FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808019

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808019
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences69389
Sequences flagged as poor quality0
Sequence length150
%GC50

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3506750.536828603957396No Hit
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG32334.659239937165833No Hit
CATAGACTACCACTACCCAGCACAGCTACTTCTCTATGCACTTTGCCACA29264.216806698468057No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGTGATTACAGGTG16772.416809580769286No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTAGCTGAGACCACAGGCA10231.474297078787704No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCCATCCTACATGTGTCTATGT8441.2163311187652222No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCTCTATGTGTAGAACCAT7011.0102465808701668No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCTTGTGAGGGCTGAAGTCTATGTG4280.6168124630705155No Hit
CATAGACCATCCTCCCACCTTGACCTATCCTCCCATCTCAAGTCTCACTC3820.5505195347965816No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACCCCATCCTACATGTGTCTA3810.5490783841819309No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGTG3710.5346668780354235No Hit
CATAGACTACCACTACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT3630.5231376731182176No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTTGCTCTTT3560.5130496188156624No Hit
CATAGAAGCAGCATTGATCATCCTCCACATAGAACTTCAATGCTGTTTGT2920.42081597947801525No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTAGCTGGAACTACAGGAG2870.4136102264047615No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA2850.4107279251754601No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGTGTAAGGGAAGCCAC2440.3516407499747799No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAGAGTGCTGGAATTATAGGCG2230.32137658706711436No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCG2140.30840623153525776No Hit
CATAGACCATCCTCCCACCTTGACCTTCCAAAGTGCTAGGATAATAGGTG2000.28823012293014744No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCAGTACAGGAGCACCCTCTAT1930.2781420686275923No Hit
CATAGCGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1780.2565248094078312No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1660.23923100203202238No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1650.23778985141737163No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1640.23634870080272088No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGGGATAGTTTGAGGGTAATGC1600.23058409834411797No Hit
CATAGAGGTGAGCGGCTGTCTCCACACGTCCGCGCAGAGCCTTCAGGTCA1550.22337834527086428No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1520.21905489342691203No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1510.2176137428122613No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACACACG1480.2132902909683091No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1480.2132902909683091No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAAGTGAAGGAGAGGCCAC1460.21040798973900762No Hit
CATAGACCATCCTCCCACCTTGACCTCCATCTTGACCTCCCAAAGTGCTG1430.2060845378950554No Hit
CATAGACTACCACCACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT1420.20464338728040468No Hit
CATAGACTACCACTACCCAGCACACCCAGTACAGGAGCACCCTCTATGTG1320.1902318811338973No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1300.18734957990459583No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCA1260.18158497744599286No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTAAGGCTTGTGAGGGCTG1250.18014382683134214No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGTCTTCAGGTCA1200.17293807375808845No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1180.17005577252878698No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTATTACTACAGGTG1120.16140886884088257No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGAAGTCCCATGATCTATGTG1080.1556442663822796No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGCGCCTTCAGGTCA1010.14555621207972444No Hit
CATAGAAGGTGATAATCATGACAGCCAAGCCAGCCAGGCAGCCACCCCAT1000.14411506146507372No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAACAGGTACTGGGATTACAGG1000.14411506146507372No Hit
CATAGACTACCACTACCCAGCACAGGAGCCACCCCATCCTACATGTGTCT970.13979160962112153No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA960.13835045900647075No Hit
CATAGACTACCACTACCCAGCACAGCCAGTACAGGAGCACCCTCTATGTG940.13546815777716928No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA930.13402700716251856No Hit
CATAGACTCAAGAAACTTACAATCATGGCAAAAGGCAAAGAAGTAGGAGG910.1311447059332171No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCACCCAGTACAGGAGCACC900.12970355531856634No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGTGCAGAGCCTTCAGGTCA900.12970355531856634No Hit
CATAGACCATCCTCCCACCTTGACCTCTTAAGTAGCTGGGACTACAGGTG900.12970355531856634No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGAG890.1282624047039156No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAAAGGAAGCAAGCATATC850.12249780224531266No Hit
CATAGACTACCACTACCCAGCACAGCCACCCAGTACAGGAGCACCCTCTA840.12105665163066191No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCTGCGCAGAGCCTTCAGGTCA840.12105665163066191No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAACCTTCAGGTCA810.11673319978670971No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGCAAAAAAGAAGCAGG780.1124097479427575No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTAGGATTACAAGTG770.11096859732810675No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGAATTACAGGCA770.11096859732810675No Hit
CATAGAGGTGAGCGGCTGTCTCCACCAGTCCGCGCAGAGCCTTCAGGTCA770.11096859732810675No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTGGCTTGGACTACAGGTG760.10952744671345602No Hit
CATAGACATGAGTGGCCGAACAGACCTGGTCTCATAGACATGCCTAGCCA730.10520399486950381No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)