FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807979

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807979
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57129
Sequences flagged as poor quality0
Sequence length150
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA754513.20695268602636No Hit
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG589010.310000175042449No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCTTGTGAGGGCTGAAGTCTATGTG35546.221008594584187No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCTCTATGTGTAGAACCAT34556.047716571268532No Hit
CATAGAGATGTCAAGAGCAATGCCCGGCCACATTATTTTCTATGTGTAGA27724.852176652838313No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCCATCCTACATGTGTCTATGT27054.734898212816608No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACCCCATCCTACATGTGTCTA18103.168268305063978No Hit
CATAGACCATCTGCGCATCCTGTCTGGGGTTCATACACACGATCCGACAT16072.81293213604299No Hit
CATAGACTACCACTACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT14612.5573701622643488No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACATTATTTTCTATGTGTAGA13562.3735755920810795No Hit
CATAGACTACCACCACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT13122.2965569150519003No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA11792.0637504594864255No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGTGATTACAGGTG9341.63489646239213No Hit
CATAGAGCCTGGCATTTGAGGTAAGGAACACAGGTGGATTTGGAAGCTGC7741.3548285459223863No Hit
CATAGAGTTTTGTTCCCTTGCTGGCAGTGTACTCCTATGTAATGTCTTAT5180.906719879570796No Hit
CATAGAATTCTGTCCTATCTTGCTACTGGGGTTGAAGGCATGACTTCTAA4910.8594584186665267No Hit
CATAGAAGCAGCATTGATCATCCTCCAAGGCTTGTGAGGGCTGAAGTCTA4910.8594584186665267No Hit
CATAGACATGAGTGGCCGAACAGACCGTATAAAGTGGGGAAAGGACACCT4830.8454550228430394No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTAGGGATAGTTTGAGGGT4790.8384533249312959No Hit
CATAGAGTTTTGTTCCCTTGCTGGCATTGCTCTTTGACTTATGATGGAGT4460.7806893171594111No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGACCAAGACTCCTATGT4150.7264261583433983No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGACCAAGAAGCTATATA4140.7246757338654624No Hit
CATAGACCATCCTCCCACCTTGACCTATCCTCCCATCTCAAGTCTCACTC4000.7001697911743597No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCAGTACAGGAGCACCCTCTAT3830.6704125750494495No Hit
CATAGAAGGTGATAATCATGACAGCCACCCCATCCTACATGTGTCTATGT3460.6056468693658212No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCACCCAGTACAGGAGCACC3430.6003955959320135No Hit
CATAGACTACCACTACCCAGCACAGCATTTTAACACAGCATTGAAGTTCT3190.5583854084615519No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCCATCCTACATGTGTCTATGTG3100.5426315881601289No Hit
CATAGAAGCAGCATTGATCATCCTCCATTTTAACATCTTTAAGATCTTTA3010.5268777678587058No Hit
CATAGACTCAAGAAACTTACAATCATGGCATTGCTCTTTGACTTATGATG2910.5093735230793467No Hit
CATAGAAGCAGCATTGATCATCCTCCAGCAGCATTTTAACACAGCATTGA2550.44635824187365436No Hit
CATAGAAGCAGCATTGATCATCCTCCATACGGTAGCAGAGGCACTTGGTC2040.35708659349892347No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGCCACCCCATCCTACATGTG1830.3203276794622696No Hit
CATAGAGAATACAATGAACTGTGATGGCATTGCTCTTTGACTTATGATGG1830.3203276794622696No Hit
CATAGAGGTGAGCGGCTGTCTCCACCCAGTACAGGAGCACCCTCTATGTG1710.2993225857270388No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCCAGTACAGGAGCACCCTC1680.29407131229323114No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTGGTTGGGAGTTCGAGAC1570.2748166430359362No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGAAGTCCCATGATCTATGTG1540.2695653696021285No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTACTCCTATGTAATGTCT1500.2625636716903849No Hit
CATAGAACATCGCACACACATGGAACCATGTCGTCAGTGTACTCCTATGT1500.2625636716903849No Hit
CATAGACTACCACTACCCAGCACAGGAGCCACCCCATCCTACATGTGTCT1420.24856027586689775No Hit
CATAGAGATCAATCCCTGTCTACATAACCATGTCGTCAGTGTACTCCTAT1420.24856027586689775No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCCGGCCACATTATTTTCTATG1350.23630730452134643No Hit
CATAGACCATCTGCGCATCCTGTCTGGCTTCCCTGCTTGTCTTTCATCTA1340.23455688004341055No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTAAAGTGGG1250.21880305974198744No Hit
CATAGACCATCCTCCCACCTTGACCTTCCCTGCTTGTCTTTCATCTATGT1230.21530221078611564No Hit
CATAGAGGGACGGAGGCAAGAGGATACAGAGACTTGGTCTCATAGAGGGA1210.21180136183024384No Hit
CATAGAGGTAGGCATTTCATCTATATTGCAACTGTCCTTTCCCCATCTCC1060.18554499466120533No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTACTCCTAT980.17154159883771813No Hit
CATAGAACATCGCACACACATGGAACATCGCTGACTTCTCTTAAACAGTT970.16979117435978225No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAGAGTGCTGGAATTATAGGCG950.16629032540391045No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGTG940.16453990092597454No Hit
CATAGACCATCTGCGCATCCTGTCTGCTCTTTGACTTATGATGGAGTTCT920.16103905197010274No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCACTTGGTCCAGACTTTCTATGTG920.16103905197010274No Hit
CATAGAACATCGCACACACATGGAACCATGTCGTCAGTGTAGGGATAGTT830.14528523166867965No Hit
CATAGAGGGACGGAGGCAAGAGGATAGTTTGAGGGTAATGCTCTATGTGT830.14528523166867965No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGTTTGTCTTCCATGCTTCTATG800.14003395823487197No Hit
CATAGATTGCACCTAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG790.13828353375693606No Hit
CATAGACCGGGGGTAGATAGGTGGTTGGGAGTTCGAGACCAGTCTATGTG790.13828353375693606No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCTAGCCATTTTTGGTTCTATG740.12953141136725657No Hit
CATAGACATGAGTGGCCGAACAGACCTAGACATGCCTAGCCATTTTTGGT700.12252971345551296No Hit
CATAGAGTTTTGTTCCCTTGCTGGCTTCCCTGCTTGTCTTTCATCTATGT680.11902886449964116No Hit
CATAGATGACATAGACCTTATACCCTCATCAAAAACTAATCCCAGAGCAC670.11727844002170527No Hit
CATAGAGCCTGGCATTTGAGGTAAAGTGGGGAAAGGACACCTCTATGTGT640.11202716658789756No Hit
CATAGACATGAGTGGCCGAACAGACCACTCCTATGTAATGTCTTATTTTG640.11202716658789756No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATGACAGGCA640.11202716658789756No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCG630.11027674210996168No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAACAGGTACTGGGATTACAGG630.11027674210996168No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGAG620.10852631763202576No Hit
CATAGACATGAGTGGCCGAACAGACCAAGTCAGTCTTTTGCAAGTTTGTC620.10852631763202576No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGACTGCTCTTTGACTTA610.10677589315408988No Hit
CATAGACCATCTGCGCATCCTGTCTGCTCTATGTGTAGAACCATGTCGTA600.10502546867615396No Hit
CATAGAGGGACGGAGGCAAGAGGATAGTTTGAGGGTAATGCTCTTTGACT600.10502546867615396No Hit
CATAGAAGCAGCATTGATCATCCTCCATGTGTCTATGTGTAGAACCATGT590.10327504419821806No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)