FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808017

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808017
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17371
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA224712.93535202348742No Hit
CATAGATATGCCCATGGTTAGGAAGGAAGGATCAATATTGTTAAAATGGG14368.266651315410742No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCA8394.8298888952852455No Hit
CATAGATTGAGCTTAAATGATCTGTGCAAGGTTAAACAATATCCAAATCC8294.772321685567901No Hit
CATAGATGGAGAGAGTGAGGGAAAGGAAATTATGGGAGCCCTGTGAAACG8194.7147544758505555No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGAATTACAGGTGCCCGCCAC4692.6999021357434807No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTTGTATATCT3321.9112313626158541No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGGTCAGGAGATTGAGACCATCCTG2591.4909907316792355No Hit
CATAGATGACTTGGGGGAAAATGGTAGAAACAGCCAGTTTTCCCTTCTAT2281.312532381555466No Hit
CATAGAGGTGAGCGGCTGTCTCCATTCAACTTTCCTTGGCTCTATGTGTA2091.2031546830925106No Hit
CATAGATTGCATAGCCATGTATAGCCCCTAAGCCCAGGTCTATGTGTAGA1861.070750100742617No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAGCCCAGGTCTATGTGTAGA1821.047723216855679No Hit
CATAGAATAGCCAGCAGAAGGAAGCAACCCAAATGGACATTTCACTTATA1771.0189396119970064No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAAGCCCTTGTGAAGTTCTAT1590.9153186345057854No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA1560.898048471590582No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGAAAG1470.8462379828449715No Hit
CATAGAATCCTTTCCCCATTGCTTGCTCATTATTATTGGATGGGATCTAT1160.667779632721202No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGTGCCAC1060.610212423003857No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGCACCAC980.564158655229981No Hit
CATAGATTGCATAGCCATGTGTAGCCATGCTGAAGTCCCATGATCTATGT970.5584019342582465No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGCGATTACAGGCATGCATCAC960.5526452132865121No Hit
CATAGAGGTGAGCGGCTGTCTCCAGATGATATGAACCCAAAGGTCTATGT860.49507800356916704No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTAGGACTACAGGCATGCACCAC850.48932128259743246No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCCGCCAC820.472051119682229No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCAC770.4432675148235565No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTAGGATAACAGGCGTGTACCAC750.43175407288008744No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCCTGCTAT720.41448390996488405No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCCTGCCGC700.402970468021415No Hit
CATAGAGGTGAGCGGCTGTCTCCAAACTGGACAATGAGAGGATCTATGTG680.39145702607794597No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGGAATTAGACTCTTGACATCTATG670.3857003051062115No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCACATGCCAC660.37994358413447704No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGCACCAG660.37994358413447704No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGTGCACCAC650.3741868631627425No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTATAGGCATGCACTGT640.368430142191008No Hit
CATAGACCATCCAGAGGTAATTCTGCTTTATACTCAGATTCTTTCCATAC620.356916700247539No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCTCTACT620.356916700247539No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGAGTAGCTGGGATTACGGGCA600.34540325830407No Hit
CATAGAATAGCCAGCAGAAGGAAGCACACAAAAAGGGCATCTATGTGTAG600.34540325830407No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGTGCACCAC600.34540325830407No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTCCCGCCACCATGTCT580.333889816360601No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGCTCATTATTATTGGATGGGA570.3281330953888665No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTAATACAAAAAATTAG570.3281330953888665No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGTTGGGACCACAGGCGTGTGCCAC500.287836048586725No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGTGTAG490.2820793276149905No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGCATGCCAC470.2705658856715215No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCCGGGATTACAGGCATGCACCAC450.25905244372805253No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGAATGCACCAT450.25905244372805253No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCTGCCAC440.253295722756318No Hit
CATAGATTGAGCTTAAATGATCTGTGCAAGGTTAAGCAATATCCAAATCC420.241782280812849No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGAATTAGAGGCTCCCACCAC410.2360255598411145No Hit
