FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808015

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808015
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences83300
Sequences flagged as poor quality0
Sequence length150
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1186214.240096038415368No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT48675.842737094837935No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT29133.4969987995198077No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA25553.0672268907563023No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT24662.960384153661465No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG23252.7911164465786316No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA23032.764705882352941No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA16191.9435774309723888No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA13961.6758703481392558No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT13581.6302521008403361No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA13381.6062424969987994No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA11621.3949579831932772No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA11181.3421368547418968No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG10851.3025210084033614No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC9461.1356542617046819No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT9461.1356542617046819No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA9331.1200480192076832No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA8571.028811524609844No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT7710.9255702280912366No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG7070.8487394957983193No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT6970.836734693877551No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT5810.6974789915966386No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC5490.6590636254501802No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC5410.6494597839135654No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC5260.631452581032413No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG5060.6074429771908764No Hit
CATAGAAGTACCATCAGAGTGAACAGGCTACGGCAACATATCAGAAGCAT5040.6050420168067226No Hit
CATAGAGCCCCCAGAGAAGAATGACCGCCCCCAGGTAGCAAAACAGAGTC4890.5870348139255702No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTCATAGAGGAGAATGATAT4860.5834333733493398No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG4810.5774309723889556No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACATACGGCAACATATCAGAAGCA4250.5102040816326531No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGAAGACACAGCACACTCT4130.4957983193277311No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATACGGCAACATATCAGAAGC4090.4909963985594238No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTTGCTCCTTCTCACACAAA4010.48139255702280914No Hit
CATAGAGTGATCCTCCTTTCTCAGCCATGCTGAAGTCCCATGATCTATGT3940.4729891956782713No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTATAGACTCTGTTTACT3610.43337334933973587No Hit
CATAGATCACCAGATGCCAGTTGTGCCCCCCATATCATTGTGATCCTACC3450.4141656662665066No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCAGGGCAGAGAGTGTGTTG3380.4057623049219688No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGAATGATATTGTTGCAGATTT3380.4057623049219688No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCACGGCAACATATCAGAAGCATC3250.39015606242497No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA3200.38415366146458585No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGAGGAATCTTTGGGAGGCTA3190.382953181272509No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA3180.3817527010804322No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC3110.37334933973589435No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTGCTCCTTCTCACACAAATCTA2870.3445378151260504No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTACGGCAACATATCAGAAGCAT2840.3409363745498199No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTAGCAGAGACTTGGTCTCATAGAG2810.33733493397358943No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG2740.3289315726290516No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGCATTCTCTCAGGGCTGTTCT2730.3277310924369748No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT2650.31812725090036015No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTTCTGTTTACTCGGAGATTTGACT2620.31452581032412963No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT2610.3133253301320528No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCAGCATTCTCTCAGGGCTGTTCTC2590.31092436974789917No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT2590.31092436974789917No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGAAGTGTATTAATTATCTAT2540.30492196878751504No Hit
CATAGATATTCTGCCCCCTCCTCTCCCCAGGTAGCAAAACAGAGTCTATG2510.3013205282112845No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTCTGTTTACTCGGAGAT2500.3001200480192077No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT2470.2965186074429772No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATAACAATGCCTCACACACAGG2440.2929171668667467No Hit
CATAGAAACAGCAAAGCCCTCCACCATAGAGGAGAATGATATTGTTGCAG2390.28691476590636256No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGGCAACATATCAGAAGCATCT2330.2797118847539015No Hit
CATAGATCCCATACTCCTCCATTACCCTCTAGCCAAATTCCTTACCGATC2320.27851140456182477No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC2290.2749099639855942No Hit
CATAGAAACAGCAAAGCCCTCCACCAGGAAACATTGGAAAGATGGGGATC2280.2737094837935174No Hit
CATAGATCACCAGATGCCAGTTGTGCGGAAGACACAGCACACTCTTCTAT2270.2725090036014406No Hit
CATAGAGGCACAGGGATAATGAGGGAGATCTGGGAAAGGTATGTGGCACA2230.26770708283313327No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA2140.25690276110444177No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCCCCAGGTAGCAAAACAGA2110.25330132052821125No Hit
CATAGAAACAGCAAAGCCCTCCACCACCTCTAGAGGAGAATGATATTGTT2100.25210084033613445No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGCCCCAGGTAGCAAAAC2090.25090036014405764No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGCATTCTCTCAG2080.24969987995198079No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT2000.24009603841536614No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTACGGAAGACACAGCACACTCTTC2000.24009603841536614No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGATAGCGAGAAGAGTGGAGGC1930.23169267707082833No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCATGTCGTCA1910.22929171668667467No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCAGGAAACATTGGAAAGATGGGGA1890.22689075630252098No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT1880.2256902761104442No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCGCATTCTCTCAGGGCTGTTC1880.2256902761104442No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTTCAGCTCTTTGAGGCATCTAT1850.22208883553421366No Hit
CATAGAGTGATCCTCCTTTCTCAGCTTACACTGCACATGGGGTCTATGTG1820.2184873949579832No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTACGGCAACATATCAGAAGC1820.2184873949579832No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA1780.21368547418967584No Hit
CATAGATACCTGTCCTCTGCCTCTAGCCAAATTCCTTACCGATCTATGTG1740.20888355342136852No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCACTGAGCTGAGGGTCACTTCTAT1730.20768307322929172No Hit
CATAGATATTCTGCCCCCTCCTCTCCACATAGACCTTTTTCTGTAGTCAA1660.1992797118847539No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGATAGCGAGAAGAGT1640.19687875150060022No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGCAGGGCAGAGAGTGTGTTGT1640.19687875150060022No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGAGGAGAATGATATTGTT1630.1956782713085234No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG1590.1908763505402161No Hit
CATAGAGGCACGATCTTGTTTCACTGTCACTGAGCTGAGGGTCACTTCTA1580.18967587034813926No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAGCTGTCTATGTGTAGAACCATGT1500.18007202881152462No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC1380.16566626650660266No Hit
CATAGATATTCTGCCCCCTCCTCTCCTCCTACGGAAGACACAGCACACTC1360.163265306122449No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGCATTCTCTCAGGGC1330.15966386554621848No Hit
CATAGAGGTGAGCGGCTGTCTCCATCCAGTCCAGCTCCTTCTATGTGTAG1320.15846338535414167No Hit
CATAGACCCCCTTGAGTTCACTGGACTGAGGGTCACTGACAGGTCTTAAA1290.15486194477791118No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTCACTGACAGGTCTTAAAGC1240.148859543817527No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA1230.14765906362545017No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGGATGTGCAATATGGGCTGGG1220.14645858343337334No Hit
CATAGATCACCAGATGCCAGTTGTGCTATGAAGCAGAGGTAGATGGATCA1160.13925570228091239No Hit
CATAGAGGAGAATGATATTGTTGCAGATTTCTATGTGTAGAACCATGTCG1130.13565426170468187No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTATGTGTAGAACCATGTCGTCA1110.1332533013205282No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATTCTCT1070.12845138055222088No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT1010.1212484993997599No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGCCAGGTCTGATTCCTGTTT980.1176470588235294No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG960.11524609843937576No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA940.1128451380552221No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCAGCTACTTGGGAGGCTGAGGCA930.11164465786314526No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCCATTCTCTCAGGGCTGTTCT890.10684273709483792No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGGAGCTGACTTACTGTTCTAT880.1056422569027611No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG870.10444177671068426No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)