FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808002

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808002
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences92664
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3319635.824052490719154No Hit
CATAGAAGAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG56186.062764396097729No Hit
CATAGAGGGTGCTCCTGTGCTGGGTAGTGGTAGTCTATGAGACCAAGTCT20902.255460588793922No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTGACTGTGTTAATTTAAAAGA19832.13998963998964No Hit
CATAGACACATGTAGGATGGGGTGGAGGATGATCAATGCTGCTTCTATGA13991.509755676422343No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTAAAGTGCTGTACTT13701.4784598117931451No Hit
CATAGACACATGTAGGATGGGGTGGCTGGGCATTGCTCTTGACATCTCTA13131.4169472502805835No Hit
CATAGAGGGTGCTCCTGTACTGGGTAGTGGTAGTCTATGAGACCAAGTCT11771.2701804368471035No Hit
CATAGAGCTATCTGGCAAAAACCCATCTAAAAAAATACAAACATTAGCCA10441.1266511266511265No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCACAGC10311.1126219459552793No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG9531.0284468617801952No Hit
CATAGACTTCAGCCCTCACAAGCCTTACCTCAAATGCCAGGCTCTATGAG9491.0241301907968574No Hit
CATAGAACTGTTTAAGAGAAGTCAGCGATGGTCTCTGACTGTGTTAATTT7540.813692480359147No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTAGTCTATGAGACCAAGTCT7100.7662090995424329No Hit
CATAGACACATGTAGGATGGGGTGGCTTCCCTTACACCTTCTGCCATGAT6930.7478632478632479No Hit
CATAGACTTCAGCCCTCACAAGCCTTACACTGCCATCACAGTTCATTGTA6400.6906673573340241No Hit
CATAGAGCATTACCCTCAAACTATCCCTACCGTATGCCATGATTGTAAGT5000.5395838729172062No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTACACTGATGAGGGTATAAGG4960.5352672019338687No Hit
CATAGATCATGGGACTTCAGCATGGGCATTGCTCTTGACATCTCTATGAG4960.5352672019338687No Hit
CATAGACACATGTAGGATGGGGTGGGCATTGCTCTTGACATCTCTATGAG4500.4856254856254856No Hit
CATAGAGCTATCTGGCAAAAACCCATCCTACACAGGTCAAGGTGGGAGGA4490.4845463178796512No Hit
CATAGACACATGTAGGATGGGGTGGCCTCTCCTTCACTTTCTGCCATGAT4420.4769921436588103No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCACAGCACTTT4300.46404213070879735No Hit
CATAGAAGAGTGAGACTTGAGATGGGACAGCCAGTAGCAAGATAGGACAG4250.45864629197962536No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACCAAAAACAATACAAAAAT4000.431667098333765No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACACTGCCAGCAAG3910.4219545886212553No Hit
CATAGAGCATTACCCTCAAACTATCCCTACCGTATCTCTGACTGTGTTAA3660.3949753949753949No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGACGACATGGTATATTT3470.3744712078045412No Hit
CATAGAAGAGTGAGACTTGAGATGGGAGGATAGGTCAAGGTGGGAGGATG3450.3723128723128723No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCGTGTCATCCCAGCCCTTT3440.3712337045670379No Hit
CATAGATCCACAAAGACCAAGAGTGTCGTCAGTGGTCTGTTCGGCCACTC3420.3690753690753691No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCCCAGCACTTT3270.35288785288785285No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGCTTCTGGAGGATGATCAAT3260.3518086851420185No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACACTGCCATCACA3190.3442545109211776No Hit
CATAGAACCAAAAATGGCTAGGCATGTGAGACTTGGCTGTCATGATTATC3110.33562116895450234No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAGTAATAGCACTTT2970.3205128205128205No Hit
CATAGAAGCATGGAAGACAAACAGCATGGCGGTGTTTGCAGATTTGGACC2970.3205128205128205No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACCAAAAATACAAAAAAAAT2780.3000086333419667No Hit
CATAGAAAGTCTGGACCAAGTGCCTCAGTGTTGGTATATTTTCTAAAGCC2520.27195027195027194No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTATTATCCTAGCACTTT2390.2579210912544246No Hit
CATAGAACCAAAAATGGCTAGGCATGGGCATTGCTCTTGACATCTCTATG2270.24497107830441164No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTATAATTCCAGC2200.23741690408357075No Hit
