FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807988

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807988
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19375
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG994851.34451612903226No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA6213.2051612903225806No Hit
CATAGACTTGATGCCCAGGAAACCTCCTGCCCCTGCAGGCTGAAAGTGCC4322.2296774193548385No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC3271.6877419354838707No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT2511.2954838709677419No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC2241.1561290322580644No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC1730.8929032258064515No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT1440.743225806451613No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG1360.7019354838709677No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT1350.6967741935483871No Hit
CATAGACAGGAGGAGGAAGAAGAGGACTGCTTGAACCCAGGAAGTCGAGG1220.6296774193548387No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT1150.5935483870967742No Hit
CATAGAGAAGAGAAGGCGACAATGGCGTGAACCCGAGAGGTGGAGCTTGC1030.5316129032258065No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTCAGACATGTTTCCTA970.5006451612903225No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCAACAGAACAACAACATC930.48No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA870.4490322580645161No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT780.40258064516129033No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGACCAAGTTTCTGC750.3870967741935484No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG750.3870967741935484No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC730.3767741935483871No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA680.35096774193548386No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGCACTGACGACATGGTGTTAC620.32No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA620.32No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT570.29419354838709677No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACTAACTTAGCTGCTTTTCTC570.29419354838709677No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG540.2787096774193548No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG540.2787096774193548No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG530.2735483870967742No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG530.2735483870967742No Hit
CATAGACTTGATGCCCAGGAAACCTCACTTCAGTTGACTATAAGAAACAC480.247741935483871No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG480.247741935483871No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT420.2167741935483871No Hit
CATAGAGAAGAGAAGGCGACAATGGCCGCTAAGCCGAGAAGATCTCTATG410.21161290322580648No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG400.2064516129032258No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACTTCAGTTGACTATAAGAAA380.1961290322580645No Hit
CATAGACCCTTAGAGTTTCAGCCTCCCAAACTGCTGAGATTCCAGGCATG370.19096774193548385No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGTGTGTGTGCTCATACAGAAT360.18580645161290324No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA360.18580645161290324No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG350.18064516129032257No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC350.18064516129032257No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGCACTGACGACATGGTGGGTG340.17548387096774193No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG330.17032258064516131No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT330.17032258064516131No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG320.16516129032258065No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG320.16516129032258065No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACGACATGGTTCTACACATAGAAC320.16516129032258065No Hit
CATAGAACAATGTAATAAGCATCGGAGGACACTGACGACATGGTTCTACA310.16No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG300.15483870967741936No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGATCTGCG300.15483870967741936No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC290.14967741935483872No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG290.14967741935483872No Hit
CATAGAACAAGGCCAGAATTACCCTGCTTTTCTCTTCTTGGCATCTATGA270.1393548387096774No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG260.13419354838709677No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGCAGAGGCTGCAGTGAGCCA260.13419354838709677No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCAAGATTTATTGCAAACAGTGAAA260.13419354838709677No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACACTGACGACATGGTTCTA250.12903225806451613No Hit
CATAGACAGCTCACAGACTGCATACTTTCGCGGTGAGTGTTACAGCTCTT250.12903225806451613No Hit
CATAGATCATGGGACTTCAGCATGGCGGGGTTTGCAGATTTGGACCTGCG240.1238709677419355No Hit
CATAGAACAAGGCCAGAATTACCCTGGGCAACAGAACAACAACATCTATG240.1238709677419355No Hit
CATAGATTCTCCCTTGTGCTTTTGGTATGATCTGAGCAAGGATAGCCCTC240.1238709677419355No Hit
CATAGAACAATGTAATAAGCATCGGAGGAGAATCTAGGCAGTCTCAAACG240.1238709677419355No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC230.11870967741935484No Hit
CATAGATTCTCCCTTGTGCTTTTGGTGACTTGGGCAACAGAACAACAACA230.11870967741935484No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG230.11870967741935484No Hit
CATAGAGGGTGTTTTTCGGTGTCACAAGAGGTTGTGGCCAAAGACCAGAT230.11870967741935484No Hit
CATAGGTCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG220.1135483870967742No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACCATGGGGTGGTCTTACTCT220.1135483870967742No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACACTGACGACATGGTTCTAC220.1135483870967742No Hit
CATAGATCACGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG220.1135483870967742No Hit
CGTAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG210.10838709677419354No Hit
TAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCGAG210.10838709677419354No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG210.10838709677419354No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGAGAGGCTGTTTGAGATC210.10838709677419354No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTTGACCTGCG210.10838709677419354No Hit
CATAGATCATGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCGA200.1032258064516129No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA200.1032258064516129No Hit
CATAGACTTGATGCCCAGGAAACCTCAAACGTGCCCAGGCAGTCTCAAAC200.1032258064516129No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)