FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807983

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807983
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29487
Sequences flagged as poor quality0
Sequence length150
%GC38

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA432414.664089259673755No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA18296.202733407942483No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG15055.103944110964154No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC12314.1747210635195175No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG11663.954284939125716No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG9363.1742801912707295No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG8522.8894088920541257No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG7852.662190117678977No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT6902.3400142435649607No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT6272.126360769152508No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA5881.9940990945162274No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA5241.7770542951131008No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT5101.7295757452436666No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG4351.4752263709431275No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT3911.3260080713534779No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT3841.3022687964187607No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC3771.2785295214840438No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT3571.2107030216705668No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT3471.1767897717638283No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT3061.0377454471462No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG2940.9970495472581137No Hit
CATAGATTCCTCCAAAGACTGCAGGGTCCTAAATGTCTTTGTCCTTCTAT2900.9834842472954183No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC2580.874961847593855No Hit
CATAGACCCTCTCTTACCCTTCCACCCTGGGAGAAGAAATGTTGGTCTAT2340.7935700478176824No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT2150.7291348729948791No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA2100.7121782480415099No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT1690.5731339234238817No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG1320.44765489876894904No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC1310.4442635737782752No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAGCCCGTTCTCTCTGTT1210.4103503238715366No Hit
CATAGATGGTATTTGAGTGGGGAAACAGAGTTGATGTTCGCACCCAAGCT1030.34930647403940723No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTGCCATGCTGAAGTCCCATGATC920.3120018991419948No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG910.3086105741513209No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA910.3086105741513209No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTGTTGATGTTCGCACCCAAGCTC870.2950452741886255No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACCCTGGGAGAAGAAAT820.2780886492352562No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGGCCATGCTGAAG760.25774069929121307No Hit
CATAGATGGCCCAGAATCCTTTGTAGAACCATGTCGTCAGTGTAGATCTC730.2475667243191915No Hit
CATAGATGGGACAGCGACAATGACAGTGTATGTGCTCGTATCTTGGCCAT710.2407840743378438No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTATGATGGGAGTGTCTG710.2407840743378438No Hit
CATAGAGGTGAGCGGCTGTCTCCACTGAATGATGGGAGTGTCTGCTGGTC710.2407840743378438No Hit
CATAGACCAGTACGCCTTACCCCTTGGGCTGGTGTTTTCCTTGATCTATG690.23400142435649607No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTAGTTGATGTTCGCACCCAAGCTC660.22382744938447452No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTGTGCATAAAAACTGTCGGAGGT630.21365347441245297No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT620.21026214942177912No Hit
CATAGACCAGTACGCCTTACCCCTTGGGTCCTAAATGTCTTTGTCCTTCT590.20008817444975752No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG590.20008817444975752No Hit
CATAGAGGTGAGCGGCTGTCTCCACATAGAGTCTGAATGATGGGAGTGTC570.1933055244684098No Hit
CATAGAGGTGAGCGGCTGTCTCCACACTGACGAATGAGGAAACAGGCACT560.18991419947773594No Hit
CATAGAAGCATCCAGGTTTCTCATTTGTGATGCCTGGCCAACTGTTTTTT550.1865228744870621No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACAGTTGTGGAAAGTGC550.1865228744870621No Hit
CATAGAGCAACAATGAAGGTGCACAACAACAACAAAACTCGTGACTTCTA540.18313154949638824No Hit
CATAGATGGGACAGCGACAATGACAGAGCGAGACTTGATGTTCGCACCCA530.1797402245057144No Hit
CATAGAGGTGAGCGGCTGTCTCCATGGGTCCTAAATGTCTTTGTCCTTCT530.1797402245057144No Hit
CATAGATGGCAAATGGTGGGATCTCTGAGACCAACGAATGAGGAAACAGG520.17634889951504054No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGCCATGCTGAAGTCCCA500.16956624953369281No Hit
CATAGACCCCATGACTCAGCTCCTCAATCCTGTGTTCATGGCTTCTATGT480.1627835995523451No Hit
CATAGATGACATGGGAAATTATGCTGCTATGCCTGGCCAACTGTTTTTTC460.1560009495709974No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGTGGCCATGCTGAAGTCCCAT450.15260962458032354No Hit
CATAGACCCTCTCTTACCCTTCCACCTTCCTTTCAATAGCCTTTTAGGTC440.14921829958964966No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG430.1458269745989758No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGGTTGATGTTCGCACCCAAG420.14243564960830196No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG400.13565299962695426No Hit
CATAGAACACGAAGATTTCAGATTAGCCTAACACGCACAAAGGCACTGTC380.12887034964560654No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACCCTGGGAGAAGAAATGTTGG380.12887034964560654No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG360.12208769966425882No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGGTGCATAAAAACTGTC360.12208769966425882No Hit
CATAGACCAGTACGCCTTACCCCTTGTAGCAGGCCCTTCAGCATCATTTC340.11530504968291111No Hit
CATAGACCCCATGACTCAGCTCCTCATAGATGATGGGAGTGTCTGCTGGT340.11530504968291111No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG340.11530504968291111No Hit
CATAGATGACATGGGAAATTATGCTGCTCGCCATGCTGAAGTCCCATGAT330.11191372469223726No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGGTTTACCTCTCAGTTATC330.11191372469223726No Hit
CATAGACCAGTACGCCTTACCCCTTGACACTGTCATTGTGGGTTTTAACT320.10852239970156341No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)