FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808001

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808001
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences109276
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA4177138.22522786339178No Hit
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG49484.527984186829679No Hit
CATAGACCAGCTTTGCATGAGTGTGGTTAATGAAGCTCTTCCATGTCCCA43423.9734250887660605No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG36603.349317324938687No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT27202.4891101431238334No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC19231.7597642666276219No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG18231.6682528643068926No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG17421.594128628427102No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG15581.4257476481569604No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT8620.7888282880046853No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT8560.7833376038654416No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAATGTTGGAGAGGCACATCTA8340.7632050953548812No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTACGGTAGCAAAGCTG7190.6579669826860427No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTTACGGTAGCAAAGCT5490.5023975987408031No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG5380.49233134448552296No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGATGTGGCATGGAGAAGGGTCT4840.4429151872323292No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT4740.4337640470002562No Hit
CATAGACCTGACCTCATGATCTGCCTACCTCCGCCTCCCAAAGTGCTGGG4260.3898385738863062No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT4200.38434788974706247No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC4010.36696072330612395No Hit
CATAGAAAGGCAATGTTCAAGTGGTTTTGAGGTAAAACTATTAGCGAGAC3970.3633002672132948No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA3700.33859218858669793No Hit
CATAGATGATGTGAAAAGGACCCATGGGAAAGCTGTCTGTGTAGGTGATC3700.33859218858669793No Hit
CATAGATGATGTGAAAAGGACCCATGGGATGATGTGGCATGGAGAAGGGT3600.32944104835462495No Hit
CATAGATACGATCATAAGGGTGGGGCTGGGCTCAGTGGCTTATGCCTGTA3530.32303525019217394No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC3460.3166294520297229No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTACTTGGCCTCAGTTTCCCCT3370.3083934258208573No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGGGGCACAAA3280.30015739961199167No Hit
CATAGACTGGCGGTGATTGCTTTCCTAGAGACTTGGCCTCAGTTTCCCCT3190.291921373403126No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAAGCAGATCTGTGTTCTATGTGTA3000.27453420696218744No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTACCCCAGGCATGAAT2980.27270397891577286No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGGGGAGACACTGGGGGCACA2980.27270397891577286No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC2960.2708737508693583No Hit
CATAGAAAGGCAATGTTCAAGTGGTTTTGACTTGGCCTCAGTTTCCCCTC2910.26629818075332184No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG2890.26446795270690726No Hit
CATAGATGTGAGCACTACTGATAATCCCTTACGGTAGCAAAGCTGCTATG2760.2525714704052125No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGGAGAAGGGTCTATGTGTAGA2690.24616567224276148No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTGACTTGGCCTCAGTTTCCCC2580.23609941798748124No Hit
CATAGATGTGAGCACTACTGATAATCCCTCATTACTCTGGTTCTATGTGT2430.22237270763937186No Hit
CATAGACTTACTGCCCTCACTCCGTCTACGGTAGCAAACACTCAAAACAG2350.21505179545371353No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACTTGGTCTCATAGAGGGGAG2310.21139133936088436No Hit
CATAGATGGTGGGTTCTGGAGAGAGGGCGAAAGTGATCAGAAGCTCTATG2310.21139133936088436No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTCTTGGCCTCAGTTTCCCC2280.20864599729126249No Hit
CATAGACCTGACCTCATGATCTGCCTACCTCAGCCTCCCAGATTGCTGGG2170.1985797430359823No Hit
CATAGACTTACTGCCCTCACTCAGTCTGCATAGCCACATCTATGTGTAGA2010.1839379186646656No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTCTATGTGTAGAACCATGTCGTC2000.18302280464145831No Hit
CATAGATGACCTGTTAATCTGCCCCCGTATGATGTGGCATGGAGAAGGGT1980.18119257659504373No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGCAGAGACTTGGTCTCATAGAG1970.18027746257183647No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1910.17478677843259272No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGAGACACTGGGGGCACAAAG1870.17112632233976355No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTTGGCCTCCCAAAGTGCTGGG1850.16929609429334896No Hit
CATAGATGACCTGTTAATCTGCCCCCGAGACTTGGCCTCAGTTTCCCCTC1830.16746586624693435No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1730.15831472601486146No Hit
CATAGATGACCTGTTAATCTGCCCCCGTACCATCAATTTAAGGTAGGCAC1720.15739961199165417No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1710.15648449796844688No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1710.15648449796844688No Hit
CAGTTTCCCCTCCTTCTATGTGTAGAACCATGTCGTCAGTGTAGATCTCG1700.1555693839452396No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTCTTGGCCTCAGTTTCCCCTC1640.15007869980599584No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTGACTTGGCCTCAGTTTCC1620.14824847175958125No Hit
CATAGAGGGGAGACACTGGCTATAAGAACAGAGACTTGGTCTCATAGAGG1610.14733335773637396No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1610.14733335773637396No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1610.14733335773637396No Hit
CATAGACTTACTGCCCTCACTCCGTCTCATAGAGGGGAGACACTGGGGGC1590.14550312968995938No Hit
CATAGAGGTGAGCGGCTGTCTCCAGAAGTCCGCGCAGAGCCTTCAGGTCA1570.1436729016435448No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1550.1418426735971302No Hit
CATAGATTAGGGGTGACGGACTAGCCATGCTGAAGTCCCATGATCTATGT1540.14092755957392292No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCGGATTCAAGCAATTCTTCTATGT1530.14001244555071563No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAAAGCCTTCAGGTCA1510.13818221750430104No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTCAGTTTCCCCTCCTTCTATGT1500.13726710348109372No Hit
CATAGACCAGCTTTGCATGAGTGTGGGGAAGTAGGGAATGATTACAAGTT1490.13635198945788643No Hit
CATAGATGACCTGTTAATCTGCCCCCACTCAGTCTGCATAGCCACATCTA1490.13635198945788643No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCATAGACACCTAGTGATTACCTGG1450.1326915333650573No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA1440.13177641934185No Hit
CATAGACCTCCTTTCCTCCACGGCAAAGCTGCTATGGGATCTTCTATGTG1420.12994619129543541No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1380.12628573520260625No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTCCCTTGCCCTGTGGCCCTGGCT1370.12537062117939896No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1370.12537062117939896No Hit
CATAGAGGGGAGACACTGGCTATAAGAATAGAGGGGAGACACTGGGGGCA1350.12354039313298437No Hit
CATAGATGACCTGTTAATCTGCCCCCACAAACACATCCCTGTCCCAGTTG1340.12262527910977708No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCTGCGCAGAGCCTTCAGGTCA1330.12171016508656979No Hit
CATAGACACACCCAACTCTGCTCAGTGTACTCAGTCTGCATAGCCACATC1230.11255902485449688No Hit
CATAGATGATGTGAAAAGGACCCATGGCGTCAGTGTGCAAAGCTGCTATG1230.11255902485449688No Hit
CATAGACTGGCGGTGATTGCTTTCCTGAGACTCAGTCTGCATAGCCACAT1220.11164391083128959No Hit
CATAGACCAGCTTTGCATGAGTGTGGGCAGTAAGACCAGTGTAGCAGACC1210.1107287968080823No Hit
CATAGATGGTGGGTTCTGGAGAGAGACACTGGGGGCACAAAGTTCTATGT1160.10615322669204581No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGATCAGAAGCTCTATGTGTAGA1130.10340788462242395No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)