FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808020

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808020
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74690
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2953839.54746284643192No Hit
CATAGAAGAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG40555.429106975498728No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCACAGC25533.418128263489088No Hit
CATAGAGGGTGCTCCTGTGCTGGGTAGTGGTAGTCTATGAGACCAAGTCT20342.723256125317981No Hit
CATAGACACATGTAGGATGGGGTGGCTGGGCATTGCTCTTGACATCTCTA16312.18369259606373No Hit
CATAGACTTCAGCCCTCACAAGCCTTACCTCAAATGCCAGGCTCTATGAG15112.023028517873879No Hit
CATAGACACATGTAGGATGGGGTGGAGGATGATCAATGCTGCTTCTATGA13441.7994376757263355No Hit
CATAGAGGGTGCTCCTGTACTGGGTAGTGGTAGTCTATGAGACCAAGTCT11711.5678136296693No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTCTGACTGTGTTAATTTAAAAGAA10031.3428839202035077No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTAGTCTATGAGACCAAGTCT7260.9720176730486009No Hit
CATAGAAAATAATGTGGCCGGGCATTGCTCTTGACATCTCTATGAGACCA6930.9278350515463918No Hit
CATAGAGGTGTCCTTTCCCCACTTTACACTGACGACATGGTTCTACACAT5290.7082608113535949No Hit
CATAGACTTCAGCCCTCACAAGCCTTGGTATATTTTCTAAAGCCTGGGAT5230.7002276074441023No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAGTAATAGCACTTT5190.6948721381711073No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCACAGCACTTT4620.6185567010309279No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCCCAGCACTTT4210.5636631409827286No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTATAATTCCAGC4080.5462578658454947No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAATGCCATGATTGTAAGTTTCT3550.47529789797831035No Hit
CATAGACACATGTAGGATGGGGTGGCTTCCCTTACACCTTCTGCCATGAT3190.4270986745213549No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGC3180.4257598072031062No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGAGGATGATCAATGCTGCTTCTAT3040.4070156647476235No Hit
CATAGAAAATAATGTGGCTGGGCATTGCTCTTGACATCTCTATGAGACCA2950.39496585888338465No Hit
CATAGAACCAAAAATGGCTAGGCATGTTGGCTCACACCTGTAATCACAGC2940.39362699156513586No Hit
CATAGAACCAAAAATGGCTAGGCATGTGGCTCACACCTGTAATCACAGCA2910.38961038961038963No Hit
CATAGACACATGTAGGATGGGGTGGCCTCTCCTTCACTTTCTGCCATGAT2880.38559378765564334No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACACTGACGACATG2620.3507832373811755No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTGCTACTGCCATGATTGTAAGTTT2580.3454277681081805No Hit
CATAGACACATGTAGGATGGGGTGGGCATTGCTCTTGACATCTCTATGAG2560.342750033471683No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTCTCTGACTGTGTTA2560.342750033471683No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAATCCTAACACTTT2320.31061721783371266No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCCCAGC2210.2958896773329763No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTCTTGGTCTCTGACT2200.29455081001472755No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTTCCATGTGTGTGCG2160.2891953407417325No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGTTCACTCCTGTAATCCCAGC2070.27714553487749366No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTATATTTTCTAAAGCCTGGG1900.2543847904672647No Hit
CATAGATGAAAGACAAGCAGGGAAGCCAGACAGGATGCGCAGATGGTCTA1880.25170705583076713No Hit
CATAGAAAATAATGTGGCCGGGCATGGTAGCTCATGCCTGTAATCCCAGT1880.25170705583076713No Hit
CATAGAAGCATGGAAGACAAACAGCATGGCGGTGTTTGCAGATTTGGACC1810.24233498460302585No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTATTATCCTAGCACTTT1760.23564064801178203No Hit
CATAGACACATGTAGGATGGGGTGGCTCACGTGTGTAATCTCAGCACTTT1750.23430178069353325No Hit
CATAGAACCAAAAATGGCTAGGCATGGTGGCTCACACCTGTAATCACAGC1680.22492970946579194No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTATATTTTCTAAAGCCTGGGATC1550.20752443432855805No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAATGCCATCACAGTTCATTGTA1550.20752443432855805No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAGTCTATGAGACCAAGTCTCTG1470.19681349578256793No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGACGACATGGTTCTACA1420.19011915919132416No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1300.174052751372339No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1300.174052751372339No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCGTGTCATCCCAGCCCTTT1280.1713750167358415No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGTGCTGGGTAGTGGTAGTCT1230.16468068014459766No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTATAATTCCAGC1230.16468068014459766No Hit
CATAGATCATGGGACTTCAGCATGGCCAGTAGCAAGATAGGACAGAATTC1210.16200294550810015No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1210.16200294550810015No Hit
CATAGAACTCCATCATAAGTCAAAGAGCATTATCCTCTTGCCTCCGTCCC1210.16200294550810015No Hit
CATAGACTTCAGCCCTCACAAGCCTTACACTGACGACATGGTATATTTTC1130.15129200696211006No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAACCCTAGCACTTT1130.15129200696211006No Hit
CATAGAGGTGTCCTTTCCCCACTTTACTCACTCACTTCTCTTCCTGCTGC1120.1499531396438613No Hit
CATAGACACATGTAGGATGGGGTGGCTGTGGAGGCAGCCTGGTCCCTGCC1110.14861427232561253No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1030.13790333377962244No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1010.1352255991431249No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG990.1325478645066274No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTGTAATCCCAGC970.12987012987012986No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGTGTGTGCCTGTAGTCCCAGC930.12451466059713483No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC930.12451466059713483No Hit
AATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG930.12451466059713483No Hit
CATAGAAAGTCTGGACCAAGTGCCTCACAGTTCATTGTATTCTCTATGAG900.12049805864238854No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATACCAGC880.11782032400589101No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG870.11648145668764225No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG860.1151425893693935No Hit
CATAGATCATGGGACTTCAGCATGGGCATTGCTCTTGACATCTCTATGAG850.11380372205114474No Hit
CATAGAACTGTTTAAGAGAAGTCAGCGAGGGAACAAAACTCTATGAGACC850.11380372205114474No Hit
CATAGAACTGTTTAAGAGAAGTCAGCGATGTTCCATGTGTGTGCGATGTT840.11246485473289597No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAATCCCAGCACTTT840.11246485473289597No Hit
CATAGAAAATAATGTGGCCGGGCATGGTACCTCACGCCTATAATCCCAGT840.11246485473289597No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTGTCATCCCAGC830.11112598741464721No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTGACTGTGTTAATTTAAAAGAACA830.11112598741464721No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTACACTGACGACATGGTTCCA810.10844825277814968No Hit
CATAGAGCAGACAAACTTGCAAAAGACTTGGCTGTCATGATTATCACCTT810.10844825277814968No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGTTCACGCCTGTAATCCCAGC800.10710938545990091No Hit
CATAGAAAGTCTGGACCAAGTGCCTTACCTCAAATGCCAGGCTCTATGAG780.1044316508234034No Hit
CATAGAACCAAAAATGGCTAGGCATGGGCATTGCTCTTGACATCTCTATG780.1044316508234034No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGACTCATGCCTGTAATCCCAGC770.10309278350515465No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCGCTTCTGTAATCTCAGC760.10175391618690588No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCCGTAATCCCAGCACTTT750.10041504886865711No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)