FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807981

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807981
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27029
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1052138.924858485330574No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG9023.3371563875837063No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT8283.063376373524733No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG5502.0348514558437234No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA4581.6944763032298642No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG4291.5871841355581042No Hit
CATAGAGGCGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3071.1358170853527692No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG2911.0766214066373154No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT2680.9915276184838506No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCCCATGATCTATGTGTAGA2520.9323319397683969No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG1970.7288467941840245No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT1960.7251470642643086No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT1760.6511524658699915No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCTCAAACTCGGC1730.6400532761108438No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACTATGGCTTAATG1690.6252543564319805No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG1300.4809648895630619No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT1210.4476673202856192No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCCATTGTCGCCTTCTCTTCTCTAT1200.4439675903659033No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGAGGCAAGGGTACTATTT1120.4143697510081764No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT1110.4106700210884605No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA1040.3847719116504495No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG1030.38107218173073365No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTATAGAGAAGCTTTGAGATT1020.3773724518110178No Hit
CATAGATGTTGTTGTTCTGTTGCCCATACGGTAGCAGAAGCTTTGAGATT1010.3736727218913019No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTACCAAAAGCACAAGGG990.3662732620518702No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGGAGAATCTATGTGTA840.3107773132561323No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA830.30707758333641644No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCGTCAGTGTAGGTAAACAAA810.29967812349698475No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCGTCAGTGTAGGTAAACAA800.29597839357726885No Hit
CATAGATAGCAGCAATCTCAGGCCTCTACGGTAGCAGGAAAGTTGGAACC790.292278663657553No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT750.2774797439786896No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA690.25528136446039434No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCCAGAAGCTTTGAGATTTG680.25158163454067856No Hit
CATAGATCAAGGTGTGAGCATGGTCCGTGTCGTCAGTGTCAGGGTAATTC660.2441821747012468No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCTTTCAGGTCA660.2441821747012468No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAGAAGCTTTGAG650.24048244478153094No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA650.24048244478153094No Hit
CATAGATCAAGGTGTGAGCATGGTCCTCCGATGCTTATTACATTGTTCTA650.24048244478153094No Hit
CATAGACGGGAAGAGTAAGACCACCCACACTGAAACATTTTCTGGTCAGC640.2367827148618151No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAGGCAAGGGTAC630.23308298494209923No Hit
CATAGAACAATCAGGCACCCACCATGTGTAGAACCATGTCGTCAGTGTAG630.23308298494209923No Hit
CATAGACTCACTCTGTCACCCAAGCTACACTGAAACATTTTCTGGTCAGC600.22198379518295164No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGGAAAGTTGGAACCTATCAGTGT600.22198379518295164No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT590.2182840652632358No Hit
CATAGAGGAAAGAACAACTGCGGACGATAGAGGCAAGGGTACTATTTTGA570.21088460542380405No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA550.20348514558437233No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCGTCAGTGTACTATGGCTTA540.1997854156646565No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTCAGGAAAGTTGGAA520.19238595582522475No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTTGGGTTCTATGTGTAGAAC510.1886862259055089No Hit
CATAGAGGGCTATCCTTGCTCAGATCACATTTATCGGGAGCCACAGATCT500.18498649598579303No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG490.18128676606607716No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA490.18128676606607716No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGAAAGTTGGAACCTATCAGTGTC480.17758703614636132No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTTACGGTAGCAGAGGCAAGGGTA480.17758703614636132No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGTGTAACCTGTGTATATTCTCCT470.17388730622664544No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA470.17388730622664544No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA470.17388730622664544No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA460.1701875763069296No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA460.1701875763069296No Hit
CATAGAACAATCAGGCACCCACCATGTCGAGAAGCTTTGAGATTTGTGTC460.1701875763069296No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTACTATGGCTTAATGTTTCT450.16648784638721373No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTATGTGTAGACCAAAAGCACAAG450.16648784638721373No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGCAGGAAAGTTGGAAC440.16278811646749788No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCACAGGGTAATTCTGGCCTT420.15538865662806614No Hit
CATAGACACAACGTTTGAGACTGCCTACACTATGGCTTAATGTTTCTCTT420.15538865662806614No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCGTGTAGAAGCTTTGAGA420.15538865662806614No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC400.14798919678863443No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAACCTGTGTATATT390.14428946686891858No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA380.1405897369492027No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTCTATGTGTAGAACCATGTCGTC380.1405897369492027No Hit
CATAGAGGAAAGAACAACTGCGGACGTAGCAGAGACTTGGTCTCATAGAG370.13689000702948684No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA370.13689000702948684No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGTGTACCAAAAGCACAAGGGAGA350.12949054719005512No Hit
CGTAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA350.12949054719005512No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA350.12949054719005512No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGGTTTCCTGGGCATCAAGTC330.1220910873506234No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA320.11839135743090755No Hit
CATAGATCCAGCTTCATCCATGTCCCTGAAAAGAACACGAATGAGGAAGA320.11839135743090755No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGGTAAACAAACTT320.11839135743090755No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG300.11099189759147582No Hit
CATAGAGATCTTCTCGGCTTAGCGGCTGTCTCCACAAGTCCGCGCAGAGC300.11099189759147582No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG280.1035924377520441No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGTGCCATACCAAGA280.1035924377520441No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGCCATACCAAGAAT280.1035924377520441No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)