FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807974

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807974
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences75221
Sequences flagged as poor quality0
Sequence length150
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA53447.104399037502825No Hit
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC52757.012669334361416No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA43285.753712394145253No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC33484.450884726339719No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA24443.2490926735884926No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT22552.9978330519402827No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA18292.431501841241143No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA17422.315842650323713No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT17182.2839366666223526No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG16012.1283949960782227No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG15352.040653540899483No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA15172.016724053123463No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT12641.6803818082716262No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA11121.478310578163013No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC11061.470334082237673No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA9731.2935217558926364No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA8141.0821446138711266No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC7921.0528974621448797No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT6810.9053322875260897No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT6300.8375320721606998No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC6130.8149320003722365No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT5820.7737201047579798No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT5780.7684024408077531No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA5350.7112375533428165No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA5050.6713550737161165No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC4830.6421079219898699No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG4760.6328020100769732No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA4720.6274843461267465No Hit
CATAGATTTGGCACTCACATACACGCCCATGCAACCCCTTCATTTTGCTG4720.6274843461267465No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTCTCTTCCGCCTTTATCCTTCT4660.6195078502014065No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG4590.6102019382885099No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA4490.5969077784129432No Hit
CATAGATGCACCAGAAGCCACCTACCGTACATCGGCCGCACTGAAATTGT4480.5955783624253865No Hit
CATAGATGCACCAGAAGCCACCTACCGTAAGCCTTCTCTGATACCATCCC4400.5849430345249331No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGGATGACTTATGGAATCTG4340.5769665385995931No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA4190.5570252987862432No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGCAAAAGGGTAAGAGTTCTATG4190.5570252987862432No Hit
CATAGATGCACCAGAAGCCACCTACCGTACACAAGCACATTATTATTGGT4020.5344252269977798No Hit
CATAGACCATGTAATACCATCGTGAGCAGGATGACTTATGGAATCTGAAG3940.5237898990973265No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT3690.49055449940840995No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG3570.4746015075577299No Hit
CATAGATGCACCAGAAGCCACCTACCTTCTCAGAGTCACTCAAATATAGA3510.4666250116323899No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG3340.44402493984392655No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA3220.4280719479932466No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAAGTCACTCAAATATAGACC3180.42275428404301996No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3130.41610720410523655No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA3090.4107895401550099No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA2870.38154238842876326No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT2770.36824822855319655No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGTGTAGCCTTCTCTGATACCA2710.3602717326278566No Hit
CATAGAGCACCCAACTATCCTTCAGCACACAAGCACATTATTATTGGTTG2650.35229523670251656No Hit
CATAGACCCACTTACACACACAGGTTTATGAGCTGACATCCCAACCACAC2520.3350128288642799No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA2450.32570691695138326No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACAGCCCAGTTTTCCTTCTCTAT2440.32437750096382656No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC2400.3190598370135999No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT2380.3164010050384866No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTTACAAACTATCTCAACTCCC2370.3150715890509299No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGTCCATTTTTGGTTCTCTTCTAT2350.3124127570758166No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT2340.3110833410882599No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT2280.3031068451629199No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC2230.2964597652251366No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGAACAAGGGCATGGTCAAG2180.28981268528735327No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA2180.28981268528735327No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA2170.28848326929979656No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGAACAGGGAGATGTTCTAT2110.2805067733744566No Hit
CATAGATGCACCAGAAGCCACCTACCGTAGAACAAGGGCATGGTCAAGTG2040.2712008614615599No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA1940.25790670158599327No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA1910.25391845362332327No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAAGTATATGACACATTACACC1860.24727137368553992No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG1800.23929487776019995No Hit
CATAGATGTCCCCATTCATCCTGCAACACACTGACGACATGGTTCTACAC1720.2286595498597466No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA1700.22600071788463327No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAAGTATATGACACATTACACCAG1700.22600071788463327No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA1680.22334188590951995No Hit
CATAGACAGTCCTGCCGTGTACATGTACACTGATCTAGCTTCGGAATGTT1650.21935363794684995No Hit
CATAGACCATGTAATACCATCGTGAGCAGCACCCCTTCATTTTGCTGGAA1630.21669480597173663No Hit
CATAGAATTGCCTACTTTGGGACCCAGTCACCCGTAATCCCTCCCTTTTC1620.21536538998417992No Hit
CATAGAACTTTCAGTAATAGGGGACAAGAACAAGGGCATGGTCAAGTGTC1590.21137714202150998No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT1560.20738889405883995No Hit
CATAGATGCACCAGAAGCCACCTACCACTCCCGGATGTCCAGAGGCGAGC1540.20473006208372663No Hit
CATAGAATTCCCCAATGTCCTGTGCATTCCCCATTGTCCTTGCACACCAT1480.1967535661583866No Hit
CATAGACAGAACACCACACCCCTGTCTACTTAGGAGTTCTGGCCCCTGTC1390.18478882227037663No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGAAAAGTAGGGGACAGTTCTAT1270.16883583041969663No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTACACTGACGACAATGGGCAC1270.16883583041969663No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACCGTACACCCGTAATCCCTCCC1250.1661769984445833No Hit
CATAGAATCCCTGCCCTTGACCTTGGTCTGTCATAAAACAATGGGCACAC1230.16351816646946996No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA1190.1582005025192433No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTTCAACAC1180.15687108653168663No Hit
CATAGATTTGGCACTCACATACACGCTGACATCCCAACCACACGTCTATG1170.15554167054412996No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT1160.15421225455657328No Hit
CATAGATGCACCAGAAGCCACCTACCCCCTTTACCTACCTTCTCAGCTCT1160.15421225455657328No Hit
CATAGACCTGGTACTTCTCTTCTGGGTGACTGGTGAAAAGTAGGGGACAG1140.15155342258145996No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT1140.15155342258145996No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG1000.13294159875566663No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC990.13161218276810996No Hit
CATAGAATTGCCTACTTTGGGACCCACAATGGGCACACTTAACACCTCTA980.1302827667805533No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT950.1262945188178833No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCAGGAAAAT920.1223062708552133No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT910.12097685486765664No Hit
CATAGATCTGCTCACCTAAATTTCGTTCAGTGTAGGATGACTTATGGAAT900.11964743888009997No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTATGAGAC880.11698860690498665No Hit
CATAGATGTCCCCATTCATCCTGCAACAGGGCAAGTGTATGGTCAGTTCT880.11698860690498665No Hit
CCCGTAATCCCTCCCTTTTCTATGAGACCAAGTCTCTGCTACCGTACGTA820.10901211097964665No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCACTCCA820.10901211097964665No Hit
CATAGATGCACCAGAAGCCACCTACCGTACACCCGTAATCCCTCCCTTTT810.10768269499208996No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC810.10768269499208996No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)