CATAGAATAGCCAGCAGAAGGAAGCATGTCGTCAGTGTCATCACTTATAC400.23026883886938No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAAATTTGTTAAAAGAGG380.218755396925911No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAGGTTTGTCAAAGATCA380.218755396925911No Hit
CATAGAAGTTCTGATCCACATTCACGTATGTGTATAAATTATTTTGGTGC380.218755396925911No Hit
CATAGACCCTTACCAATAACACAATCAACACATATTTTACGTGTTACATA360.20724195498244202No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGGCTACAGGCACGTGCCAC350.2014852340107075No Hit
CATAGACTGCCTCAGCCTCCTGAGTAACTGGGATTACAGGCGTGTGCTAC340.19572851303897298No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGCAACTAGAGGCACGCACCAC340.19572851303897298No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTATGTGCCAC330.18997179206723852No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGAGATTATAGGTACTAATTTT320.184215071095504No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTAGGATTACAGGTGTGCACCAT320.184215071095504No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGCGCATCAC320.184215071095504No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGTGTGCCAC310.1784583501237695No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTATGCACCAC300.172701629152035No Hit
CATAGACTGCCTCAGCCTCCTGAGTAATTAGGACCACAGGTGGACACCAC300.172701629152035No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGCACACCAC300.172701629152035No Hit
CATAGACTGTCATTGCTTGCCCATTGCTCATTATTATTGGATGGGATCTA290.1669449081803005No Hit
CATAGAATCCTTTCCCCATTGCTTGTTCATTATTATTGGATGGGATCTAT290.1669449081803005No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAAGAAGTCAAATTGTCC290.1669449081803005No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCATGCCAC290.1669449081803005No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTAGTGAAATTCCTGAGGTCAGG280.161188187208566No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACGCACCAC260.149674745265097No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGAGCACCAC260.149674745265097No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCAGGGACTCCAGGCACATGCACC260.149674745265097No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGCGCTAC250.1439180242933625No Hit
CATAGACCTCCTGTTTGACCATTTTGAACATAGCCTTTGGGGTTTCTATG240.13816130332162802No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGAGATTACAGGCATGCACCAC240.13816130332162802No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGCCAAGAAGTCAAATTGTCC240.13816130332162802No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAGGTTTGTCAAAGATGA240.13816130332162802No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGCGCATGCCACC230.1324045823498935No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACGTTCCAC230.1324045823498935No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGTTTTTCTCAGGTTTGTCAAA230.1324045823498935No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGTGGCAC220.126647861378159No Hit
CATAGACTGCCTCAGCCTCCTGAGTAACTGGGATTACAGGTACCTGCCAC220.126647861378159No Hit
CATAGACTGCCTCAGCCTCCTGAGTATCTGGGATTACAGGTGCGCATCAC220.126647861378159No Hit
CATAGACATGCTAACATTTCTGGGGATACTAACATTACTGGGGACTGTGA200.11513441943469No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAGCCCAGGTCTAT200.11513441943469No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTATAGGCGCCCGCCAC200.11513441943469No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTATGGGAGCCCGCCAC200.11513441943469No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTGCAGGCGCATGCTTG200.11513441943469No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA200.11513441943469No Hit
CATAGATTGAGCTTAAATGATCTGTGCAAGACTAGGCAATTTACAAATCT190.1093776984629555No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGGCTACTAC190.1093776984629555No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACCACAGGCATGCGCCAC180.10362097749122101No Hit
CATAGACATGCTAACATTTCTGGGGATAGACTTGGTCTCATAGACATGCT180.10362097749122101No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGCCAAAGATCA180.10362097749122101No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGTTTTTCTCAGGTTTGTTGTA180.10362097749122101No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAGGAAGTCAAATTGTCC180.10362097749122101No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGAGATTACAGGCACCCACCAC180.10362097749122101No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGCCCACCAC180.10362097749122101No Hit
CATAGACTGCCTCAGCCTCCTGAGTATCTGGAATTACAGGCGCCAGCCAC180.10362097749122101No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)