FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808018

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808018
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences69389
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3568351.42457738258225No Hit
CATAGAAGAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG32694.7111213592932595No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTAAAGTGCTGTACTT29254.2153655478534064No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCACAGC10831.5607661156667483No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACCAAAAACAATACAAAAAT10441.5045612416953695No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG10181.4670913257144504No Hit
CATAGACACATGTAGGATGGGGTGGAGGATGATCAATGCTGCTTCTATGA7971.1485970398766376No Hit
CATAGAGGGTGCTCCTGTGCTGGGTAGTGGTAGTCTATGAGACCAAGTCT6840.9857470204211042No Hit
CATAGACTTCAGCCCTCACAAGCCTTACCTCAAATGCCAGGCTCTATGAG4600.662929282739339No Hit
CATAGAAGAGTGAGACTTGAGATGGGAGGATAGGTCAAGGTGGGAGGATG3890.5606075890991368No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAACACTGACGACATGGTATATT3890.5606075890991368No Hit
CATAGACACATGTAGGATGGGGTGGCTGGGCATTGCTCTTGACATCTCTA3840.553401836025883No Hit
CATAGAGGGTGCTCCTGTACTGGGTAGTGGTAGTCTATGAGACCAAGTCT3710.5346668780354235No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCACAGCACTTT3010.4337863350098719No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAACTACAAAAAAATT2950.42513943132196746No Hit
CATAGAAGCATGGAAGACAAACAGCATTGAAGTTCTATGTGGAGGATGAT2940.42369828070731674No Hit
CATAGACACATGTAGGATGGGGTGGCTTCCCTTACACCTTCTGCCATGAT2570.37037570796523944No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCCCAGCACTTT2440.3516407499747799No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTATTATCCTAGCACTTT2050.2954358760034011No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGAGGATGATCAATGCTGCTTCTAT1920.2767009180129415No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1830.2637305624810849No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGGAGACAGCCGCTCACC1810.26084826125178345No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTAGTCTATGAGACCAAGTCT1810.26084826125178345No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1740.25076020694922824No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTATAATTCCAGC1740.25076020694922824No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1740.25076020694922824No Hit
CATAGACACATGTAGGATGGGGTGGCCTCTCCTTCACTTTCTGCCATGAT1510.2176137428122613No Hit
CATAGAAGCATGGAAGACAAACAGCATGGCGGTGTTTGCAGATTTGGACC1480.2132902909683091No Hit
CATAGACACATGTAGGATGGGGTGGCTCACGTGTGTAATCTCAGCACTTT1420.20464338728040468No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1420.20464338728040468No Hit
CATAGAGGGTGCTCCTGTACTGGGTGTGCTGGGTAGTGGTAGTCTATGAG1320.1902318811338973No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1310.18879073051924655No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1220.17582037498738995No Hit
CATAGACTTCAGCCCTCACAAGCCTTACACTGCCATCACAGTTCATTGTA1200.17293807375808845No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG1190.17149692314343773No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTATAATTCCAGC1180.17005577252878698No Hit
CATAGATCATGGGACTTCAGCATGGGCATTGCTCTTGACATCTCTATGAG1060.15276196515297813No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAGTAATAGCACTTT1050.1513208145383274No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1050.1513208145383274No Hit
CATAGAGCTATCTGGCAAAAACCCATCAATAAGAATCAGAGGGGTTGGCC1030.14843851330902594No Hit
CATAGAGCTATCTGGCAAAAACCCATCTAAAAAAATACAAACATTAGCCA1020.1469973626943752No Hit
CATAGAAAGTCTGGACCAAGTGCCTCCTACTTCTTTGCCTTTTGCCATGA1020.1469973626943752No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1000.14411506146507372No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG990.14267391085042297No Hit
CATAGAAAATAATGTGGCCGGGCATGGTAGCTCATGCCTGTAATCCCAGT960.13835045900647075No Hit
CATAGACACATGTAGGATGGGGTGGCTGCCTGGCTGGCTTGGCTGTCATG960.13835045900647075No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGCTTTGGACCTGCG950.13690930839182003No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGC940.13546815777716928No Hit
CATAGACACATGTAGGATGGGGTGGCTCCTGTGCTGGGTAGTGGTAGTCT940.13546815777716928No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG920.13258585654786784No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTATATTTTCTAAAGCCTGGG910.1311447059332171No Hit
CATAGAAAAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG900.12970355531856634No Hit
CATAGAGGGTGCTCCTGTACTGGCTGTGCTGGGTAGTGGTAGTCTATGAG880.12682125408926487No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCCCAGC880.12682125408926487No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGCTGTGCTGGGTAGTGGTAGTCTA850.12249780224531266No Hit
CATAGAACCAAAAATGGCTAGGCATGTTGGCTCACACCTGTAATCACAGC810.11673319978670971No Hit
CATAGAGATAAACAAAATAAGACATTACATAGGAGTAAAGTGCTGTACTT810.11673319978670971No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACACAAGATATGAAAAATAA810.11673319978670971No Hit
CATAGACTGGTCTCGAACTCCCAACCTCAGGGTGATCTGCCCACCTTTGC800.11529204917205899No Hit
CATAGAACCAAAAATGGCTAGGCATGTCTATGAGACCAGGTCTGTTCGGC790.11385089855740824No Hit
CATAGAGGTGTCCTTTCCCCACTTTACTCTGTATTTCTCCTTCCTGCCAT790.11385089855740824No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGCCCTGCG770.11096859732810675No Hit
CATAGACACATGTAGGATGGGGTGGCTGGTGTCCCAGGTCGGGAGGCCCT730.10520399486950381No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGGGTGTGTGGTATGTGAGCGAGCT720.10376284425485306No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGTTCACTCCTGTAATCCCAGC710.10232169364020234No Hit
CATAGAACCAAAAATGGCTAGGCATGTGGCTCACACCTGTAATCACAGCA700.1008805430255516No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG700.1008805430255516No Hit
CATAGACACATGTAGGATGGGGTGGGCATTGCTCTTGACATCTCTATGAG700.1008805430255516No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)