28172.5561917552153752No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA24712.2422257107338273No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA24672.2385960454797056No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA23122.0979465168824802No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT19081.7313503262161647No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG17851.6197381196519152No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT16951.5380706514341713No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA14771.340253895084526No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA14361.303049826229776No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA14281.295790495721532No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG13201.1977895338602396No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG13191.1968821175467093No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT11821.072566082593033No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA9720.8820086567516311No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT9480.8602306652268995No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA9410.853878751032186No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT8450.7667667849332596No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG8140.7386368792138145No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA7350.6669509904449062No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTAGGATAATGGCTTCCA6570.5961725179895284No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA5880.533560792355925No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTTGCTCCTTCTCACACA5710.5181347150259068No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC5530.501801221382358No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT4960.4500784915111204No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTTACGGCAACATATCAGAAGCA4820.4373746631216936No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT4380.3974483453263523No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTACGGTAGCAGAGACCTTTTTC4290.38928159850457794No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT4210.38202226799633404No Hit
CATAGATCACCAGATGCCAGTTGTGCGTGTGCAGGGCAGAGAGTGTGTTG4130.37476293748809014No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC4020.3647813580392548No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGATAGCGAGAAGAGTGGAGGC3860.3502626970227671No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTTCTGTTTACTCGGAG3780.34300336651452323No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA3700.33574403600627933No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC3570.323947623930383No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT3470.31487346079507816No Hit
CATAGAAACAGCAAAGCCCTCCACCAACAATGCCTCACACACAGGTCTAT3430.3112437955409562No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATAGGAGGAGCTGACTTACTG3330.30216963240565137No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC3280.297632550837999No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC3260.295817718210938No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT3130.2840213061350417No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTATGTGTAGAACAGGAA3110.2822064735079807No Hit
CATAGACCACACACACAACTGAGAGTTACGGTAGCAGAGACCTTTTTCTG3070.2785768082538588No Hit
CATAGAGGCACGATCTTGTTTCACTGTCTTCAGCTCTTTGAGGCATCTAT3020.27403972668620635No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCCCCAGGTAGCAAAACAGA2930.265872979864432No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAACAATGCCTCACACACAGGTCT2920.2649655635509015No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGGCAACATATCAGAA2880.26133589829677956No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA2820.25589140041559666No Hit
CATAGATCACCAGATGCCAGTTGTGCCACAGACCTTTTTCTGTAGTCAAG2820.25589140041559666No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCATGTCGTCA2800.2540765677885357No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG2800.2540765677885357No Hit
CATAGAGCAGCATTTCTCTCCAAGGAAACATTGGAAAGATGGGGATCTAT2690.24409498833970036No Hit
CATAGACACAGGCCAATCTCAGCAGAGGAGAATGATATTGTTGCAGATTT2640.23955790677204794No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGTGTAGAAAGGAATCTTTGG2630.23865049045851747No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATAGAAGTGTATTAATTATCT2620.23774307414498697No Hit
CATAGATCCCATACTCCTCCATTACCCTCACTGAGCTGAGGGTCACTTCT2590.23502082520439552No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGATAGCGAGAAGAGTGGAGGCT2590.23502082520439552No Hit
CATAGAGCCCCCAGAGAAGAATGACCGAGCCCCCAGGTAGCAAAACAGAG2580.23411340889086504No Hit
CATAGAAACAGCAAAGCCCTCCACCATACGGCAACATATCAGAAGCATCT2560.2322985762638041No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC2510.22776149469615165No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGGTAGCAGACCTTTTTCTGTA2470.22413182944202972No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC2420.21959474787437727No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGAGGAGAATGATATTGTTG2400.21777991524731632No Hit
CATAGAAACAGCAAAGCCCTCCACCACCTGAGGAGAATGATATTGTTGCA2360.2141502499931944No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCGGTAAGGAATCTTTGGGAGGCTA2340.2123354173661334No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGAAGTGTATTAATTATCTAT2230.20235383791729808No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA2230.20235383791729808No Hit
CATAGACCAAGAGTTGACAAGGATCTGGAGGAGAATGATATTGTTGCAGA2100.19055742584140178No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA2030.18420551164668839No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGATAATGGCTTCCA2010.1823906790196274No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT1890.17150168325726162No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG1890.17150168325726162No Hit
CATAGAAACAGCAAAGCCCTCCACCATCCTCTAGGTGATGTCTGATCACC1840.1669646016896092No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCA1830.1660571853760787No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGGAGCTGACTTACTGTTCTAT1800.16333493643548724No Hit
CATAGACACAGGCCAATCTCAGCAGAAGAGGCCCCTGTAATGGCCGATAT1800.16333493643548724No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT1790.16242752012195677No Hit
CATAGAGTGATCCTCCTTTCTCAGCCGTACGATAGCGAGAAGAGTGGAGG1770.16061268749489577No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGATGGGAAAGGTATGTGG1740.15789043855430435No Hit
CATAGATATTCTGCCCCCTCCTCTCCTCTAGCCAAATTCCTTACCGATCT1720.15607560592724337No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT1680.15244594067312142No Hit
CATAGAGTGATCCTCCTTTCTCAGCCAACTAACCTCCCACCCCAGCTGTC1670.15153852435959095No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGATAGCGAGAAGAGTGGAGGC1570.1424643612242861No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCTGTTTACTCGGAGATTTG1570.1424643612242861No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT1520.13792727965663368No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGGCAACATATCAGAAGCATCT1490.1352050307160422No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGGCAGAGAGTGTGTTGTATT1480.13429761440251173No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCTTCTGTTTACTCGGAGATTTGAC1450.13157536546192028No Hit
CATAGACACAGGCCAATCTCAGCAGCTTACACTGCACATGGGGTCTATGT1430.1297605328348593No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGTTAATGGCTTCCA1340.12159378601308495No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG1330.12068636969955447No Hit
CATAGATATTCTGCCCCCTCCTCTCCCAATAGCATTCTCTCAGGGCTGTT1320.11977895338602397No Hit
CATAGAGTGATCCTCCTTTCTCAGCTTACACTGCACATGGGGTCTATGTG1260.11433445550484106No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTGGTCAGTGTGGTCACTGAC1250.11342703919131059No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA1230.11161220656424962No Hit
CATAGAAACAGCAAAGCCCTCCACCACACTGACGGCAACATATCAGAAGC1180.1070751249965972No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACGGCAACATATCAGAAGCATCTA1180.1070751249965972No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCGTAGAAGTGTATTAATTATCT1180.1070751249965972No Hit
CATAGATATTCTGCCCCCTCCTCTCCCTGTGTCTTCAGCTCTTTGAGGCA1170.1061677086830667No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCCCAGGTAGCAAAACAGAGTCTA1160.10526029236953621No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTATAGGAATCTTTGGGAGGCTA1140.10344545974247524No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)