FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807977

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807977
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences86934
Sequences flagged as poor quality0
Sequence length150
%GC41

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2021123.24867140589413No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTACTCCTAT81649.391032277359836No Hit
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG52135.996503094301424No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTACTCCTATGTAATGTCT49055.642211332735179No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCTTGTGAGGGCTGAAGTCTATGTG34623.9823314238387746No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCTCTATGTGTAGAACCAT28633.2933029654680563No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCCATCCTACATGTGTCTATGT26423.0390871235650034No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGTGATTACAGGTG26303.0252835484390457No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACCCCATCCTACATGTGTCTA18212.0946925253640694No Hit
CATAGAATTCTGTCCTATCTTGCTACTGGTATATAAAGTGGGGAAAGGAC15821.81977132077208No Hit
CATAGACTACCACTACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT13551.5586536913060483No Hit
CATAGACTACCACCACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT12921.4861849218947707No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTAGCATTTTAACACAGCA12741.4654795592058343No Hit
CATAGAGATGTCAAGAGCAATGCCCGGCCACATTATTTTCTATGTGTAGA12581.4470747923712242No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGACACTCTTGGTCTTTG11851.3631030436883154No Hit
CATAGAGGTAGGCATTTCATCTATATTGCAACTCCTATGTAATGTCTTAT9981.147997331308809No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACATTATTTTCTATGTGTAGA6640.7637978236363219No Hit
CATAGAGAATACAATGAACTGTGATGGCATTGCTCTTTGACTTATGATGG6190.7120344169139807No Hit
CATAGAAGCAGCATTGATCATCCTCCAGCAGCATTTTAACACAGCATTGA4320.49692870453447446No Hit
CATAGAGTTTTGTTCCCTTGCTGGCATAGGATGGGTTTTTGCCAGATAGC4270.4911772148986588No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAGAGTGCTGGAATTATAGGCG3660.4210090413417075No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCAGTACAGGAGCACCCTCTAT3590.4129569558515655No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGTG3420.39340189108979223No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTAAGGCTTGTGAGGGCTG3290.3784480180366715No Hit
CATAGAAGCAGCATTGATCATCCTCCAGAAGCAGCATTTTAACACAGCAT3190.36694503876504014No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA3180.365794740837877No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTATTACTACAGGTG3110.3577426553477351No Hit
CATAGACTCAAGAAACTTACAATCATGGCATTGCTCTTTGACTTATGATG2930.3370372926587986No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCCATCCTACATGTGTCTATGTG2640.3036786527710677No Hit
CATAGAAGGTGATAATCATGACAGCCAATATTTACTGAATAGTTTCTATT2570.29562656728092573No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTACATGCCTAGCCATTTT2570.29562656728092573No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGTGTAAGGGAAGCCAC2430.2795223963006419No Hit
CATAGAAGCAGCATTGATCATCCTCCATTTTAACATCTTTAAGATCTTTA2420.2783720983734787No Hit
CATAGAAGCAGCATTGATCATCCTCCAGCATTTTAACACAGCATTGAAGT2420.2783720983734787No Hit
CATAGACCATCTGCGCATCCTGTCTGCTCTATGTGTAGAACCATGTCGTC2240.2576667356845423No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCACCCAGTACAGGAGCACC2200.25306554397588976No Hit
CATAGACCATCTGCGCATCCTGTCTGGCTTCCCTGCTTGTCTTTCATCTA2170.24961465019440035No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGAG2140.24616375641291094No Hit
CATAGACTACCACTACCCAGCACAGCATTTTAACACAGCATTGAAGTTCT1900.2185566061609957No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCG1860.21395541445234315No Hit
CATAGAGGGACGGAGGCAAGAGGATAGTTTGAGGGTAATGCTCTATGTGT1730.1990015413992224No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGAAGTCCCATGATCTATGTG1630.18749856212759106No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAAGTGAAGGAGAGGCCAC1610.18519796627326476No Hit
CATAGACCATCTGCGCATCCTGTCTGCTCTTTGACTTATGATGGAGTTCT1600.18404766834610164No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCA1580.18174707249177538No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCTAGCCATTTTTGGTTCTATG1570.18059677456461223No Hit
CATAGAACATCGCACACACATGGAACCATGTCGTCAGTGTACTCCTATGT1550.17829617871028597No Hit
CATAGAAGCAGCATTGATCATCCTCCAACGGTAGCATTTTAACACAGCAT1450.16679319943865462No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTAGGGATAG1420.1633423056571652No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCCAGTACAGGAGCACCCTC1340.15413992223986012No Hit
CATAGAAGGTGATAATCATGACAGCCACCCCATCCTACATGTGTCTATGT1330.152989624312697No Hit
CATAGACCATCTGCGCATCCTGTCTGCTTTTTACATGTATTCCCGTTTCC1290.14838843260404444No Hit
CATAGAGGTGAGCGGCTGTCTCCACCCAGTACAGGAGCACCCTCTATGTG1280.14723813467688132No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1260.14493753882255503No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGTAAAGAGGGAGCCAG1200.13803575125957623No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCACTTGGTCCAGACTTTCTATGTG1180.13573515540524994No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1150.13228426162376056No Hit
CATAGACCATCTGCGCATCCTGTCTGCTCTATGTGTAGAACCATAGTCTT1090.12538247406078173No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGTTAGGATTACAGGCA1030.11848068649780294No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG970.11157889893482413No Hit
CATAGACCATCCTCCCACCTTGACCTTCCAAAGTGCTAGGATAATAGGTG970.11157889893482413No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA960.11042860100766098No Hit
CATAGATCCCAGACTTTAGAAAATATACCATGTCGTCAGTGTACTCCTAT950.10927830308049785No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGCCACCCCATCCTACATGTG930.10697770722617157No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAACAGGTACTGGGATTACAGG930.10697770722617157No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA900.10352681344468218No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)