CATAGACACATGTAGGATGGGGTGGCCAGAGCCTTGGGAACTCATCGCCT2120.22878356211689546No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTATATTTTCTAAAGCCTGGG2000.2158335491668825No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTACG1790.19317102650435983No Hit
CATAGACACATGTAGGATGGGGTGGCTGTCATGATTATCACCTTCTATGA1790.19317102650435983No Hit
CATAGAAAGTCTGGACCAAGTGCCTTACCTCAAATGCCAGGCTCTATGAG1770.191012691012691No Hit
CATAGAAAATAATGTGGCTGGGCATTGCTCTTGACATCTCTATGAGACCA1740.18777518777518776No Hit
CATAGAAAATAATGTGGCCGGGCATTGCTCTTGACATCTCTATGAGACCA1680.1813001813001813No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1680.1813001813001813No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACTTGCG1650.17806267806267806No Hit
CATAGAAAAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG1630.17590434257100926No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1580.1705085038418372No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC1560.16835016835016833No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGAGGATGATCAATGCTGCTTCTAT1550.16727100060433395No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAATCCCAGCACTTT1550.16727100060433395No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGC1510.1629543296209963No Hit
CATAGAACCAAAAATGGCTAGGCATGTGGCTCACACCTGTAATCACAGCA1480.15971682638349305No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1470.15863765863765864No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAACTACAAAAAAATT1440.1554001554001554No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACTACAAATAAAAAAATTAG1430.15432098765432098No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTATAATTCCAGC1420.1532418199084866No Hit
CATAGAACCAAAAATGGCTAGGCATGTTGGCTCACACCTGTAATCACAGC1380.1489251489251489No Hit
CATAGAGCAGACAAACTTGCAAAAGACTACACTGACGACATGGTTATGTA1370.14784598117931452No Hit
CATAGAGGTGTCCTTTCCCCACTTTACACTGACGACATGGTTCTACACAT1310.14137097470430804No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1310.14137097470430804No Hit
CATAGACTGGTCTCGAACTCCCAACCTCAGGGTGATCTGCCCACCTTTGC1300.14029180695847362No Hit
CATAGAGGTGTCCTTTCCCCACTTTAACACTGGAGACAGCCGCTCACCTC1280.1381334714668048No Hit
CATAGACACATGTAGGATGGGGTGGCAGTGGGGTCGGGGGAACAGCACCC1260.13597513597513597No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCCCAGC1220.13165846499179834No Hit
CATAGAGGGTGCTCCTGTACTGGGTGTGCTGGGTAGTGGTAGTCTATGAG1210.13057929724596393No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTGCCATGATTGTAAG1200.12950012950012948No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGTGCTGGGTAGTGGTAGTCT1190.1284209617542951No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAACCCTAGCACTTT1190.1284209617542951No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAAGTTAATTAAAAAA1180.12734179400846068No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1180.12734179400846068No Hit
CATAGAAAATAATGTGGCCGGGCATGGTAGCTCATGCCTGTAATCCCAGT1130.12194595527928861No Hit
CATAGACACATGTAGGATGGGGTGGAGACAGCCGCTCACCTCTATGAGAC1120.12086678753345419No Hit
CATAGACACATGTAGGATGGGGTGGCATCCCTGCAACAGATGGAGCAGAC1120.12086678753345419No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1110.11978761978761979No Hit
CATAGATCATGGGACTTCAGCATGGTATATTTTCTAAAGCCTGGGATCTA1110.11978761978761979No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAATTAGCGAGGTGTG1090.11762928429595097No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG1040.11223344556677892No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAATCCTAACACTTT1020.11007511007511006No Hit
CATAGAGGTGTCCTTTCCCCACTTTACTCAGCACTCATTCTATCTCCTGT1010.10899594232927567No Hit
CATAGAACCAAAAATGGCTAGGCATGGTGGCTCACACCTGTAATCACAGC1000.10791677458344125No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAAATACAAAAATTAG980.10575843909177243No Hit
CATAGACACATGTAGGATGGGGTGGCTTCCCCTTTGCCTTCTGCCATGAT970.104679271345938No Hit
CATAGACTGGTCTCGAACTCCCAACCTCAAGTGATCTGCCCGTCTCACCC960.1036001036001036No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)